RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CHMP4BQ9H444 224 aaKnown RBP17.23■□□□□ 0.35
NEK3-205ENST00000610828 CRB1P82279 1406 aa17.22■□□□□ 0.35
NEK3-205ENST00000610828 API5Q9BZZ5 524 aaKnown RBP17.22■□□□□ 0.35
NEK3-205ENST00000610828 MIS18AQ9NYP9 233 aa17.22■□□□□ 0.35
NEK3-205ENST00000610828 SMC5Q8IY18 1101 aa17.22■□□□□ 0.35
NEK3-205ENST00000610828 NBR1Q14596 966 aa17.21■□□□□ 0.35
NEK3-205ENST00000610828 KIAA0232Q92628 1395 aa17.21■□□□□ 0.35
NEK3-205ENST00000610828 SEC24BO95487 1268 aa17.21■□□□□ 0.34
NEK3-205ENST00000610828 C1orf115Q9H7X2 142 aa17.21■□□□□ 0.34
NEK3-205ENST00000610828 TSPYL4Q9UJ04 414 aa17.2■□□□□ 0.34
NEK3-205ENST00000610828 LTN1O94822 1766 aa17.18■□□□□ 0.34
NEK3-205ENST00000610828 NWD1Q149M9 1564 aa17.18■□□□□ 0.34
NEK3-205ENST00000610828 RTL1A6NKG5 1358 aa17.18■□□□□ 0.34
NEK3-205ENST00000610828 ORAI2Q96SN7 254 aa17.18■□□□□ 0.34
NEK3-205ENST00000610828 DAXXQ9UER7 740 aaPredicted RBP17.18■□□□□ 0.34
NEK3-205ENST00000610828 ZBTB7CA1YPR0 619 aa17.17■□□□□ 0.34
NEK3-205ENST00000610828 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
NEK3-205ENST00000610828 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
NEK3-205ENST00000610828 USP19O94966 1318 aa17.17■□□□□ 0.34
NEK3-205ENST00000610828 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
NEK3-205ENST00000610828 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
NEK3-205ENST00000610828 NUCB1Q02818 461 aa17.16■□□□□ 0.34
NEK3-205ENST00000610828 IP6K1Q92551 441 aa17.16■□□□□ 0.34
NEK3-205ENST00000610828 HTATSF1O43719 755 aaKnown RBP17.15■□□□□ 0.34
NEK3-205ENST00000610828 PLEKHG5O94827 1062 aa17.15■□□□□ 0.34
NEK3-205ENST00000610828 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
NEK3-205ENST00000610828 KCNH5Q8NCM2 988 aa17.15■□□□□ 0.34
NEK3-205ENST00000610828 NFAT5O94916 1531 aa17.15■□□□□ 0.34
NEK3-205ENST00000610828 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
NEK3-205ENST00000610828 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
NEK3-205ENST00000610828 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
NEK3-205ENST00000610828 UPF2Q9HAU5 1272 aaKnown RBP17.14■□□□□ 0.33
NEK3-205ENST00000610828 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
NEK3-205ENST00000610828 CHD1LQ86WJ1 897 aa17.13■□□□□ 0.33
NEK3-205ENST00000610828 GCC1Q96CN9 775 aa17.13■□□□□ 0.33
NEK3-205ENST00000610828 PTPRCP08575 1304 aa17.13■□□□□ 0.33
NEK3-205ENST00000610828 MAP3K5Q99683 1374 aa17.13■□□□□ 0.33
NEK3-205ENST00000610828 SIRT2Q8IXJ6 389 aa17.13■□□□□ 0.33
NEK3-205ENST00000610828 RGS12O14924 1447 aa17.12■□□□□ 0.33
NEK3-205ENST00000610828 ANKRD45Q5TZF3 282 aa17.11■□□□□ 0.33
NEK3-205ENST00000610828 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
NEK3-205ENST00000610828 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
NEK3-205ENST00000610828 LRRC37A3O60309 1634 aa17.11■□□□□ 0.33
NEK3-205ENST00000610828 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
NEK3-205ENST00000610828 MSH6P52701 1360 aa17.1■□□□□ 0.33
NEK3-205ENST00000610828 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
NEK3-205ENST00000610828 GCP02774 474 aa17.1■□□□□ 0.33
NEK3-205ENST00000610828 C19orf44Q9H6X5 657 aa17.09■□□□□ 0.33
NEK3-205ENST00000610828 G2E3Q7L622 706 aa17.08■□□□□ 0.33
NEK3-205ENST00000610828 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.33
NEK3-205ENST00000610828 STK31Q9BXU1 1019 aa17.08■□□□□ 0.33
NEK3-205ENST00000610828 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
NEK3-205ENST00000610828 KRT28Q7Z3Y7 464 aa17.08■□□□□ 0.32
NEK3-205ENST00000610828 RTL5Q5HYW3 569 aaPredicted RBP17.07■□□□□ 0.32
NEK3-205ENST00000610828 TBC1D32Q96NH3 1257 aa17.07■□□□□ 0.32
NEK3-205ENST00000610828 C1orf167Q5SNV9 1468 aa17.07■□□□□ 0.32
NEK3-205ENST00000610828 SLC4A10Q6U841 1118 aa17.07■□□□□ 0.32
NEK3-205ENST00000610828 ARHGEF25Q86VW2 580 aa17.07■□□□□ 0.32
NEK3-205ENST00000610828 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
NEK3-205ENST00000610828 PHRF1Q9P1Y6 1649 aaKnown RBP17.06■□□□□ 0.32
NEK3-205ENST00000610828 RGPD2P0DJD1 1756 aa17.06■□□□□ 0.32
NEK3-205ENST00000610828 F6X3S4 739 aa17.06■□□□□ 0.32
NEK3-205ENST00000610828 CCDC30Q5VVM6 783 aa17.06■□□□□ 0.32
NEK3-205ENST00000610828 MEIS3Q99687 375 aa17.06■□□□□ 0.32
NEK3-205ENST00000610828 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
NEK3-205ENST00000610828 SLIT3O75094 1523 aa17.05■□□□□ 0.32
NEK3-205ENST00000610828 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
NEK3-205ENST00000610828 ATP10DQ9P241 1426 aa17.04■□□□□ 0.32
NEK3-205ENST00000610828 TRPM3Q9HCF6 1732 aaPredicted RBP17.03■□□□□ 0.32
NEK3-205ENST00000610828 ATF3P18847 181 aa17.03■□□□□ 0.32
NEK3-205ENST00000610828 ANKRD44Q8N8A2 993 aa17.03■□□□□ 0.32
NEK3-205ENST00000610828 RPAP2Q8IXW5 612 aaPredicted RBP17.03■□□□□ 0.32
NEK3-205ENST00000610828 KIF1AQ12756 1690 aa17.03■□□□□ 0.32
NEK3-205ENST00000610828 CEMIPQ8WUJ3 1361 aa17.02■□□□□ 0.32
NEK3-205ENST00000610828 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.32
NEK3-205ENST00000610828 FLIIQ13045 1269 aa17.02■□□□□ 0.32
NEK3-205ENST00000610828 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
NEK3-205ENST00000610828 BECN1Q14457 450 aa17.02■□□□□ 0.32
NEK3-205ENST00000610828 CEP85Q6P2H3 762 aa17.02■□□□□ 0.32
NEK3-205ENST00000610828 ANKRD24Q8TF21 1146 aa17.02■□□□□ 0.32
NEK3-205ENST00000610828 BCL11AQ9H165 835 aa17.02■□□□□ 0.32
NEK3-205ENST00000610828 DCTPP1Q9H773 170 aa17.02■□□□□ 0.32
NEK3-205ENST00000610828 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
NEK3-205ENST00000610828 TMEM94Q12767 1356 aa17.02■□□□□ 0.32
NEK3-205ENST00000610828 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.31
NEK3-205ENST00000610828 FAM208AQ9UK61 1670 aaKnown RBP17.02■□□□□ 0.31
NEK3-205ENST00000610828 ZNF530Q6P9A1 599 aaPredicted RBP17.01■□□□□ 0.31
NEK3-205ENST00000610828 C22orf23Q9BZE7 217 aa17.01■□□□□ 0.31
NEK3-205ENST00000610828 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
NEK3-205ENST00000610828 PLEKHO1Q53GL0 409 aaPredicted RBP17.01■□□□□ 0.31
NEK3-205ENST00000610828 AXIN2Q9Y2T1 843 aa17.01■□□□□ 0.31
NEK3-205ENST00000610828 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
NEK3-205ENST00000610828 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
NEK3-205ENST00000610828 HDGFL1Q5TGJ6 251 aa16.99■□□□□ 0.31
NEK3-205ENST00000610828 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
NEK3-205ENST00000610828 TEFQ10587 303 aa16.99■□□□□ 0.31
NEK3-205ENST00000610828 AMOTQ4VCS5 1084 aa16.99■□□□□ 0.31
NEK3-205ENST00000610828 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
NEK3-205ENST00000610828 MST1RQ04912 1400 aa16.98■□□□□ 0.31
NEK3-205ENST00000610828 STRCP1A6NGW2 1772 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms