RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 FAM208AQ9UK61 1670 aaKnown RBP25.61■■□□□ 1.69
SRRM3-205ENST00000612155 PLIN1O60240 522 aa25.61■■□□□ 1.69
SRRM3-205ENST00000612155 FCHSD2O94868 740 aa25.61■■□□□ 1.69
SRRM3-205ENST00000612155 RRP7AQ9Y3A4 280 aaKnown RBP25.61■■□□□ 1.69
SRRM3-205ENST00000612155 CARD10Q9BWT7 1032 aa25.61■■□□□ 1.69
SRRM3-205ENST00000612155 KDRP35968 1356 aa25.6■■□□□ 1.69
SRRM3-205ENST00000612155 NEUROD2Q15784 382 aa25.6■■□□□ 1.69
SRRM3-205ENST00000612155 RBM19Q9Y4C8 960 aaKnown RBP25.59■■□□□ 1.69
SRRM3-205ENST00000612155 MEGF6O75095 1541 aa25.58■■□□□ 1.69
SRRM3-205ENST00000612155 RUNDC1Q96C34 613 aa25.57■■□□□ 1.68
SRRM3-205ENST00000612155 CCDC136Q96JN2 1154 aa25.57■■□□□ 1.68
SRRM3-205ENST00000612155 SPATA31A1Q5TZJ5 1347 aa25.57■■□□□ 1.68
SRRM3-205ENST00000612155 SPATA31A5Q5VU36 1347 aa25.56■■□□□ 1.68
SRRM3-205ENST00000612155 SPATA31A7Q8IWB4 1347 aa25.56■■□□□ 1.68
SRRM3-205ENST00000612155 NCAPD2Q15021 1401 aa25.56■■□□□ 1.68
SRRM3-205ENST00000612155 TCP11L2Q8N4U5 519 aa25.56■■□□□ 1.68
SRRM3-205ENST00000612155 VPS72Q15906 364 aa25.55■■□□□ 1.68
SRRM3-205ENST00000612155 RAPGEF4Q8WZA2 1011 aa25.55■■□□□ 1.68
SRRM3-205ENST00000612155 MAPK8IP3Q9UPT6 1336 aa25.55■■□□□ 1.68
SRRM3-205ENST00000612155 QTRT2Q9H974 415 aaKnown RBP25.54■■□□□ 1.68
SRRM3-205ENST00000612155 FAM98CQ17RN3 349 aaKnown RBP25.54■■□□□ 1.68
SRRM3-205ENST00000612155 MTHFSDQ2M296 383 aaKnown RBP25.53■■□□□ 1.68
SRRM3-205ENST00000612155 WWC1Q8IX03 1113 aa25.52■■□□□ 1.68
SRRM3-205ENST00000612155 IL2RBP14784 551 aa25.51■■□□□ 1.67
SRRM3-205ENST00000612155 TATP17735 454 aaPredicted RBP25.51■■□□□ 1.67
SRRM3-205ENST00000612155 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.51■■□□□ 1.67
SRRM3-205ENST00000612155 C20orf194Q5TEA3 1177 aa25.51■■□□□ 1.67
SRRM3-205ENST00000612155 RGS17Q9UGC6 210 aaPredicted RBP25.51■■□□□ 1.67
SRRM3-205ENST00000612155 NGEFQ8N5V2 710 aa25.5■■□□□ 1.67
SRRM3-205ENST00000612155 NEFMP07197 916 aa25.49■■□□□ 1.67
SRRM3-205ENST00000612155 GJD4Q96KN9 370 aaPredicted RBP25.49■■□□□ 1.67
SRRM3-205ENST00000612155 PHF23Q9BUL5 403 aaPredicted RBP25.49■■□□□ 1.67
SRRM3-205ENST00000612155 TRPC5Q9UL62 973 aaPredicted RBP25.49■■□□□ 1.67
SRRM3-205ENST00000612155 PNNQ9H307 717 aaKnown RBP25.49■■□□□ 1.67
SRRM3-205ENST00000612155 ATRNO75882 1429 aa25.49■■□□□ 1.67
SRRM3-205ENST00000612155 A0A0G2JS52 829 aa25.48■■□□□ 1.67
SRRM3-205ENST00000612155 TMPOP42166 694 aaKnown RBP25.48■■□□□ 1.67
SRRM3-205ENST00000612155 CRBNQ96SW2 442 aa25.48■■□□□ 1.67
SRRM3-205ENST00000612155 E9PSI1 815 aa25.48■■□□□ 1.67
SRRM3-205ENST00000612155 GLI3P10071 1580 aa25.47■■□□□ 1.67
SRRM3-205ENST00000612155 RIPK4P57078 832 aa25.46■■□□□ 1.67
SRRM3-205ENST00000612155 DCTN1Q14203 1278 aa25.45■■□□□ 1.67
SRRM3-205ENST00000612155 OVOS2A0A0G2JMS6 1433 aa25.45■■□□□ 1.66
SRRM3-205ENST00000612155 DISP2A7MBM2 1401 aa25.45■■□□□ 1.66
SRRM3-205ENST00000612155 NFE2L2Q16236 605 aa25.45■■□□□ 1.66
SRRM3-205ENST00000612155 ZNF530Q6P9A1 599 aaPredicted RBP25.45■■□□□ 1.66
SRRM3-205ENST00000612155 PLEKHO1Q53GL0 409 aaPredicted RBP25.44■■□□□ 1.66
SRRM3-205ENST00000612155 ZNF772Q68DY9 489 aaPredicted RBP25.44■■□□□ 1.66
SRRM3-205ENST00000612155 DDX54Q8TDD1 881 aaKnown RBP25.44■■□□□ 1.66
SRRM3-205ENST00000612155 THUMPD2Q9BTF0 503 aaKnown RBP25.44■■□□□ 1.66
SRRM3-205ENST00000612155 ZCRB1Q8TBF4 217 aaKnown RBP25.43■■□□□ 1.66
SRRM3-205ENST00000612155 THRAP3Q9Y2W1 955 aaKnown RBP25.43■■□□□ 1.66
SRRM3-205ENST00000612155 DLG5Q8TDM6 1919 aa25.43■■□□□ 1.66
SRRM3-205ENST00000612155 PARP4Q9UKK3 1724 aaKnown RBP25.43■■□□□ 1.66
SRRM3-205ENST00000612155 POTEAQ6S8J7 498 aa25.42■■□□□ 1.66
SRRM3-205ENST00000612155 WNK3Q9BYP7 1800 aa25.42■■□□□ 1.66
SRRM3-205ENST00000612155 CYP27B1O15528 508 aa25.41■■□□□ 1.66
SRRM3-205ENST00000612155 BARGINQ6ZT62 677 aa25.41■■□□□ 1.66
SRRM3-205ENST00000612155 TRIM35Q9UPQ4 493 aa25.41■■□□□ 1.66
SRRM3-205ENST00000612155 MCM10Q7L590 875 aa25.41■■□□□ 1.66
SRRM3-205ENST00000612155 AMOTQ4VCS5 1084 aa25.4■■□□□ 1.66
SRRM3-205ENST00000612155 SPG7Q9UQ90 795 aa25.4■■□□□ 1.66
SRRM3-205ENST00000612155 MPRIPQ6WCQ1 1025 aa25.39■■□□□ 1.66
SRRM3-205ENST00000612155 GAS2L2Q8NHY3 880 aa25.39■■□□□ 1.66
SRRM3-205ENST00000612155 EXOC5O00471 708 aa25.38■■□□□ 1.65
SRRM3-205ENST00000612155 BCAR3O75815 825 aa25.38■■□□□ 1.65
SRRM3-205ENST00000612155 DDB1Q16531 1140 aa25.38■■□□□ 1.65
SRRM3-205ENST00000612155 EP400Q96L91 3159 aa25.38■■□□□ 1.65
SRRM3-205ENST00000612155 PKD1L3Q7Z443 1732 aa25.38■■□□□ 1.65
SRRM3-205ENST00000612155 SHANK3Q9BYB0 1731 aa25.38■■□□□ 1.65
SRRM3-205ENST00000612155 CCDC27Q2M243 656 aa25.38■■□□□ 1.65
SRRM3-205ENST00000612155 FAM182BQ5T319 152 aa25.38■■□□□ 1.65
SRRM3-205ENST00000612155 LGR6Q9HBX8 967 aa25.37■■□□□ 1.65
SRRM3-205ENST00000612155 PHKG2P15735 406 aa25.37■■□□□ 1.65
SRRM3-205ENST00000612155 C1orf141Q5JVX7 400 aa25.37■■□□□ 1.65
SRRM3-205ENST00000612155 LRRC37A3O60309 1634 aa25.36■■□□□ 1.65
SRRM3-205ENST00000612155 GNAT3A8MTJ3 354 aa25.35■■□□□ 1.65
SRRM3-205ENST00000612155 WDR63Q8IWG1 891 aa25.35■■□□□ 1.65
SRRM3-205ENST00000612155 SEPT12Q8IYM1 358 aa25.35■■□□□ 1.65
SRRM3-205ENST00000612155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.35■■□□□ 1.65
SRRM3-205ENST00000612155 MAP3K5Q99683 1374 aa25.35■■□□□ 1.65
SRRM3-205ENST00000612155 RBM6P78332 1123 aaKnown RBP25.34■■□□□ 1.65
SRRM3-205ENST00000612155 AKAP4Q5JQC9 854 aa25.34■■□□□ 1.65
SRRM3-205ENST00000612155 PCDH11XQ9BZA7 1347 aa25.34■■□□□ 1.65
SRRM3-205ENST00000612155 PCDH11YQ9BZA8 1340 aa25.34■■□□□ 1.65
SRRM3-205ENST00000612155 IFNL2Q8IZJ0 200 aa25.34■■□□□ 1.65
SRRM3-205ENST00000612155 IL17REQ8NFR9 667 aa25.34■■□□□ 1.65
SRRM3-205ENST00000612155 NCBP3Q53F19 620 aaKnown RBP25.33■■□□□ 1.65
SRRM3-205ENST00000612155 CDCA7Q9BWT1 371 aaPredicted RBP25.33■■□□□ 1.65
SRRM3-205ENST00000612155 TNS2Q63HR2 1409 aa25.33■■□□□ 1.65
SRRM3-205ENST00000612155 RXRBP28702 533 aa25.32■■□□□ 1.64
SRRM3-205ENST00000612155 MARCH10Q8NA82 808 aaPredicted RBP25.32■■□□□ 1.64
SRRM3-205ENST00000612155 RTF1Q92541 710 aaKnown RBP25.32■■□□□ 1.64
SRRM3-205ENST00000612155 THSD7AQ9UPZ6 1657 aa25.32■■□□□ 1.64
SRRM3-205ENST00000612155 ONECUT3O60422 494 aaPredicted RBP25.3■■□□□ 1.64
SRRM3-205ENST00000612155 KDM6AO15550 1401 aaPredicted RBP25.29■■□□□ 1.64
SRRM3-205ENST00000612155 LAS1LQ9Y4W2 734 aaKnown RBP25.29■■□□□ 1.64
SRRM3-205ENST00000612155 KAT6BQ8WYB5 2073 aa25.28■■□□□ 1.64
SRRM3-205ENST00000612155 RNMTO43148 476 aaKnown RBP25.28■■□□□ 1.64
SRRM3-205ENST00000612155 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms