RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PIK3C2AO00443 1686 aa13.09□□□□□ -0.31
PABPC1-224ENST00000610907 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
PABPC1-224ENST00000610907 RGPD8O14715 1765 aaPredicted RBP13.08□□□□□ -0.31
PABPC1-224ENST00000610907 NLRP6P59044 892 aa13.08□□□□□ -0.32
PABPC1-224ENST00000610907 MCM10Q7L590 875 aa13.08□□□□□ -0.32
PABPC1-224ENST00000610907 RPAP2Q8IXW5 612 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-224ENST00000610907 BABAM1Q9NWV8 329 aa13.08□□□□□ -0.32
PABPC1-224ENST00000610907 MTHFSDQ2M296 383 aaKnown RBP13.07□□□□□ -0.32
PABPC1-224ENST00000610907 ANKRD45Q5TZF3 282 aa13.07□□□□□ -0.32
PABPC1-224ENST00000610907 ANKLE2Q86XL3 938 aa13.07□□□□□ -0.32
PABPC1-224ENST00000610907 EYA1Q99502 592 aa13.07□□□□□ -0.32
PABPC1-224ENST00000610907 LNPKQ9C0E8 428 aa13.07□□□□□ -0.32
PABPC1-224ENST00000610907 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
PABPC1-224ENST00000610907 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
PABPC1-224ENST00000610907 SIRT2Q8IXJ6 389 aa13.07□□□□□ -0.32
PABPC1-224ENST00000610907 DCTPP1Q9H773 170 aa13.07□□□□□ -0.32
PABPC1-224ENST00000610907 RBM25P49756 843 aaKnown RBP13.06□□□□□ -0.32
PABPC1-224ENST00000610907 CHD2O14647 1828 aaKnown RBP13.05□□□□□ -0.32
PABPC1-224ENST00000610907 RGS12O14924 1447 aa13.05□□□□□ -0.32
PABPC1-224ENST00000610907 HOXC9P31274 260 aa13.05□□□□□ -0.32
PABPC1-224ENST00000610907 ANKRD44Q8N8A2 993 aa13.05□□□□□ -0.32
PABPC1-224ENST00000610907 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
PABPC1-224ENST00000610907 SOX12O15370 315 aa13.04□□□□□ -0.32
PABPC1-224ENST00000610907 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
PABPC1-224ENST00000610907 TSPYL4Q9UJ04 414 aa13.04□□□□□ -0.32
PABPC1-224ENST00000610907 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-224ENST00000610907 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
PABPC1-224ENST00000610907 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
PABPC1-224ENST00000610907 ANTXR1Q9H6X2 564 aa13.03□□□□□ -0.32
PABPC1-224ENST00000610907 C1orf115Q9H7X2 142 aa13.03□□□□□ -0.32
PABPC1-224ENST00000610907 PHF8Q9UPP1 1060 aa13.03□□□□□ -0.32
PABPC1-224ENST00000610907 MARF1Q9Y4F3 1742 aaKnown RBP13.03□□□□□ -0.32
PABPC1-224ENST00000610907 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
PABPC1-224ENST00000610907 CCT4P50991 539 aaKnown RBP13.03□□□□□ -0.32
PABPC1-224ENST00000610907 LRRC37A3O60309 1634 aa13.02□□□□□ -0.33
PABPC1-224ENST00000610907 GSE1Q14687 1217 aa13.02□□□□□ -0.33
PABPC1-224ENST00000610907 CHMP4AQ9BY43 222 aa13.02□□□□□ -0.33
PABPC1-224ENST00000610907 FOXO3O43524 673 aa13.01□□□□□ -0.33
PABPC1-224ENST00000610907 KRT24Q2M2I5 525 aa13.01□□□□□ -0.33
PABPC1-224ENST00000610907 SNX21Q969T3 373 aa13.01□□□□□ -0.33
PABPC1-224ENST00000610907 STK31Q9BXU1 1019 aa13.01□□□□□ -0.33
PABPC1-224ENST00000610907 NWD1Q149M9 1564 aa13.01□□□□□ -0.33
PABPC1-224ENST00000610907 SETD1BQ9UPS6 1966 aaKnown RBP13.01□□□□□ -0.33
PABPC1-224ENST00000610907 ATP10DQ9P241 1426 aa13□□□□□ -0.33
PABPC1-224ENST00000610907 MAP3K5Q99683 1374 aa13□□□□□ -0.33
PABPC1-224ENST00000610907 HMMRO75330 724 aa13□□□□□ -0.33
PABPC1-224ENST00000610907 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
PABPC1-224ENST00000610907 CEP85Q6P2H3 762 aa13□□□□□ -0.33
PABPC1-224ENST00000610907 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
PABPC1-224ENST00000610907 IP6K1Q92551 441 aa13□□□□□ -0.33
PABPC1-224ENST00000610907 ADGRL3Q9HAR2 1447 aa12.99□□□□□ -0.33
PABPC1-224ENST00000610907 FRAT2O75474 233 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-224ENST00000610907 TAF7Q15545 349 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-224ENST00000610907 CACNA1FO60840 1977 aa12.99□□□□□ -0.33
PABPC1-224ENST00000610907 CDC45O75419 566 aa12.98□□□□□ -0.33
PABPC1-224ENST00000610907 PLEKHM2Q8IWE5 1019 aa12.98□□□□□ -0.33
PABPC1-224ENST00000610907 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
PABPC1-224ENST00000610907 MSH6P52701 1360 aa12.98□□□□□ -0.33
PABPC1-224ENST00000610907 PHRF1Q9P1Y6 1649 aaKnown RBP12.97□□□□□ -0.33
PABPC1-224ENST00000610907 TBC1D9Q6ZT07 1266 aa12.97□□□□□ -0.33
PABPC1-224ENST00000610907 SLKQ9H2G2 1235 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-224ENST00000610907 MIS18AQ9NYP9 233 aa12.97□□□□□ -0.33
PABPC1-224ENST00000610907 CHMP5Q9NZZ3 219 aa12.97□□□□□ -0.33
PABPC1-224ENST00000610907 ADAMTSL3P82987 1691 aa12.96□□□□□ -0.33
PABPC1-224ENST00000610907 NFAT5O94916 1531 aa12.96□□□□□ -0.33
PABPC1-224ENST00000610907 GNAI3P08754 354 aa12.96□□□□□ -0.33
PABPC1-224ENST00000610907 PSME1Q06323 249 aa12.96□□□□□ -0.33
PABPC1-224ENST00000610907 TTC22Q5TAA0 569 aa12.96□□□□□ -0.33
PABPC1-224ENST00000610907 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
PABPC1-224ENST00000610907 MEIS3Q99687 375 aa12.96□□□□□ -0.33
PABPC1-224ENST00000610907 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
PABPC1-224ENST00000610907 GNAI2P04899 355 aa12.95□□□□□ -0.34
PABPC1-224ENST00000610907 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
PABPC1-224ENST00000610907 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
PABPC1-224ENST00000610907 HOXB7P09629 217 aa12.94□□□□□ -0.34
PABPC1-224ENST00000610907 FLIIQ13045 1269 aa12.94□□□□□ -0.34
PABPC1-224ENST00000610907 G2E3Q7L622 706 aa12.94□□□□□ -0.34
PABPC1-224ENST00000610907 LTN1O94822 1766 aa12.94□□□□□ -0.34
PABPC1-224ENST00000610907 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-224ENST00000610907 NCOA3Q9Y6Q9 1424 aa12.94□□□□□ -0.34
PABPC1-224ENST00000610907 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
PABPC1-224ENST00000610907 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
PABPC1-224ENST00000610907 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
PABPC1-224ENST00000610907 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
PABPC1-224ENST00000610907 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-224ENST00000610907 GSPT1P15170 499 aaKnown RBP12.93□□□□□ -0.34
PABPC1-224ENST00000610907 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
PABPC1-224ENST00000610907 FAM208AQ9UK61 1670 aaKnown RBP12.92□□□□□ -0.34
PABPC1-224ENST00000610907 FKBP5Q13451 457 aaPredicted RBP12.92□□□□□ -0.34
PABPC1-224ENST00000610907 AMOTQ4VCS5 1084 aa12.92□□□□□ -0.34
PABPC1-224ENST00000610907 SLC4A10Q6U841 1118 aa12.92□□□□□ -0.34
PABPC1-224ENST00000610907 LTV1Q96GA3 475 aaPredicted RBP12.92□□□□□ -0.34
PABPC1-224ENST00000610907 N4BP2Q86UW6 1770 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-224ENST00000610907 ATP8B2P98198 1209 aa12.91□□□□□ -0.34
PABPC1-224ENST00000610907 PLEKHO1Q53GL0 409 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-224ENST00000610907 KIF2CQ99661 725 aa12.91□□□□□ -0.34
PABPC1-224ENST00000610907 MED1Q15648 1581 aaPredicted RBP12.91□□□□□ -0.34
PABPC1-224ENST00000610907 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
PABPC1-224ENST00000610907 SLIT3O75094 1523 aa12.91□□□□□ -0.34
PABPC1-224ENST00000610907 F6X3S4 739 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms