RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 MEGF6O75095 1541 aa29.04■■■□□ 2.24
UBE3C-209ENST00000611269 RAPGEF4Q8WZA2 1011 aa29.04■■■□□ 2.24
UBE3C-209ENST00000611269 NFE2L2Q16236 605 aa29.03■■■□□ 2.24
UBE3C-209ENST00000611269 USP21Q9UK80 565 aa29.03■■■□□ 2.24
UBE3C-209ENST00000611269 DLG5Q8TDM6 1919 aa29.02■■■□□ 2.24
UBE3C-209ENST00000611269 GOLGA2Q08379 1002 aa29.02■■■□□ 2.24
UBE3C-209ENST00000611269 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.02■■■□□ 2.24
UBE3C-209ENST00000611269 MTHFSDQ2M296 383 aaKnown RBP29.02■■■□□ 2.24
UBE3C-209ENST00000611269 AFF2P51816 1311 aa29.01■■■□□ 2.24
UBE3C-209ENST00000611269 TATP17735 454 aaPredicted RBP29■■■□□ 2.23
UBE3C-209ENST00000611269 RIPK4P57078 832 aa29■■■□□ 2.23
UBE3C-209ENST00000611269 RRP1P56182 461 aaKnown RBP29■■■□□ 2.23
UBE3C-209ENST00000611269 SPATA31A1Q5TZJ5 1347 aa28.99■■■□□ 2.23
UBE3C-209ENST00000611269 PARP4Q9UKK3 1724 aaKnown RBP28.99■■■□□ 2.23
UBE3C-209ENST00000611269 CCDC9Q9Y3X0 531 aaKnown RBP28.98■■■□□ 2.23
UBE3C-209ENST00000611269 SPATA31A5Q5VU36 1347 aa28.98■■■□□ 2.23
UBE3C-209ENST00000611269 SPATA31A7Q8IWB4 1347 aa28.98■■■□□ 2.23
UBE3C-209ENST00000611269 IL2RBP14784 551 aa28.97■■■□□ 2.23
UBE3C-209ENST00000611269 GAS2L2Q8NHY3 880 aa28.97■■■□□ 2.23
UBE3C-209ENST00000611269 VPS72Q15906 364 aa28.97■■■□□ 2.23
UBE3C-209ENST00000611269 PLEKHO1Q53GL0 409 aaPredicted RBP28.97■■■□□ 2.23
UBE3C-209ENST00000611269 DUSP27Q5VZP5 1158 aa28.97■■■□□ 2.23
UBE3C-209ENST00000611269 TRMT2AQ8IZ69 625 aaKnown RBP28.97■■■□□ 2.23
UBE3C-209ENST00000611269 SLFN5Q08AF3 891 aa28.96■■■□□ 2.23
UBE3C-209ENST00000611269 AMOTQ4VCS5 1084 aa28.96■■■□□ 2.23
UBE3C-209ENST00000611269 OVOS2A0A0G2JMS6 1433 aa28.96■■■□□ 2.23
UBE3C-209ENST00000611269 WNK3Q9BYP7 1800 aa28.96■■■□□ 2.23
UBE3C-209ENST00000611269 TRIM35Q9UPQ4 493 aa28.95■■■□□ 2.23
UBE3C-209ENST00000611269 CCDC27Q2M243 656 aa28.95■■■□□ 2.22
UBE3C-209ENST00000611269 NCBP3Q53F19 620 aaKnown RBP28.95■■■□□ 2.22
UBE3C-209ENST00000611269 WWC1Q8IX03 1113 aa28.95■■■□□ 2.22
UBE3C-209ENST00000611269 PHF23Q9BUL5 403 aaPredicted RBP28.95■■■□□ 2.22
UBE3C-209ENST00000611269 PKD1L3Q7Z443 1732 aa28.95■■■□□ 2.22
UBE3C-209ENST00000611269 PLEKHG2Q9H7P9 1386 aa28.94■■■□□ 2.22
UBE3C-209ENST00000611269 DISP2A7MBM2 1401 aa28.92■■■□□ 2.22
UBE3C-209ENST00000611269 ZNF530Q6P9A1 599 aaPredicted RBP28.92■■■□□ 2.22
UBE3C-209ENST00000611269 THRAP3Q9Y2W1 955 aaKnown RBP28.92■■■□□ 2.22
UBE3C-209ENST00000611269 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.91■■■□□ 2.223e-7■■■□□ 17.6
UBE3C-209ENST00000611269 SPG7Q9UQ90 795 aa28.91■■■□□ 2.22
UBE3C-209ENST00000611269 TSHZ2Q9NRE2 1034 aa28.89■■■□□ 2.22
UBE3C-209ENST00000611269 LMOD3Q0VAK6 560 aa28.89■■■□□ 2.21
UBE3C-209ENST00000611269 MAP3K5Q99683 1374 aa28.89■■■□□ 2.21
UBE3C-209ENST00000611269 ATRNO75882 1429 aa28.88■■■□□ 2.21
UBE3C-209ENST00000611269 GNAT3A8MTJ3 354 aa28.88■■■□□ 2.21
UBE3C-209ENST00000611269 E9PSI1 815 aa28.88■■■□□ 2.21
UBE3C-209ENST00000611269 ZCRB1Q8TBF4 217 aaKnown RBP28.88■■■□□ 2.21
UBE3C-209ENST00000611269 DCTN1Q14203 1278 aa28.87■■■□□ 2.21
UBE3C-209ENST00000611269 B4GALNT3Q6L9W6 998 aa28.87■■■□□ 2.21
UBE3C-209ENST00000611269 BARGINQ6ZT62 677 aa28.87■■■□□ 2.21
UBE3C-209ENST00000611269 SHANK3Q9BYB0 1731 aa28.87■■■□□ 2.21
UBE3C-209ENST00000611269 TRPC5Q9UL62 973 aaPredicted RBP28.87■■■□□ 2.21
UBE3C-209ENST00000611269 AKAP4Q5JQC9 854 aa28.86■■■□□ 2.21
UBE3C-209ENST00000611269 C1orf141Q5JVX7 400 aa28.86■■■□□ 2.21
UBE3C-209ENST00000611269 THUMPD2Q9BTF0 503 aaKnown RBP28.86■■■□□ 2.21
UBE3C-209ENST00000611269 MCM10Q7L590 875 aa28.85■■■□□ 2.21
UBE3C-209ENST00000611269 RTF1Q92541 710 aaKnown RBP28.85■■■□□ 2.21
UBE3C-209ENST00000611269 CDCA7Q9BWT1 371 aaPredicted RBP28.85■■■□□ 2.21
UBE3C-209ENST00000611269 GLI3P10071 1580 aa28.85■■■□□ 2.21
UBE3C-209ENST00000611269 FAM98CQ17RN3 349 aaKnown RBP28.84■■■□□ 2.21
UBE3C-209ENST00000611269 WDR63Q8IWG1 891 aa28.84■■■□□ 2.21
UBE3C-209ENST00000611269 GJD4Q96KN9 370 aaPredicted RBP28.84■■■□□ 2.21
UBE3C-209ENST00000611269 CYP27B1O15528 508 aa28.83■■■□□ 2.21
UBE3C-209ENST00000611269 QTRT2Q9H974 415 aaKnown RBP28.83■■■□□ 2.21
UBE3C-209ENST00000611269 PCDH11XQ9BZA7 1347 aa28.83■■■□□ 2.21
UBE3C-209ENST00000611269 PCDH11YQ9BZA8 1340 aa28.83■■■□□ 2.21
UBE3C-209ENST00000611269 HTATSF1O43719 755 aaKnown RBP28.83■■■□□ 2.2
UBE3C-209ENST00000611269 PHKG2P15735 406 aa28.83■■■□□ 2.2
UBE3C-209ENST00000611269 SPINK5Q9NQ38 1064 aaPredicted RBP28.83■■■□□ 2.2
UBE3C-209ENST00000611269 IFNL2Q8IZJ0 200 aa28.82■■■□□ 2.2
UBE3C-209ENST00000611269 VIRMAQ69YN4 1812 aaKnown RBP28.82■■■□□ 2.2
UBE3C-209ENST00000611269 LRRC37A3O60309 1634 aa28.81■■■□□ 2.2
UBE3C-209ENST00000611269 MPRIPQ6WCQ1 1025 aa28.8■■■□□ 2.2
UBE3C-209ENST00000611269 ILDR1Q86SU0 546 aaPredicted RBP28.8■■■□□ 2.2
UBE3C-209ENST00000611269 IL17REQ8NFR9 667 aa28.8■■■□□ 2.2
UBE3C-209ENST00000611269 EXOC5O00471 708 aa28.79■■■□□ 2.2
UBE3C-209ENST00000611269 ZNF772Q68DY9 489 aaPredicted RBP28.79■■■□□ 2.2
UBE3C-209ENST00000611269 DDX54Q8TDD1 881 aaKnown RBP28.79■■■□□ 2.2
UBE3C-209ENST00000611269 TNS2Q63HR2 1409 aa28.79■■■□□ 2.2
UBE3C-209ENST00000611269 LGR6Q9HBX8 967 aa28.78■■■□□ 2.2
UBE3C-209ENST00000611269 DDB1Q16531 1140 aa28.77■■■□□ 2.2
UBE3C-209ENST00000611269 CCDC136Q96JN2 1154 aa28.77■■■□□ 2.2
UBE3C-209ENST00000611269 CALD1Q05682 793 aaKnown RBP28.76■■■□□ 2.2
UBE3C-209ENST00000611269 THSD7AQ9UPZ6 1657 aa28.76■■■□□ 2.2
UBE3C-209ENST00000611269 ADAMTS7Q9UKP4 1686 aa28.76■■■□□ 2.19
UBE3C-209ENST00000611269 SCN11AQ9UI33 1791 aa28.76■■■□□ 2.19
UBE3C-209ENST00000611269 KDM6AO15550 1401 aaPredicted RBP28.75■■■□□ 2.19
UBE3C-209ENST00000611269 CEMIPQ8WUJ3 1361 aa28.75■■■□□ 2.19
UBE3C-209ENST00000611269 IL16Q14005 1332 aa28.75■■■□□ 2.19
UBE3C-209ENST00000611269 EXOC6Q8TAG9 804 aa28.75■■■□□ 2.19
UBE3C-209ENST00000611269 A0A0G2JS52 829 aa28.74■■■□□ 2.19
UBE3C-209ENST00000611269 RNMTO43148 476 aaKnown RBP28.74■■■□□ 2.19
UBE3C-209ENST00000611269 MYT1Q01538 1121 aa28.74■■■□□ 2.19
UBE3C-209ENST00000611269 HSP90AB1P08238 724 aaKnown RBP28.73■■■□□ 2.19
UBE3C-209ENST00000611269 DCAF5Q96JK2 942 aa28.72■■■□□ 2.19
UBE3C-209ENST00000611269 LAS1LQ9Y4W2 734 aaKnown RBP28.72■■■□□ 2.19
UBE3C-209ENST00000611269 PLIN1O60240 522 aa28.72■■■□□ 2.19
UBE3C-209ENST00000611269 NKX1-1Q15270 411 aaPredicted RBP28.7■■■□□ 2.19
UBE3C-209ENST00000611269 IFT57Q9NWB7 429 aa28.7■■■□□ 2.19
UBE3C-209ENST00000611269 RGS17Q9UGC6 210 aaPredicted RBP28.7■■■□□ 2.19
UBE3C-209ENST00000611269 ONECUT3O60422 494 aaPredicted RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms