RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 CCDC39Q9UFE4 941 aa17.18■□□□□ 0.34
LINC02538-201ENST00000609107 ABCC1P33527 1531 aa17.18■□□□□ 0.34
LINC02538-201ENST00000609107 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
LINC02538-201ENST00000609107 CPLX1O14810 134 aa17.17■□□□□ 0.34
LINC02538-201ENST00000609107 CYP46A1Q9Y6A2 500 aa17.17■□□□□ 0.34
LINC02538-201ENST00000609107 TTC37Q6PGP7 1564 aa17.17■□□□□ 0.34
LINC02538-201ENST00000609107 KDM5AP29375 1690 aaKnown RBP17.17■□□□□ 0.34
LINC02538-201ENST00000609107 KIF1BPQ96EK5 621 aa17.17■□□□□ 0.34
LINC02538-201ENST00000609107 TRPM2O94759 1503 aa17.17■□□□□ 0.34
LINC02538-201ENST00000609107 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
LINC02538-201ENST00000609107 TRDNQ13061 729 aa17.16■□□□□ 0.34
LINC02538-201ENST00000609107 TSPY26PQ9H489 355 aa17.16■□□□□ 0.34
LINC02538-201ENST00000609107 F6X3S4 739 aa17.16■□□□□ 0.34
LINC02538-201ENST00000609107 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
LINC02538-201ENST00000609107 RNF214Q8ND24 703 aa17.16■□□□□ 0.34
LINC02538-201ENST00000609107 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
LINC02538-201ENST00000609107 PRDM15P57071 1507 aaPredicted RBP17.15■□□□□ 0.34
LINC02538-201ENST00000609107 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
LINC02538-201ENST00000609107 ZBTB40Q9NUA8 1239 aa17.15■□□□□ 0.34
LINC02538-201ENST00000609107 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
LINC02538-201ENST00000609107 FLIIQ13045 1269 aa17.15■□□□□ 0.34
LINC02538-201ENST00000609107 NPATQ14207 1427 aa17.15■□□□□ 0.34
LINC02538-201ENST00000609107 SASS6Q6UVJ0 657 aa17.15■□□□□ 0.34
LINC02538-201ENST00000609107 VAMP4O75379 141 aa17.15■□□□□ 0.34
LINC02538-201ENST00000609107 TTC22Q5TAA0 569 aa17.14■□□□□ 0.34
LINC02538-201ENST00000609107 PLA2R1Q13018 1463 aa17.14■□□□□ 0.34
LINC02538-201ENST00000609107 ANKRD1Q15327 319 aa17.14■□□□□ 0.33
LINC02538-201ENST00000609107 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
LINC02538-201ENST00000609107 SYNMO15061 1565 aa17.14■□□□□ 0.33
LINC02538-201ENST00000609107 CDC42BPAQ5VT25 1732 aa17.14■□□□□ 0.33
LINC02538-201ENST00000609107 PHF8Q9UPP1 1060 aa17.14■□□□□ 0.33
LINC02538-201ENST00000609107 CCDC73Q6ZRK6 1079 aa17.13■□□□□ 0.33
LINC02538-201ENST00000609107 TNPO1Q92973 898 aaKnown RBP17.13■□□□□ 0.33
LINC02538-201ENST00000609107 MAP4K4O95819 1239 aaPredicted RBP17.13■□□□□ 0.33
LINC02538-201ENST00000609107 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
LINC02538-201ENST00000609107 AMOTQ4VCS5 1084 aa17.13■□□□□ 0.33
LINC02538-201ENST00000609107 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
LINC02538-201ENST00000609107 GLRX3O76003 335 aaKnown RBP17.13■□□□□ 0.33
LINC02538-201ENST00000609107 TRIM29Q14134 588 aa17.13■□□□□ 0.33
LINC02538-201ENST00000609107 AACSQ86V21 672 aa17.13■□□□□ 0.33
LINC02538-201ENST00000609107 ZSCAN31Q96LW9 406 aaPredicted RBP17.13■□□□□ 0.33
LINC02538-201ENST00000609107 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
LINC02538-201ENST00000609107 PLXNC1O60486 1568 aa17.12■□□□□ 0.33
LINC02538-201ENST00000609107 MYOM2P54296 1465 aa17.12■□□□□ 0.33
LINC02538-201ENST00000609107 APPP05067 770 aa17.12■□□□□ 0.33
LINC02538-201ENST00000609107 NUTM1Q86Y26 1132 aa17.12■□□□□ 0.33
LINC02538-201ENST00000609107 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
LINC02538-201ENST00000609107 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
LINC02538-201ENST00000609107 DNAJC2Q99543 621 aaKnown RBP17.11■□□□□ 0.33
LINC02538-201ENST00000609107 FIBPO43427 364 aa17.11■□□□□ 0.33
LINC02538-201ENST00000609107 EIF4A2Q14240 407 aaKnown RBP17.11■□□□□ 0.33
LINC02538-201ENST00000609107 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
LINC02538-201ENST00000609107 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
LINC02538-201ENST00000609107 CWC27Q6UX04 472 aaKnown RBP17.11■□□□□ 0.33
LINC02538-201ENST00000609107 AKAP17AQ02040 695 aaKnown RBP17.1■□□□□ 0.33
LINC02538-201ENST00000609107 SNX21Q969T3 373 aa17.1■□□□□ 0.33
LINC02538-201ENST00000609107 TPM3P06753 285 aa17.1■□□□□ 0.33
LINC02538-201ENST00000609107 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
LINC02538-201ENST00000609107 PHACTR3Q96KR7 559 aa17.1■□□□□ 0.33
LINC02538-201ENST00000609107 TRMT2AQ8IZ69 625 aaKnown RBP17.1■□□□□ 0.33
LINC02538-201ENST00000609107 DNAAF4Q8WXU2 420 aa17.1■□□□□ 0.33
LINC02538-201ENST00000609107 ARID3AQ99856 593 aa17.1■□□□□ 0.33
LINC02538-201ENST00000609107 ERVK-7P63135 1459 aa17.1■□□□□ 0.33
LINC02538-201ENST00000609107 SIL1Q9H173 461 aa17.09■□□□□ 0.33
LINC02538-201ENST00000609107 CEBPAP49715 358 aaPredicted RBP17.09■□□□□ 0.33
LINC02538-201ENST00000609107 CABP4P57796 275 aa17.09■□□□□ 0.33
LINC02538-201ENST00000609107 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
LINC02538-201ENST00000609107 SSFA2P28290 1259 aa17.09■□□□□ 0.33
LINC02538-201ENST00000609107 PDRG1Q9NUG6 133 aa17.09■□□□□ 0.33
LINC02538-201ENST00000609107 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
LINC02538-201ENST00000609107 ZNF521Q96K83 1311 aa17.09■□□□□ 0.33
LINC02538-201ENST00000609107 PIK3R4Q99570 1358 aa17.08■□□□□ 0.33
LINC02538-201ENST00000609107 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
LINC02538-201ENST00000609107 BLOC1S2Q6QNY1 142 aa17.08■□□□□ 0.32
LINC02538-201ENST00000609107 USHBP1Q8N6Y0 703 aa17.08■□□□□ 0.32
LINC02538-201ENST00000609107 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
LINC02538-201ENST00000609107 NEO1Q92859 1461 aa17.08■□□□□ 0.32
LINC02538-201ENST00000609107 IQGAP3Q86VI3 1631 aa17.08■□□□□ 0.32
LINC02538-201ENST00000609107 ESPNB1AK53 854 aa17.08■□□□□ 0.32
LINC02538-201ENST00000609107 SEC24BO95487 1268 aa17.08■□□□□ 0.32
LINC02538-201ENST00000609107 MYL6BP14649 208 aa17.08■□□□□ 0.32
LINC02538-201ENST00000609107 MEIS3Q99687 375 aa17.08■□□□□ 0.32
LINC02538-201ENST00000609107 DBF4Q9UBU7 674 aaPredicted RBP17.07■□□□□ 0.32
LINC02538-201ENST00000609107 DCTPP1Q9H773 170 aa17.07■□□□□ 0.32
LINC02538-201ENST00000609107 BCORL1Q5H9F3 1711 aa17.07■□□□□ 0.32
LINC02538-201ENST00000609107 KRT85P78386 507 aa17.06■□□□□ 0.32
LINC02538-201ENST00000609107 EDC4Q6P2E9 1401 aaKnown RBP17.06■□□□□ 0.32
LINC02538-201ENST00000609107 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
LINC02538-201ENST00000609107 LARP1Q6PKG0 1096 aaKnown RBP17.06■□□□□ 0.32
LINC02538-201ENST00000609107 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
LINC02538-201ENST00000609107 CROCC2H7BZ55 1655 aa17.06■□□□□ 0.32
LINC02538-201ENST00000609107 KRT32Q14532 448 aa17.06■□□□□ 0.32
LINC02538-201ENST00000609107 LARP1BQ659C4 914 aaKnown RBP17.05■□□□□ 0.32
LINC02538-201ENST00000609107 SDSP20132 328 aa17.05■□□□□ 0.32
LINC02538-201ENST00000609107 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
LINC02538-201ENST00000609107 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
LINC02538-201ENST00000609107 RASSF8Q8NHQ8 419 aa17.05■□□□□ 0.32
LINC02538-201ENST00000609107 TPM2P07951 284 aa17.04■□□□□ 0.32
LINC02538-201ENST00000609107 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
LINC02538-201ENST00000609107 FOSBP53539 338 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms