RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 KIF3AQ9Y496 699 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 ARHGAP45Q92619 1136 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 APPP05067 770 aa15.9■□□□□ 0.14
TCF3-220ENST00000611869 SBNO2Q9Y2G9 1366 aa15.9■□□□□ 0.14
TCF3-220ENST00000611869 PTPRCP08575 1304 aa15.9■□□□□ 0.14
TCF3-220ENST00000611869 KCNA6P17658 529 aa15.9■□□□□ 0.14
TCF3-220ENST00000611869 TTC21AQ8NDW8 1320 aa15.9■□□□□ 0.14
TCF3-220ENST00000611869 SF3A1Q15459 793 aaKnown RBP15.89■□□□□ 0.13
TCF3-220ENST00000611869 MTHFSDQ2M296 383 aaKnown RBP15.89■□□□□ 0.13
TCF3-220ENST00000611869 ERC1Q8IUD2 1116 aa15.89■□□□□ 0.13
TCF3-220ENST00000611869 ISY1Q9ULR0 285 aaKnown RBP15.89■□□□□ 0.13
TCF3-220ENST00000611869 MX1P20591 662 aa15.89■□□□□ 0.13
TCF3-220ENST00000611869 MCM4P33991 863 aa15.89■□□□□ 0.13
TCF3-220ENST00000611869 AACSQ86V21 672 aa15.89■□□□□ 0.13
TCF3-220ENST00000611869 TBC1D32Q96NH3 1257 aa15.89■□□□□ 0.13
TCF3-220ENST00000611869 FAM177BA6PVY3 158 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 BMP2KLQ5H9B9 411 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 TSHZ3Q63HK5 1081 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 TBC1D9Q6ZT07 1266 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 BCORL1Q5H9F3 1711 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 NRDCO43847 1150 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 FOSBP53539 338 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 NUCB1Q02818 461 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 LRRFIP1Q32MZ4 808 aaKnown RBP15.88■□□□□ 0.13
TCF3-220ENST00000611869 MAP3K19Q56UN5 1328 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 PRPF40AO75400 957 aaKnown RBP15.88■□□□□ 0.13
TCF3-220ENST00000611869 WASHC4Q2M389 1173 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 CAVIN1Q6NZI2 390 aaKnown RBP15.88■□□□□ 0.13
TCF3-220ENST00000611869 CWC27Q6UX04 472 aaKnown RBP15.88■□□□□ 0.13
TCF3-220ENST00000611869 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 INSRP06213 1382 aa15.88■□□□□ 0.13
TCF3-220ENST00000611869 ZFYVE9O95405 1425 aa15.87■□□□□ 0.13
TCF3-220ENST00000611869 SEC24BO95487 1268 aa15.87■□□□□ 0.13
TCF3-220ENST00000611869 IL13P35225 146 aa15.87■□□□□ 0.13
TCF3-220ENST00000611869 PRDM15P57071 1507 aaPredicted RBP15.87■□□□□ 0.13
TCF3-220ENST00000611869 AMOTQ4VCS5 1084 aa15.87■□□□□ 0.13
TCF3-220ENST00000611869 ZFYVE16Q7Z3T8 1539 aa15.87■□□□□ 0.13
TCF3-220ENST00000611869 DNAAF4Q8WXU2 420 aa15.87■□□□□ 0.13
TCF3-220ENST00000611869 ZBTB40Q9NUA8 1239 aa15.87■□□□□ 0.13
TCF3-220ENST00000611869 EYA1Q99502 592 aa15.86■□□□□ 0.13
TCF3-220ENST00000611869 PTCD1O75127 700 aaKnown RBP15.86■□□□□ 0.13
TCF3-220ENST00000611869 MCM2P49736 904 aa15.86■□□□□ 0.13
TCF3-220ENST00000611869 CHAF1AQ13111 956 aaPredicted RBP15.86■□□□□ 0.13
TCF3-220ENST00000611869 UPF3BQ9BZI7 483 aaKnown RBP15.86■□□□□ 0.13
TCF3-220ENST00000611869 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
TCF3-220ENST00000611869 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
TCF3-220ENST00000611869 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
TCF3-220ENST00000611869 IL27Q8NEV9 243 aa15.85■□□□□ 0.13
TCF3-220ENST00000611869 KIF1BPQ96EK5 621 aa15.85■□□□□ 0.13
TCF3-220ENST00000611869 KDM5AP29375 1690 aaKnown RBP15.85■□□□□ 0.13
TCF3-220ENST00000611869 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.84■□□□□ 0.13
TCF3-220ENST00000611869 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
TCF3-220ENST00000611869 RNF214Q8ND24 703 aa15.84■□□□□ 0.13
TCF3-220ENST00000611869 MRE11P49959 708 aa15.84■□□□□ 0.13
TCF3-220ENST00000611869 ANKRD24Q8TF21 1146 aa15.84■□□□□ 0.13
TCF3-220ENST00000611869 DBF4Q9UBU7 674 aaPredicted RBP15.84■□□□□ 0.13
TCF3-220ENST00000611869 CPLX1O14810 134 aa15.84■□□□□ 0.13
TCF3-220ENST00000611869 TBX22Q9Y458 520 aa15.84■□□□□ 0.13
TCF3-220ENST00000611869 FLT4P35916 1363 aa15.84■□□□□ 0.13
TCF3-220ENST00000611869 CHRNA2Q15822 529 aa15.83■□□□□ 0.13
TCF3-220ENST00000611869 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.83■□□□□ 0.13
TCF3-220ENST00000611869 C16orf71Q8IYS4 520 aaPredicted RBP15.83■□□□□ 0.12
TCF3-220ENST00000611869 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
TCF3-220ENST00000611869 PLXNC1O60486 1568 aa15.83■□□□□ 0.12
TCF3-220ENST00000611869 TULP1O00294 542 aaPredicted RBP15.82■□□□□ 0.12
TCF3-220ENST00000611869 PSMA5P28066 241 aa15.82■□□□□ 0.12
TCF3-220ENST00000611869 SMC5Q8IY18 1101 aa15.82■□□□□ 0.12
TCF3-220ENST00000611869 CCDC85AQ96PX6 553 aaPredicted RBP15.82■□□□□ 0.12
TCF3-220ENST00000611869 EDC4Q6P2E9 1401 aaKnown RBP15.82■□□□□ 0.12
TCF3-220ENST00000611869 MYOM2P54296 1465 aa15.82■□□□□ 0.12
TCF3-220ENST00000611869 LTKP29376 864 aa15.82■□□□□ 0.12
TCF3-220ENST00000611869 BICD2Q8TD16 824 aa15.82■□□□□ 0.12
TCF3-220ENST00000611869 CDC42BPBQ9Y5S2 1711 aa15.82■□□□□ 0.12
TCF3-220ENST00000611869 IQGAP3Q86VI3 1631 aa15.82■□□□□ 0.12
TCF3-220ENST00000611869 TRDNQ13061 729 aa15.82■□□□□ 0.12
TCF3-220ENST00000611869 ANKRD44Q8N8A2 993 aa15.82■□□□□ 0.12
TCF3-220ENST00000611869 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
TCF3-220ENST00000611869 PPP1R42Q7Z4L9 355 aa15.81■□□□□ 0.12
TCF3-220ENST00000611869 HIP1O00291 1037 aa15.81■□□□□ 0.12
TCF3-220ENST00000611869 MYD88Q99836 296 aa15.81■□□□□ 0.12
TCF3-220ENST00000611869 CWC22Q9HCG8 908 aaKnown RBP15.81■□□□□ 0.12
TCF3-220ENST00000611869 ZNF521Q96K83 1311 aa15.81■□□□□ 0.12
TCF3-220ENST00000611869 FIBPO43427 364 aa15.8■□□□□ 0.12
TCF3-220ENST00000611869 TTC22Q5TAA0 569 aa15.8■□□□□ 0.12
TCF3-220ENST00000611869 KIF6Q6ZMV9 814 aa15.8■□□□□ 0.12
TCF3-220ENST00000611869 NASPP49321 788 aaPredicted RBP15.8■□□□□ 0.12
TCF3-220ENST00000611869 LARP1Q6PKG0 1096 aaKnown RBP15.8■□□□□ 0.12
TCF3-220ENST00000611869 CPLX2Q6PUV4 134 aaKnown RBP15.8■□□□□ 0.12
TCF3-220ENST00000611869 CHPF2Q9P2E5 772 aa15.8■□□□□ 0.12
TCF3-220ENST00000611869 CYP46A1Q9Y6A2 500 aa15.8■□□□□ 0.12
TCF3-220ENST00000611869 MAP3K2Q9Y2U5 619 aa15.8■□□□□ 0.12
TCF3-220ENST00000611869 RALYLQ86SE5 291 aaKnown RBP15.79■□□□□ 0.12
TCF3-220ENST00000611869 ZBTB7BO15156 539 aaPredicted RBP15.79■□□□□ 0.12
TCF3-220ENST00000611869 RAB11FIP3O75154 756 aa15.79■□□□□ 0.12
TCF3-220ENST00000611869 CCDC8Q9H0W5 538 aaPredicted RBP15.79■□□□□ 0.12
TCF3-220ENST00000611869 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
TCF3-220ENST00000611869 GLRX3O76003 335 aaKnown RBP15.79■□□□□ 0.12
TCF3-220ENST00000611869 ARID3AQ99856 593 aa15.79■□□□□ 0.12
TCF3-220ENST00000611869 BOLA2Q9H3K6 86 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms