RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
CTSA-214ENST00000606788 NRKQ7Z2Y5 1582 aa20.03■□□□□ 0.8
CTSA-214ENST00000606788 NBPF6Q5VWK0 638 aa20.03■□□□□ 0.8
CTSA-214ENST00000606788 NBPF4Q96M43 638 aa20.03■□□□□ 0.8
CTSA-214ENST00000606788 ZC3H6P61129 1189 aaKnown RBP20.03■□□□□ 0.8
CTSA-214ENST00000606788 HDAC1Q13547 482 aaPredicted RBP20.03■□□□□ 0.8
CTSA-214ENST00000606788 SLKQ9H2G2 1235 aaPredicted RBP20.02■□□□□ 0.8
CTSA-214ENST00000606788 MYT1Q01538 1121 aa20.01■□□□□ 0.79
CTSA-214ENST00000606788 IGSF1Q8N6C5 1336 aa20.01■□□□□ 0.79
CTSA-214ENST00000606788 AAMPQ13685 434 aa20.01■□□□□ 0.79
CTSA-214ENST00000606788 IL17REQ8NFR9 667 aa20.01■□□□□ 0.79
CTSA-214ENST00000606788 MEIS3Q99687 375 aa20.01■□□□□ 0.79
CTSA-214ENST00000606788 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
CTSA-214ENST00000606788 SMC5Q8IY18 1101 aa20■□□□□ 0.79
CTSA-214ENST00000606788 API5Q9BZZ5 524 aaKnown RBP20■□□□□ 0.79
CTSA-214ENST00000606788 PIK3C2AO00443 1686 aa20■□□□□ 0.79
CTSA-214ENST00000606788 GNAT3A8MTJ3 354 aa19.99■□□□□ 0.79
CTSA-214ENST00000606788 CHD1LQ86WJ1 897 aa19.99■□□□□ 0.79
CTSA-214ENST00000606788 LGR6Q9HBX8 967 aa19.99■□□□□ 0.79
CTSA-214ENST00000606788 C16orf71Q8IYS4 520 aaPredicted RBP19.99■□□□□ 0.79
CTSA-214ENST00000606788 GAS2L2Q8NHY3 880 aa19.99■□□□□ 0.79
CTSA-214ENST00000606788 CABLES1Q8TDN4 633 aa19.99■□□□□ 0.79
CTSA-214ENST00000606788 PIK3R4Q99570 1358 aa19.98■□□□□ 0.79
CTSA-214ENST00000606788 ABCC4O15439 1325 aa19.98■□□□□ 0.79
CTSA-214ENST00000606788 SMARCA5O60264 1052 aaPredicted RBP19.98■□□□□ 0.79
CTSA-214ENST00000606788 ANXA1P04083 346 aa19.98■□□□□ 0.79
CTSA-214ENST00000606788 UPF2Q9HAU5 1272 aaKnown RBP19.98■□□□□ 0.79
CTSA-214ENST00000606788 ARHGEF10O15013 1369 aa19.97■□□□□ 0.79
CTSA-214ENST00000606788 MPRIPQ6WCQ1 1025 aa19.97■□□□□ 0.79
CTSA-214ENST00000606788 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
CTSA-214ENST00000606788 CRB1P82279 1406 aa19.96■□□□□ 0.79
CTSA-214ENST00000606788 KCNQ3O43525 872 aa19.96■□□□□ 0.79
CTSA-214ENST00000606788 NUCB1Q02818 461 aa19.96■□□□□ 0.79
CTSA-214ENST00000606788 FKBP5Q13451 457 aaPredicted RBP19.96■□□□□ 0.79
CTSA-214ENST00000606788 ARHGAP45Q92619 1136 aa19.96■□□□□ 0.79
CTSA-214ENST00000606788 NPHP4O75161 1426 aaPredicted RBP19.96■□□□□ 0.79
CTSA-214ENST00000606788 GCP02774 474 aa19.95■□□□□ 0.78
CTSA-214ENST00000606788 MSH6P52701 1360 aa19.95■□□□□ 0.78
CTSA-214ENST00000606788 OTUD7AQ8TE49 926 aaPredicted RBP19.95■□□□□ 0.78
CTSA-214ENST00000606788 DEKP35659 375 aaKnown RBP19.94■□□□□ 0.78
CTSA-214ENST00000606788 KRT28Q7Z3Y7 464 aa19.94■□□□□ 0.78
CTSA-214ENST00000606788 AXIN2Q9Y2T1 843 aa19.94■□□□□ 0.78
CTSA-214ENST00000606788 STK31Q9BXU1 1019 aa19.93■□□□□ 0.78
CTSA-214ENST00000606788 BRPF1P55201 1214 aaPredicted RBP19.93■□□□□ 0.78
CTSA-214ENST00000606788 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
CTSA-214ENST00000606788 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
CTSA-214ENST00000606788 IP6K1Q92551 441 aa19.92■□□□□ 0.78
CTSA-214ENST00000606788 ZNF530Q6P9A1 599 aaPredicted RBP19.91■□□□□ 0.78
CTSA-214ENST00000606788 KDRP35968 1356 aa19.91■□□□□ 0.78
CTSA-214ENST00000606788 PHAXQ9H814 394 aaKnown RBP19.91■□□□□ 0.78
CTSA-214ENST00000606788 CHRNA2Q15822 529 aa19.9■□□□□ 0.78
CTSA-214ENST00000606788 TSHZ3Q63HK5 1081 aa19.89■□□□□ 0.78
CTSA-214ENST00000606788 ADGRL3Q9HAR2 1447 aa19.89■□□□□ 0.77
CTSA-214ENST00000606788 TAF7Q15545 349 aaPredicted RBP19.89■□□□□ 0.77
CTSA-214ENST00000606788 ANKRD24Q8TF21 1146 aa19.89■□□□□ 0.77
CTSA-214ENST00000606788 C22orf23Q9BZE7 217 aa19.89■□□□□ 0.77
CTSA-214ENST00000606788 FLIIQ13045 1269 aa19.88■□□□□ 0.77
CTSA-214ENST00000606788 TBC1D32Q96NH3 1257 aa19.88■□□□□ 0.77
CTSA-214ENST00000606788 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
CTSA-214ENST00000606788 HDGFL1Q5TGJ6 251 aa19.88■□□□□ 0.77
CTSA-214ENST00000606788 MAP3K5Q99683 1374 aa19.88■□□□□ 0.77
CTSA-214ENST00000606788 ATF3P18847 181 aa19.87■□□□□ 0.77
CTSA-214ENST00000606788 NFKBIBQ15653 356 aa19.87■□□□□ 0.77
CTSA-214ENST00000606788 INTS3Q68E01 1043 aaKnown RBP19.87■□□□□ 0.77
CTSA-214ENST00000606788 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
CTSA-214ENST00000606788 FRAT2O75474 233 aaPredicted RBP19.86■□□□□ 0.77
CTSA-214ENST00000606788 TEFQ10587 303 aa19.86■□□□□ 0.77
CTSA-214ENST00000606788 CEP85Q6P2H3 762 aa19.86■□□□□ 0.77
CTSA-214ENST00000606788 NLRP2Q9NX02 1062 aa19.86■□□□□ 0.77
CTSA-214ENST00000606788 RGS12O14924 1447 aa19.86■□□□□ 0.77
CTSA-214ENST00000606788 PRAMEF22A3QJZ6 481 aa19.86■□□□□ 0.77
CTSA-214ENST00000606788 GCC1Q96CN9 775 aa19.86■□□□□ 0.77
CTSA-214ENST00000606788 CHD2O14647 1828 aaKnown RBP19.85■□□□□ 0.77
CTSA-214ENST00000606788 KCNH5Q8NCM2 988 aa19.85■□□□□ 0.77
CTSA-214ENST00000606788 TBC1D2Q9BYX2 928 aa19.84■□□□□ 0.77
CTSA-214ENST00000606788 RGPD1P0DJD0 1748 aa19.84■□□□□ 0.77
CTSA-214ENST00000606788 KIAA0232Q92628 1395 aa19.84■□□□□ 0.77
CTSA-214ENST00000606788 CSB-PGBD3P0DP91 1061 aa19.84■□□□□ 0.77
CTSA-214ENST00000606788 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
CTSA-214ENST00000606788 CCDC30Q5VVM6 783 aa19.84■□□□□ 0.77
CTSA-214ENST00000606788 CHMP4BQ9H444 224 aaKnown RBP19.84■□□□□ 0.77
CTSA-214ENST00000606788 ARHGEF25Q86VW2 580 aa19.83■□□□□ 0.77
CTSA-214ENST00000606788 C19orf44Q9H6X5 657 aa19.83■□□□□ 0.77
CTSA-214ENST00000606788 FOXD4L1Q9NU39 408 aa19.83■□□□□ 0.77
CTSA-214ENST00000606788 TMEM94Q12767 1356 aa19.83■□□□□ 0.76
CTSA-214ENST00000606788 RTL1A6NKG5 1358 aa19.82■□□□□ 0.76
CTSA-214ENST00000606788 CHPF2Q9P2E5 772 aa19.82■□□□□ 0.76
CTSA-214ENST00000606788 BTBD11A6QL63 1104 aa19.82■□□□□ 0.76
CTSA-214ENST00000606788 ANKRD44Q8N8A2 993 aa19.82■□□□□ 0.76
CTSA-214ENST00000606788 BECN1Q14457 450 aa19.81■□□□□ 0.76
CTSA-214ENST00000606788 C1orf141Q5JVX7 400 aa19.81■□□□□ 0.76
CTSA-214ENST00000606788 DNAJC5Q9H3Z4 198 aa19.81■□□□□ 0.76
CTSA-214ENST00000606788 PTPRCP08575 1304 aa19.81■□□□□ 0.76
CTSA-214ENST00000606788 GSPT1P15170 499 aaKnown RBP19.81■□□□□ 0.76
CTSA-214ENST00000606788 SLC39A6Q13433 755 aa19.81■□□□□ 0.76
CTSA-214ENST00000606788 TBC1D9Q6ZT07 1266 aa19.8■□□□□ 0.76
CTSA-214ENST00000606788 NWD1Q149M9 1564 aa19.8■□□□□ 0.76
CTSA-214ENST00000606788 PIP4K2AP48426 406 aaPredicted RBP19.8■□□□□ 0.76
CTSA-214ENST00000606788 RBM42Q9BTD8 480 aaKnown RBP19.8■□□□□ 0.76
CTSA-214ENST00000606788 DCTPP1Q9H773 170 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms