RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 TERF2IPQ9NYB0 399 aa7.91□□□□□ -1.14
HDDC2-205ENST00000608456 NOB1Q9ULX3 412 aaKnown RBP7.91□□□□□ -1.14
HDDC2-205ENST00000608456 PTCH1Q13635 1447 aa7.91□□□□□ -1.14
HDDC2-205ENST00000608456 ABCA9Q8IUA7 1624 aa7.91□□□□□ -1.14
HDDC2-205ENST00000608456 MROH1Q8NDA8 1641 aa7.91□□□□□ -1.14
HDDC2-205ENST00000608456 ZCCHC11Q5TAX3 1644 aaKnown RBP7.9□□□□□ -1.14
HDDC2-205ENST00000608456 CFAP74Q9C0B2 1584 aa7.9□□□□□ -1.14
HDDC2-205ENST00000608456 COL3A1P02461 1466 aaPredicted RBP7.9□□□□□ -1.14
HDDC2-205ENST00000608456 KIF3BO15066 747 aa7.9□□□□□ -1.14
HDDC2-205ENST00000608456 GNAI1P63096 354 aa7.9□□□□□ -1.14
HDDC2-205ENST00000608456 UVSSAQ2YD98 709 aa7.9□□□□□ -1.14
HDDC2-205ENST00000608456 CASC1Q6TDU7 716 aa7.9□□□□□ -1.14
HDDC2-205ENST00000608456 GAS2L3Q86XJ1 694 aa7.9□□□□□ -1.14
HDDC2-205ENST00000608456 RPAP2Q8IXW5 612 aaPredicted RBP7.9□□□□□ -1.14
HDDC2-205ENST00000608456 TMEM57Q8N5G2 664 aa7.9□□□□□ -1.14
HDDC2-205ENST00000608456 IL17RAQ96F46 866 aa7.9□□□□□ -1.14
HDDC2-205ENST00000608456 DDX49Q9Y6V7 483 aaKnown RBP7.9□□□□□ -1.14
HDDC2-205ENST00000608456 PPLO60437 1756 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 QRICH2Q9H0J4 1663 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 ST18O60284 1047 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 DIAPH1O60610 1272 aaKnown RBP7.89□□□□□ -1.15
HDDC2-205ENST00000608456 PDIA4P13667 645 aaKnown RBP7.89□□□□□ -1.15
HDDC2-205ENST00000608456 EVX2Q03828 476 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 NEUROD2Q15784 382 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 KIAA1211Q6ZU35 1233 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 AFAP1Q8N556 730 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 FAM184AQ8NB25 1140 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 DCTPP1Q9H773 170 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 IFT57Q9NWB7 429 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 CCDC39Q9UFE4 941 aa7.89□□□□□ -1.15
HDDC2-205ENST00000608456 CD109Q6YHK3 1445 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 ABCC4O15439 1325 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 ERBB4Q15303 1308 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 REC8O95072 547 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 ZNF853P0CG23 659 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 RIPK4P57078 832 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 HMGN5P82970 282 aaKnown RBP7.88□□□□□ -1.15
HDDC2-205ENST00000608456 IER5LQ5T953 404 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 INTS3Q68E01 1043 aaKnown RBP7.88□□□□□ -1.15
HDDC2-205ENST00000608456 ASTLQ6HA08 431 aaPredicted RBP7.88□□□□□ -1.15
HDDC2-205ENST00000608456 TBC1D9Q6ZT07 1266 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 SMAP1Q8IYB5 467 aaPredicted RBP7.88□□□□□ -1.15
HDDC2-205ENST00000608456 SYAP1Q96A49 352 aaPredicted RBP7.88□□□□□ -1.15
HDDC2-205ENST00000608456 INTS4Q96HW7 963 aaKnown RBP7.88□□□□□ -1.15
HDDC2-205ENST00000608456 LMBRD1Q9NUN5 540 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 WDR70Q9NW82 654 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 SLC52A1Q9NWF4 448 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 ZKSCAN5Q9Y2L8 839 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 RRP7AQ9Y3A4 280 aaKnown RBP7.88□□□□□ -1.15
HDDC2-205ENST00000608456 ANKRD26Q9UPS8 1709 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 ABCC3O15438 1527 aa7.88□□□□□ -1.15
HDDC2-205ENST00000608456 MLH3Q9UHC1 1453 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 VAMP4O75379 141 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 PHF14O94880 888 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 LETM1O95202 739 aaPredicted RBP7.87□□□□□ -1.15
HDDC2-205ENST00000608456 NCLP19338 710 aaKnown RBP7.87□□□□□ -1.15
HDDC2-205ENST00000608456 ANAPC15P60006 121 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 ANKRD45Q5TZF3 282 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 LRSAM1Q6UWE0 723 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 MRPL50Q8N5N7 158 aaKnown RBP7.87□□□□□ -1.15
HDDC2-205ENST00000608456 PRIMPOLQ96LW4 560 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 USP26Q9BXU7 913 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 OSBPL3Q9H4L5 887 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 TNNQ9UQP3 1299 aa7.87□□□□□ -1.15
HDDC2-205ENST00000608456 CPSF1Q10570 1443 aaKnown RBP7.86□□□□□ -1.15
HDDC2-205ENST00000608456 TPM3P06753 285 aa7.86□□□□□ -1.15
HDDC2-205ENST00000608456 SASS6Q6UVJ0 657 aa7.86□□□□□ -1.15
HDDC2-205ENST00000608456 HDGFL2Q7Z4V5 671 aaPredicted RBP7.86□□□□□ -1.15
HDDC2-205ENST00000608456 BCL2L13Q9BXK5 485 aa7.86□□□□□ -1.15
HDDC2-205ENST00000608456 LNPKQ9C0E8 428 aa7.86□□□□□ -1.15
HDDC2-205ENST00000608456 TRAK1Q9UPV9 953 aa7.86□□□□□ -1.15
HDDC2-205ENST00000608456 PIK3C2BO00750 1634 aa7.85□□□□□ -1.15
HDDC2-205ENST00000608456 FYB1O15117 783 aa7.85□□□□□ -1.15
HDDC2-205ENST00000608456 ATMINO43313 823 aaPredicted RBP7.85□□□□□ -1.15
HDDC2-205ENST00000608456 MFSD10Q14728 455 aa7.85□□□□□ -1.15
HDDC2-205ENST00000608456 NFE2L2Q16236 605 aa7.85□□□□□ -1.15
HDDC2-205ENST00000608456 ZSCAN23Q3MJ62 389 aa7.85□□□□□ -1.15
HDDC2-205ENST00000608456 TTC22Q5TAA0 569 aa7.85□□□□□ -1.15
HDDC2-205ENST00000608456 UTP14CQ5TAP6 766 aaKnown RBP7.85□□□□□ -1.15
HDDC2-205ENST00000608456 GAS2L2Q8NHY3 880 aa7.85□□□□□ -1.15
HDDC2-205ENST00000608456 CRISPLD2Q9H0B8 497 aa7.85□□□□□ -1.15
HDDC2-205ENST00000608456 CLTCQ00610 1675 aaKnown RBP7.85□□□□□ -1.15
HDDC2-205ENST00000608456 FAM135BQ49AJ0 1406 aa7.85□□□□□ -1.15
HDDC2-205ENST00000608456 AATKQ6ZMQ8 1374 aa7.84□□□□□ -1.15
HDDC2-205ENST00000608456 FRMPD1Q5SYB0 1578 aa7.84□□□□□ -1.15
HDDC2-205ENST00000608456 HECW2Q9P2P5 1572 aa7.84□□□□□ -1.15
HDDC2-205ENST00000608456 TULP4Q9NRJ4 1543 aa7.84□□□□□ -1.15
HDDC2-205ENST00000608456 SSFA2P28290 1259 aa7.84□□□□□ -1.15
HDDC2-205ENST00000608456 GTF2F1P35269 517 aaKnown RBP eCLIP7.84□□□□□ -1.15
HDDC2-205ENST00000608456 PLEKHM2Q8IWE5 1019 aa7.84□□□□□ -1.15
HDDC2-205ENST00000608456 ANKRD44Q8N8A2 993 aa7.84□□□□□ -1.15
HDDC2-205ENST00000608456 TSR2Q969E8 191 aaKnown RBP7.84□□□□□ -1.15
HDDC2-205ENST00000608456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.84□□□□□ -1.15
HDDC2-205ENST00000608456 NPATQ14207 1427 aa7.84□□□□□ -1.15
HDDC2-205ENST00000608456 GLI2P10070 1586 aa7.84□□□□□ -1.15
HDDC2-205ENST00000608456 PTPRCP08575 1304 aa7.83□□□□□ -1.16
HDDC2-205ENST00000608456 U2SURPO15042 1029 aaKnown RBP7.83□□□□□ -1.16
HDDC2-205ENST00000608456 HMMRO75330 724 aa7.83□□□□□ -1.16
HDDC2-205ENST00000608456 CUL4AQ13619 759 aa7.83□□□□□ -1.16
HDDC2-205ENST00000608456 SSH2Q76I76 1423 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms