RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
CUX2P1-201ENST00000606426 TNS2Q63HR2 1409 aa9.99□□□□□ -0.81
CUX2P1-201ENST00000606426 WDR43Q15061 677 aaKnown RBP eCLIP9.98□□□□□ -0.81
CUX2P1-201ENST00000606426 PLEKHO1Q53GL0 409 aaPredicted RBP9.98□□□□□ -0.81
CUX2P1-201ENST00000606426 PCDH11XQ9BZA7 1347 aa9.98□□□□□ -0.81
CUX2P1-201ENST00000606426 PCDH11YQ9BZA8 1340 aa9.98□□□□□ -0.81
CUX2P1-201ENST00000606426 PARP4Q9UKK3 1724 aaKnown RBP9.97□□□□□ -0.81
CUX2P1-201ENST00000606426 FAM196AQ6ZSG2 479 aa9.97□□□□□ -0.81
CUX2P1-201ENST00000606426 BCL9O00512 1426 aa9.97□□□□□ -0.81
CUX2P1-201ENST00000606426 MEGF6O75095 1541 aa9.97□□□□□ -0.81
CUX2P1-201ENST00000606426 HSP90AB1P08238 724 aaKnown RBP9.96□□□□□ -0.82
CUX2P1-201ENST00000606426 HMOX1P09601 288 aa9.96□□□□□ -0.82
CUX2P1-201ENST00000606426 IFNL2Q8IZJ0 200 aa9.96□□□□□ -0.82
CUX2P1-201ENST00000606426 GAS2L2Q8NHY3 880 aa9.96□□□□□ -0.82
CUX2P1-201ENST00000606426 CCDC125Q86Z20 511 aa9.95□□□□□ -0.82
CUX2P1-201ENST00000606426 AEBP1Q8IUX7 1158 aa9.95□□□□□ -0.82
CUX2P1-201ENST00000606426 DDX54Q8TDD1 881 aaKnown RBP9.95□□□□□ -0.82
CUX2P1-201ENST00000606426 RSPH6AQ9H0K4 717 aa9.95□□□□□ -0.82
CUX2P1-201ENST00000606426 MRS2Q9HD23 443 aa9.95□□□□□ -0.82
CUX2P1-201ENST00000606426 RGPD1P0DJD0 1748 aa9.95□□□□□ -0.82
CUX2P1-201ENST00000606426 WNK3Q9BYP7 1800 aa9.94□□□□□ -0.82
CUX2P1-201ENST00000606426 LRRC37A3O60309 1634 aa9.94□□□□□ -0.82
CUX2P1-201ENST00000606426 MAPK8IP3Q9UPT6 1336 aa9.94□□□□□ -0.82
CUX2P1-201ENST00000606426 CCER2I3L3R5 266 aa9.94□□□□□ -0.82
CUX2P1-201ENST00000606426 PRKAR2BP31323 418 aa9.94□□□□□ -0.82
CUX2P1-201ENST00000606426 C1orf141Q5JVX7 400 aa9.94□□□□□ -0.82
CUX2P1-201ENST00000606426 ILDR2Q71H61 639 aa9.94□□□□□ -0.82
CUX2P1-201ENST00000606426 MARCH10Q8NA82 808 aaPredicted RBP9.94□□□□□ -0.82
CUX2P1-201ENST00000606426 PHKG2P15735 406 aa9.93□□□□□ -0.82
CUX2P1-201ENST00000606426 SF3B2Q13435 895 aaKnown RBP9.93□□□□□ -0.82
CUX2P1-201ENST00000606426 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
CUX2P1-201ENST00000606426 AKAP4Q5JQC9 854 aa9.93□□□□□ -0.82
CUX2P1-201ENST00000606426 ZNF530Q6P9A1 599 aaPredicted RBP9.93□□□□□ -0.82
CUX2P1-201ENST00000606426 RGPD2P0DJD1 1756 aa9.93□□□□□ -0.82
CUX2P1-201ENST00000606426 CYP27B1O15528 508 aa9.91□□□□□ -0.82
CUX2P1-201ENST00000606426 MTHFSDQ2M296 383 aaKnown RBP9.91□□□□□ -0.82
CUX2P1-201ENST00000606426 RUNDC1Q96C34 613 aa9.91□□□□□ -0.82
CUX2P1-201ENST00000606426 DCAF5Q96JK2 942 aa9.91□□□□□ -0.82
CUX2P1-201ENST00000606426 ADAMTS8Q9UP79 889 aa9.91□□□□□ -0.82
CUX2P1-201ENST00000606426 PKD1L3Q7Z443 1732 aa9.9□□□□□ -0.82
CUX2P1-201ENST00000606426 GNAT3A8MTJ3 354 aa9.9□□□□□ -0.82
CUX2P1-201ENST00000606426 HTATSF1O43719 755 aaKnown RBP9.9□□□□□ -0.82
CUX2P1-201ENST00000606426 PNISRQ8TF01 805 aaKnown RBP9.9□□□□□ -0.82
CUX2P1-201ENST00000606426 PLEKHF1Q96S99 279 aa9.9□□□□□ -0.82
CUX2P1-201ENST00000606426 BCL11BQ9C0K0 894 aaPredicted RBP9.9□□□□□ -0.82
CUX2P1-201ENST00000606426 ERVV-2B6SEH9 535 aa9.89□□□□□ -0.83
CUX2P1-201ENST00000606426 HMGB2P26583 209 aaKnown RBP9.89□□□□□ -0.83
CUX2P1-201ENST00000606426 LMOD3Q0VAK6 560 aa9.89□□□□□ -0.83
CUX2P1-201ENST00000606426 FAM182BQ5T319 152 aa9.89□□□□□ -0.83
CUX2P1-201ENST00000606426 RTF1Q92541 710 aaKnown RBP9.89□□□□□ -0.83
CUX2P1-201ENST00000606426 PHACTR3Q96KR7 559 aa9.89□□□□□ -0.83
CUX2P1-201ENST00000606426 BRWD3Q6RI45 1802 aa9.89□□□□□ -0.83
CUX2P1-201ENST00000606426 MAP3K5Q99683 1374 aa9.88□□□□□ -0.83
CUX2P1-201ENST00000606426 SOCS7O14512 581 aa9.88□□□□□ -0.83
CUX2P1-201ENST00000606426 TRIM37O94972 964 aa9.88□□□□□ -0.83
CUX2P1-201ENST00000606426 BAG6P46379 1132 aa9.88□□□□□ -0.83
CUX2P1-201ENST00000606426 NFE2L2Q16236 605 aa9.88□□□□□ -0.83
CUX2P1-201ENST00000606426 CCDC184Q52MB2 194 aa9.88□□□□□ -0.83
CUX2P1-201ENST00000606426 UPF1Q92900 1129 aaKnown RBP eCLIP9.88□□□□□ -0.83
CUX2P1-201ENST00000606426 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
CUX2P1-201ENST00000606426 MIER1Q8N108 512 aa9.87□□□□□ -0.83
CUX2P1-201ENST00000606426 SYTL4Q96C24 671 aaPredicted RBP9.87□□□□□ -0.83
CUX2P1-201ENST00000606426 ACSBG1Q96GR2 724 aa9.87□□□□□ -0.83
CUX2P1-201ENST00000606426 TMOD3Q9NYL9 352 aa9.87□□□□□ -0.83
CUX2P1-201ENST00000606426 PLSCR1O15162 318 aa9.86□□□□□ -0.83
CUX2P1-201ENST00000606426 RNMTO43148 476 aaKnown RBP9.86□□□□□ -0.83
CUX2P1-201ENST00000606426 APBA3O96018 575 aa9.86□□□□□ -0.83
CUX2P1-201ENST00000606426 CABP4P57796 275 aa9.86□□□□□ -0.83
CUX2P1-201ENST00000606426 NCBP3Q53F19 620 aaKnown RBP9.86□□□□□ -0.83
CUX2P1-201ENST00000606426 MPRIPQ6WCQ1 1025 aa9.86□□□□□ -0.83
CUX2P1-201ENST00000606426 FAM9BQ8IZU0 186 aa9.86□□□□□ -0.83
CUX2P1-201ENST00000606426 NGEFQ8N5V2 710 aa9.86□□□□□ -0.83
CUX2P1-201ENST00000606426 SMARCC1Q92922 1105 aaPredicted RBP9.86□□□□□ -0.83
CUX2P1-201ENST00000606426 SHANK3Q9BYB0 1731 aa9.85□□□□□ -0.83
CUX2P1-201ENST00000606426 TMPOP42166 694 aaKnown RBP9.85□□□□□ -0.83
CUX2P1-201ENST00000606426 RIPK4P57078 832 aa9.85□□□□□ -0.83
CUX2P1-201ENST00000606426 TEFQ10587 303 aa9.85□□□□□ -0.83
CUX2P1-201ENST00000606426 CCDC146Q8IYE0 955 aa9.85□□□□□ -0.83
CUX2P1-201ENST00000606426 SLC52A2Q9HAB3 445 aa9.85□□□□□ -0.83
CUX2P1-201ENST00000606426 EP400Q96L91 3159 aa9.84□□□□□ -0.83
CUX2P1-201ENST00000606426 KDM6AO15550 1401 aaPredicted RBP9.84□□□□□ -0.83
CUX2P1-201ENST00000606426 KCNQ2O43526 872 aa9.84□□□□□ -0.83
CUX2P1-201ENST00000606426 CALD1Q05682 793 aaKnown RBP9.84□□□□□ -0.83
CUX2P1-201ENST00000606426 CEMIPQ8WUJ3 1361 aa9.84□□□□□ -0.83
CUX2P1-201ENST00000606426 NHSQ6T4R5 1651 aa9.83□□□□□ -0.84
CUX2P1-201ENST00000606426 APAF1O14727 1248 aa9.83□□□□□ -0.84
CUX2P1-201ENST00000606426 NFATC2IPQ8NCF5 419 aa9.83□□□□□ -0.84
CUX2P1-201ENST00000606426 IL17REQ8NFR9 667 aa9.83□□□□□ -0.84
CUX2P1-201ENST00000606426 PIGBQ92521 554 aa9.83□□□□□ -0.84
CUX2P1-201ENST00000606426 LGR6Q9HBX8 967 aa9.83□□□□□ -0.84
CUX2P1-201ENST00000606426 NEUROD2Q15784 382 aa9.82□□□□□ -0.84
CUX2P1-201ENST00000606426 CCDC27Q2M243 656 aa9.82□□□□□ -0.84
CUX2P1-201ENST00000606426 SLC27A3Q5K4L6 730 aa9.82□□□□□ -0.84
CUX2P1-201ENST00000606426 BABAM1Q9NWV8 329 aa9.82□□□□□ -0.84
CUX2P1-201ENST00000606426 MRC1P22897 1456 aa9.82□□□□□ -0.84
CUX2P1-201ENST00000606426 TAF7Q15545 349 aaPredicted RBP9.81□□□□□ -0.84
CUX2P1-201ENST00000606426 MCM10Q7L590 875 aa9.81□□□□□ -0.84
CUX2P1-201ENST00000606426 TTC5Q8N0Z6 440 aa9.81□□□□□ -0.84
CUX2P1-201ENST00000606426 CAMKK2Q96RR4 588 aa9.81□□□□□ -0.84
CUX2P1-201ENST00000606426 DOT1LQ8TEK3 1739 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms