RNA–Protein interactions for RNA: ENST00000606550.1

FAM47E-209, Transcript of family with sequence similarity 47 member E, humanhuman

Gene FAM47E, Length 2,109 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47E-209ENST00000606550 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
FAM47E-209ENST00000606550 TRIM37O94972 964 aa12.57□□□□□ -0.4
FAM47E-209ENST00000606550 INSRP06213 1382 aa12.57□□□□□ -0.4
FAM47E-209ENST00000606550 PARD3Q8TEW0 1356 aa12.57□□□□□ -0.4
FAM47E-209ENST00000606550 CDK11BP21127 795 aaKnown RBP12.56□□□□□ -0.4
FAM47E-209ENST00000606550 KIF7Q2M1P5 1343 aa12.56□□□□□ -0.4
FAM47E-209ENST00000606550 PEAK1Q9H792 1746 aa12.56□□□□□ -0.4
FAM47E-209ENST00000606550 TNS1Q9HBL0 1735 aaKnown RBP12.56□□□□□ -0.4
FAM47E-209ENST00000606550 LTV1Q96GA3 475 aaPredicted RBP12.56□□□□□ -0.4
FAM47E-209ENST00000606550 MARCH10Q8NA82 808 aaPredicted RBP12.55□□□□□ -0.4
FAM47E-209ENST00000606550 APBA3O96018 575 aa12.54□□□□□ -0.4
FAM47E-209ENST00000606550 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
FAM47E-209ENST00000606550 EN1Q05925 392 aaPredicted RBP12.54□□□□□ -0.4
FAM47E-209ENST00000606550 KNSTRNQ9Y448 316 aa12.54□□□□□ -0.4
FAM47E-209ENST00000606550 HSP90AB2PQ58FF8 381 aa12.53□□□□□ -0.4
FAM47E-209ENST00000606550 EMILIN1Q9Y6C2 1016 aa12.53□□□□□ -0.4
FAM47E-209ENST00000606550 ANKRD26Q9UPS8 1709 aa12.53□□□□□ -0.4
FAM47E-209ENST00000606550 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
FAM47E-209ENST00000606550 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
FAM47E-209ENST00000606550 CCDC136Q96JN2 1154 aa12.52□□□□□ -0.4
FAM47E-209ENST00000606550 NBPF6Q5VWK0 638 aa12.52□□□□□ -0.41
FAM47E-209ENST00000606550 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
FAM47E-209ENST00000606550 NBPF4Q96M43 638 aa12.52□□□□□ -0.41
FAM47E-209ENST00000606550 POLKQ9UBT6 870 aa12.52□□□□□ -0.41
FAM47E-209ENST00000606550 PLSCR1O15162 318 aa12.5□□□□□ -0.41
FAM47E-209ENST00000606550 AAMPQ13685 434 aa12.5□□□□□ -0.41
FAM47E-209ENST00000606550 EZH2Q15910 746 aaKnown RBP12.5□□□□□ -0.41
FAM47E-209ENST00000606550 PPM1GO15355 546 aaPredicted RBP12.5□□□□□ -0.41
FAM47E-209ENST00000606550 MORC1Q86VD1 984 aa12.5□□□□□ -0.41
FAM47E-209ENST00000606550 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
FAM47E-209ENST00000606550 A0A0U1RQG5 324 aaPredicted RBP12.49□□□□□ -0.41
FAM47E-209ENST00000606550 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
FAM47E-209ENST00000606550 MEGF6O75095 1541 aa12.49□□□□□ -0.41
FAM47E-209ENST00000606550 RGPD3A6NKT7 1758 aaPredicted RBP12.49□□□□□ -0.41
FAM47E-209ENST00000606550 RGPD4Q7Z3J3 1758 aa12.49□□□□□ -0.41
FAM47E-209ENST00000606550 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
FAM47E-209ENST00000606550 NCAPD2Q15021 1401 aa12.48□□□□□ -0.41
FAM47E-209ENST00000606550 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
FAM47E-209ENST00000606550 PER1O15534 1290 aaPredicted RBP12.47□□□□□ -0.41
FAM47E-209ENST00000606550 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
FAM47E-209ENST00000606550 MAP2P11137 1827 aaKnown RBP12.47□□□□□ -0.41
FAM47E-209ENST00000606550 RREB1Q92766 1687 aa12.47□□□□□ -0.41
FAM47E-209ENST00000606550 PLEKHG2Q9H7P9 1386 aa12.47□□□□□ -0.41
FAM47E-209ENST00000606550 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.41
FAM47E-209ENST00000606550 NHSQ6T4R5 1651 aa12.46□□□□□ -0.41
FAM47E-209ENST00000606550 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
FAM47E-209ENST00000606550 USHBP1Q8N6Y0 703 aa12.46□□□□□ -0.41
FAM47E-209ENST00000606550 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.41
FAM47E-209ENST00000606550 NBPF14Q5TI25 921 aa12.46□□□□□ -0.42
FAM47E-209ENST00000606550 EYA1Q99502 592 aa12.45□□□□□ -0.42
FAM47E-209ENST00000606550 PCDH11XQ9BZA7 1347 aa12.45□□□□□ -0.42
FAM47E-209ENST00000606550 PCDH11YQ9BZA8 1340 aa12.45□□□□□ -0.42
FAM47E-209ENST00000606550 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
FAM47E-209ENST00000606550 PTF1AQ7RTS3 328 aa12.44□□□□□ -0.42
FAM47E-209ENST00000606550 KCNQ2O43526 872 aa12.44□□□□□ -0.42
FAM47E-209ENST00000606550 ACSBG1Q96GR2 724 aa12.44□□□□□ -0.42
FAM47E-209ENST00000606550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.42
FAM47E-209ENST00000606550 NUP188Q5SRE5 1749 aa12.43□□□□□ -0.42
FAM47E-209ENST00000606550 IGSF1Q8N6C5 1336 aa12.42□□□□□ -0.42
FAM47E-209ENST00000606550 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
FAM47E-209ENST00000606550 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
FAM47E-209ENST00000606550 HSP90B1P14625 803 aaKnown RBP12.42□□□□□ -0.42
FAM47E-209ENST00000606550 R3HDM1Q15032 1099 aaKnown RBP12.42□□□□□ -0.42
FAM47E-209ENST00000606550 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
FAM47E-209ENST00000606550 SPG7Q9UQ90 795 aa12.42□□□□□ -0.42
FAM47E-209ENST00000606550 TXNRD1Q16881 649 aa12.41□□□□□ -0.42
FAM47E-209ENST00000606550 PAXIP1Q6ZW49 1069 aaPredicted RBP12.41□□□□□ -0.42
FAM47E-209ENST00000606550 PROM2Q8N271 834 aa12.41□□□□□ -0.42
FAM47E-209ENST00000606550 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.42
FAM47E-209ENST00000606550 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
FAM47E-209ENST00000606550 CYP27B1O15528 508 aa12.39□□□□□ -0.43
FAM47E-209ENST00000606550 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
FAM47E-209ENST00000606550 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
FAM47E-209ENST00000606550 SYTL4Q96C24 671 aaPredicted RBP12.39□□□□□ -0.43
FAM47E-209ENST00000606550 BTAF1O14981 1849 aa12.39□□□□□ -0.43
FAM47E-209ENST00000606550 MTHFSP49914 203 aa12.38□□□□□ -0.43
FAM47E-209ENST00000606550 DOT1LQ8TEK3 1739 aa12.38□□□□□ -0.43
FAM47E-209ENST00000606550 IL13P35225 146 aa12.38□□□□□ -0.43
FAM47E-209ENST00000606550 SLC27A3Q5K4L6 730 aa12.38□□□□□ -0.43
FAM47E-209ENST00000606550 LRP5O75197 1615 aa12.38□□□□□ -0.43
FAM47E-209ENST00000606550 KDRP35968 1356 aa12.37□□□□□ -0.43
FAM47E-209ENST00000606550 HMGB2P26583 209 aaKnown RBP12.37□□□□□ -0.43
FAM47E-209ENST00000606550 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
FAM47E-209ENST00000606550 AMOTQ4VCS5 1084 aa12.37□□□□□ -0.43
FAM47E-209ENST00000606550 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
FAM47E-209ENST00000606550 RBM10P98175 930 aaKnown RBP12.36□□□□□ -0.43
FAM47E-209ENST00000606550 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
FAM47E-209ENST00000606550 PHKG2P15735 406 aa12.35□□□□□ -0.43
FAM47E-209ENST00000606550 SLC15A2Q16348 729 aa12.35□□□□□ -0.43
FAM47E-209ENST00000606550 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
FAM47E-209ENST00000606550 HSP90AB1P08238 724 aaKnown RBP12.35□□□□□ -0.43
FAM47E-209ENST00000606550 ZNF316A6NFI3 1004 aaPredicted RBP12.34□□□□□ -0.43
FAM47E-209ENST00000606550 SULT6B1Q6IMI4 303 aa12.34□□□□□ -0.43
FAM47E-209ENST00000606550 DIEXFQ68CQ4 756 aaKnown RBP12.34□□□□□ -0.43
FAM47E-209ENST00000606550 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
FAM47E-209ENST00000606550 PAPPAQ13219 1627 aa12.33□□□□□ -0.43
FAM47E-209ENST00000606550 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
FAM47E-209ENST00000606550 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
FAM47E-209ENST00000606550 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
FAM47E-209ENST00000606550 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms