RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 CRB1P82279 1406 aa25.15■■□□□ 1.62
MMP28-201ENST00000605424 SMC5Q8IY18 1101 aa25.15■■□□□ 1.62
MMP28-201ENST00000605424 ELL2O00472 640 aaPredicted RBP25.14■■□□□ 1.62
MMP28-201ENST00000605424 RTF1Q92541 710 aaKnown RBP25.14■■□□□ 1.62
MMP28-201ENST00000605424 MTHFSDQ2M296 383 aaKnown RBP25.13■■□□□ 1.61
MMP28-201ENST00000605424 MCM10Q7L590 875 aa25.13■■□□□ 1.61
MMP28-201ENST00000605424 ZBTB7BO15156 539 aaPredicted RBP25.12■■□□□ 1.61
MMP28-201ENST00000605424 PSME1Q06323 249 aa25.1■■□□□ 1.61
MMP28-201ENST00000605424 ESCO1Q5FWF5 840 aa25.1■■□□□ 1.61
MMP28-201ENST00000605424 KCNH5Q8NCM2 988 aa25.1■■□□□ 1.61
MMP28-201ENST00000605424 NUTM2GQ5VZR2 741 aa25.09■■□□□ 1.61
MMP28-201ENST00000605424 IP6K1Q92551 441 aa25.08■■□□□ 1.6
MMP28-201ENST00000605424 NFAT5O94916 1531 aa25.06■■□□□ 1.6
MMP28-201ENST00000605424 C14orf37Q86TY3 774 aa25.06■■□□□ 1.6
MMP28-201ENST00000605424 PHRF1Q9P1Y6 1649 aaKnown RBP25.06■■□□□ 1.6
MMP28-201ENST00000605424 PROSER2Q86WR7 435 aaPredicted RBP25.06■■□□□ 1.6
MMP28-201ENST00000605424 PTPRCP08575 1304 aa25.05■■□□□ 1.6
MMP28-201ENST00000605424 LTN1O94822 1766 aa25.05■■□□□ 1.6
MMP28-201ENST00000605424 LRRC37A3O60309 1634 aa25.04■■□□□ 1.6
MMP28-201ENST00000605424 BABAM1Q9NWV8 329 aa25.04■■□□□ 1.6
MMP28-201ENST00000605424 GNAT3A8MTJ3 354 aa25.04■■□□□ 1.6
MMP28-201ENST00000605424 FOXO3O43524 673 aa25.04■■□□□ 1.6
MMP28-201ENST00000605424 INTS3Q68E01 1043 aaKnown RBP25.04■■□□□ 1.6
MMP28-201ENST00000605424 GCC1Q96CN9 775 aa25.04■■□□□ 1.6
MMP28-201ENST00000605424 TSPYL4Q9UJ04 414 aa25.03■■□□□ 1.6
MMP28-201ENST00000605424 NUCB1Q02818 461 aa25.02■■□□□ 1.6
MMP28-201ENST00000605424 SOS1Q07889 1333 aaPredicted RBP25.02■■□□□ 1.6
MMP28-201ENST00000605424 TMEM94Q12767 1356 aa25.02■■□□□ 1.6
MMP28-201ENST00000605424 XIRP1Q702N8 1843 aaKnown RBP25.01■■□□□ 1.59
MMP28-201ENST00000605424 LTBP4Q8N2S1 1624 aa25■■□□□ 1.59
MMP28-201ENST00000605424 MAP3K5Q99683 1374 aa25■■□□□ 1.59
MMP28-201ENST00000605424 KIF1AQ12756 1690 aa24.99■■□□□ 1.59
MMP28-201ENST00000605424 KRT24Q2M2I5 525 aa24.98■■□□□ 1.59
MMP28-201ENST00000605424 UPF2Q9HAU5 1272 aaKnown RBP24.98■■□□□ 1.59
MMP28-201ENST00000605424 USP19O94966 1318 aa24.98■■□□□ 1.59
MMP28-201ENST00000605424 DAXXQ9UER7 740 aaPredicted RBP24.98■■□□□ 1.59
MMP28-201ENST00000605424 SLIT3O75094 1523 aa24.97■■□□□ 1.59
MMP28-201ENST00000605424 C19orf44Q9H6X5 657 aa24.97■■□□□ 1.59
MMP28-201ENST00000605424 RGS12O14924 1447 aa24.97■■□□□ 1.59
MMP28-201ENST00000605424 CHD1LQ86WJ1 897 aa24.96■■□□□ 1.59
MMP28-201ENST00000605424 LTV1Q96GA3 475 aaPredicted RBP24.96■■□□□ 1.59
MMP28-201ENST00000605424 ORAI2Q96SN7 254 aa24.96■■□□□ 1.59
MMP28-201ENST00000605424 MST1RQ04912 1400 aa24.95■■□□□ 1.58
MMP28-201ENST00000605424 NCOA3Q9Y6Q9 1424 aa24.94■■□□□ 1.58
MMP28-201ENST00000605424 MSH6P52701 1360 aa24.94■■□□□ 1.58
MMP28-201ENST00000605424 SEC24BO95487 1268 aa24.93■■□□□ 1.58
MMP28-201ENST00000605424 SLC4A2P04920 1241 aa24.93■■□□□ 1.58
MMP28-201ENST00000605424 TAF7Q15545 349 aaPredicted RBP24.93■■□□□ 1.58
MMP28-201ENST00000605424 MIS18AQ9NYP9 233 aa24.93■■□□□ 1.58
MMP28-201ENST00000605424 TRPM3Q9HCF6 1732 aaPredicted RBP24.93■■□□□ 1.58
MMP28-201ENST00000605424 C1orf167Q5SNV9 1468 aa24.93■■□□□ 1.58
MMP28-201ENST00000605424 GCP02774 474 aa24.92■■□□□ 1.58
MMP28-201ENST00000605424 ARHGEF25Q86VW2 580 aa24.92■■□□□ 1.58
MMP28-201ENST00000605424 IL17REQ8NFR9 667 aa24.92■■□□□ 1.58
MMP28-201ENST00000605424 SIRT2Q8IXJ6 389 aa24.91■■□□□ 1.58
MMP28-201ENST00000605424 DCCP43146 1447 aa24.9■■□□□ 1.58
MMP28-201ENST00000605424 CCDC30Q5VVM6 783 aa24.9■■□□□ 1.58
MMP28-201ENST00000605424 NBPF6Q5VWK0 638 aa24.9■■□□□ 1.58
MMP28-201ENST00000605424 KRT28Q7Z3Y7 464 aa24.9■■□□□ 1.58
MMP28-201ENST00000605424 RPAP2Q8IXW5 612 aaPredicted RBP24.9■■□□□ 1.58
MMP28-201ENST00000605424 NBPF4Q96M43 638 aa24.9■■□□□ 1.58
MMP28-201ENST00000605424 STK31Q9BXU1 1019 aa24.9■■□□□ 1.58
MMP28-201ENST00000605424 C1orf115Q9H7X2 142 aa24.9■■□□□ 1.58
MMP28-201ENST00000605424 NCAPD2Q15021 1401 aa24.9■■□□□ 1.58
MMP28-201ENST00000605424 CEMIPQ8WUJ3 1361 aa24.89■■□□□ 1.57
MMP28-201ENST00000605424 TBC1D32Q96NH3 1257 aa24.88■■□□□ 1.57
MMP28-201ENST00000605424 LNPKQ9C0E8 428 aa24.88■■□□□ 1.57
MMP28-201ENST00000605424 ANKRD45Q5TZF3 282 aa24.88■■□□□ 1.57
MMP28-201ENST00000605424 CACNA1FO60840 1977 aa24.88■■□□□ 1.57
MMP28-201ENST00000605424 CCT4P50991 539 aaKnown RBP24.87■■□□□ 1.57
MMP28-201ENST00000605424 USHBP1Q8N6Y0 703 aa24.86■■□□□ 1.57
MMP28-201ENST00000605424 ANKRD44Q8N8A2 993 aa24.86■■□□□ 1.57
MMP28-201ENST00000605424 CHMP4AQ9BY43 222 aa24.86■■□□□ 1.57
MMP28-201ENST00000605424 AMOTQ4VCS5 1084 aa24.86■■□□□ 1.57
MMP28-201ENST00000605424 DCTPP1Q9H773 170 aa24.86■■□□□ 1.57
MMP28-201ENST00000605424 BMP2KLQ5H9B9 411 aa24.85■■□□□ 1.57
MMP28-201ENST00000605424 MED1Q15648 1581 aaPredicted RBP24.85■■□□□ 1.57
MMP28-201ENST00000605424 PLEKHO1Q53GL0 409 aaPredicted RBP24.84■■□□□ 1.57
MMP28-201ENST00000605424 ATF3P18847 181 aa24.84■■□□□ 1.57
MMP28-201ENST00000605424 BECN1Q14457 450 aa24.84■■□□□ 1.57
MMP28-201ENST00000605424 ATP10DQ9P241 1426 aa24.84■■□□□ 1.57
MMP28-201ENST00000605424 AKAP4Q5JQC9 854 aa24.83■■□□□ 1.57
MMP28-201ENST00000605424 USP35Q9P2H5 1018 aa24.83■■□□□ 1.57
MMP28-201ENST00000605424 LMO7Q8WWI1 1683 aa24.83■■□□□ 1.57
MMP28-201ENST00000605424 FAM208AQ9UK61 1670 aaKnown RBP24.83■■□□□ 1.57
MMP28-201ENST00000605424 CAMTA1Q9Y6Y1 1673 aa24.82■■□□□ 1.56
MMP28-201ENST00000605424 XPCQ01831 940 aaPredicted RBP24.82■■□□□ 1.56
MMP28-201ENST00000605424 ALS2Q96Q42 1657 aa24.82■■□□□ 1.56
MMP28-201ENST00000605424 HOXB7P09629 217 aa24.81■■□□□ 1.56
MMP28-201ENST00000605424 NBR1Q14596 966 aa24.81■■□□□ 1.56
MMP28-201ENST00000605424 CEP85Q6P2H3 762 aa24.8■■□□□ 1.56
MMP28-201ENST00000605424 G2E3Q7L622 706 aa24.8■■□□□ 1.56
MMP28-201ENST00000605424 OVOS2A0A0G2JMS6 1433 aa24.8■■□□□ 1.56
MMP28-201ENST00000605424 ZBTB7CA1YPR0 619 aa24.8■■□□□ 1.56
MMP28-201ENST00000605424 RTL5Q5HYW3 569 aaPredicted RBP24.8■■□□□ 1.56
MMP28-201ENST00000605424 RGPD2P0DJD1 1756 aa24.8■■□□□ 1.56
MMP28-201ENST00000605424 FLIIQ13045 1269 aa24.79■■□□□ 1.56
MMP28-201ENST00000605424 LMOD2Q6P5Q4 547 aa24.79■■□□□ 1.56
MMP28-201ENST00000605424 ANKRD24Q8TF21 1146 aa24.79■■□□□ 1.56
MMP28-201ENST00000605424 LRRC59Q96AG4 307 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms