RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 SOWAHDA6NJG2 315 aa7.59□□□□□ -1.2
TUBE1-209ENST00000604814 ARID4AP29374 1257 aaPredicted RBP7.59□□□□□ -1.2
TUBE1-209ENST00000604814 Q6ZNB5 142 aa7.59□□□□□ -1.2
TUBE1-209ENST00000604814 BPHLQ86WA6 291 aaPredicted RBP7.59□□□□□ -1.2
TUBE1-209ENST00000604814 SNIP1Q8TAD8 396 aaKnown RBP7.59□□□□□ -1.2
TUBE1-209ENST00000604814 GPKOWQ92917 476 aaPredicted RBP eCLIP7.59□□□□□ -1.26e-6■■□□□ 12
TUBE1-209ENST00000604814 ALG2Q9H553 416 aa7.59□□□□□ -1.2
TUBE1-209ENST00000604814 PLEKHD1A6NEE1 506 aa7.58□□□□□ -1.2
TUBE1-209ENST00000604814 FAM187AA6NFU0 413 aa7.58□□□□□ -1.2
TUBE1-209ENST00000604814 VARSP26640 1264 aaKnown RBP7.58□□□□□ -1.2
TUBE1-209ENST00000604814 PRDM16Q9HAZ2 1276 aa7.58□□□□□ -1.2
TUBE1-209ENST00000604814 RIPOR2Q9Y4F9 1068 aa7.58□□□□□ -1.2
TUBE1-209ENST00000604814 LOC102724159A0A0B4J2E5 919 aa7.57□□□□□ -1.2
TUBE1-209ENST00000604814 MAGEB6P1A0A0J9YX57 407 aa7.57□□□□□ -1.2
TUBE1-209ENST00000604814 ERCC5P28715 1186 aaPredicted RBP7.57□□□□□ -1.2
TUBE1-209ENST00000604814 PWP2Q15269 919 aaKnown RBP7.57□□□□□ -1.2
TUBE1-209ENST00000604814 PKDCCQ504Y2 493 aa7.57□□□□□ -1.2
TUBE1-209ENST00000604814 TMEM164Q5U3C3 297 aa7.57□□□□□ -1.2
TUBE1-209ENST00000604814 TRIM34Q9BYJ4 488 aa7.57□□□□□ -1.2
TUBE1-209ENST00000604814 TOR4AQ9NXH8 423 aa7.57□□□□□ -1.2
TUBE1-209ENST00000604814 BIN2Q9UBW5 565 aaPredicted RBP7.57□□□□□ -1.2
TUBE1-209ENST00000604814 PPME1Q9Y570 386 aa7.57□□□□□ -1.2
TUBE1-209ENST00000604814 PDXDC2PQ6P474 469 aa7.56□□□□□ -1.2
TUBE1-209ENST00000604814 FAM174AQ8TBP5 190 aa7.56□□□□□ -1.2
TUBE1-209ENST00000604814 GJD4Q96KN9 370 aaPredicted RBP7.56□□□□□ -1.2
TUBE1-209ENST00000604814 CARD14Q9BXL6 1004 aa7.56□□□□□ -1.2
TUBE1-209ENST00000604814 RAB11FIP3O75154 756 aa7.56□□□□□ -1.2
TUBE1-209ENST00000604814 ALDH1A1P00352 501 aa7.56□□□□□ -1.2
TUBE1-209ENST00000604814 TSNAXIP1Q2TAA8 658 aa7.56□□□□□ -1.2
TUBE1-209ENST00000604814 STK32AQ8WU08 396 aa7.56□□□□□ -1.2
TUBE1-209ENST00000604814 ARHGAP9Q9BRR9 750 aa7.56□□□□□ -1.2
TUBE1-209ENST00000604814 PTK2Q05397 1052 aa7.55□□□□□ -1.2
TUBE1-209ENST00000604814 ARID5BQ14865 1188 aa7.55□□□□□ -1.2
TUBE1-209ENST00000604814 ZMIZ1Q9ULJ6 1067 aa7.55□□□□□ -1.2
TUBE1-209ENST00000604814 TMA7Q9Y2S6 64 aaKnown RBP7.55□□□□□ -1.2
TUBE1-209ENST00000604814 J3QL48 77 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 SIAH2O43255 324 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 DGAT1O75907 488 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 SERPINB4P48594 390 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 IRX6P78412 446 aaPredicted RBP7.54□□□□□ -1.2
TUBE1-209ENST00000604814 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 ZBTB33Q86T24 672 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 NOP9Q86U38 636 aaKnown RBP7.54□□□□□ -1.2
TUBE1-209ENST00000604814 DNAJC2Q99543 621 aaKnown RBP7.54□□□□□ -1.2
TUBE1-209ENST00000604814 TAGLNQ01995 201 aaKnown RBP7.54□□□□□ -1.2
TUBE1-209ENST00000604814 MYH16Q9H6N6 1097 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.54□□□□□ -1.2
TUBE1-209ENST00000604814 TLL2Q9Y6L7 1015 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 WASF2Q9Y6W5 498 aa7.54□□□□□ -1.2
TUBE1-209ENST00000604814 SSFA2P28290 1259 aa7.53□□□□□ -1.2
TUBE1-209ENST00000604814 ELOAQ14241 798 aaKnown RBP7.53□□□□□ -1.2
TUBE1-209ENST00000604814 SH3RF1Q7Z6J0 888 aa7.53□□□□□ -1.2
TUBE1-209ENST00000604814 GPR37L1O60883 481 aa7.52□□□□□ -1.21
TUBE1-209ENST00000604814 SMPD1P17405 629 aa7.52□□□□□ -1.21
TUBE1-209ENST00000604814 TBC1D9Q6ZT07 1266 aa7.52□□□□□ -1.21
TUBE1-209ENST00000604814 TANGO6Q9C0B7 1094 aa7.51□□□□□ -1.21
TUBE1-209ENST00000604814 LNPKQ9C0E8 428 aa7.51□□□□□ -1.21
TUBE1-209ENST00000604814 SUGT1Q9Y2Z0 365 aa7.51□□□□□ -1.21
TUBE1-209ENST00000604814 GPSM3Q9Y4H4 160 aa7.51□□□□□ -1.21
TUBE1-209ENST00000604814 SBNO2Q9Y2G9 1366 aa7.51□□□□□ -1.21
TUBE1-209ENST00000604814 TPD52L2O43399 206 aaKnown RBP7.51□□□□□ -1.21
TUBE1-209ENST00000604814 ERFEQ4G0M1 354 aa7.51□□□□□ -1.21
TUBE1-209ENST00000604814 CDCA7Q9BWT1 371 aaPredicted RBP7.51□□□□□ -1.21
TUBE1-209ENST00000604814 NOVA2Q9UNW9 492 aaKnown RBP7.51□□□□□ -1.21
TUBE1-209ENST00000604814 GORABQ5T7V8 394 aa7.5□□□□□ -1.21
TUBE1-209ENST00000604814 TRAF7Q6Q0C0 670 aa7.5□□□□□ -1.21
TUBE1-209ENST00000604814 FBXO33Q7Z6M2 555 aa7.5□□□□□ -1.21
TUBE1-209ENST00000604814 ADAM32Q8TC27 787 aa7.5□□□□□ -1.21
TUBE1-209ENST00000604814 C1QTNF2Q9BXJ5 285 aa7.5□□□□□ -1.21
TUBE1-209ENST00000604814 ATP9BO43861 1147 aa7.49□□□□□ -1.21
TUBE1-209ENST00000604814 KANK4Q5T7N3 995 aaPredicted RBP7.49□□□□□ -1.21
TUBE1-209ENST00000604814 VASH1Q7L8A9 365 aaPredicted RBP7.49□□□□□ -1.21
TUBE1-209ENST00000604814 MPNDQ8N594 471 aa7.49□□□□□ -1.21
TUBE1-209ENST00000604814 SLC10A4Q96EP9 437 aa7.49□□□□□ -1.21
TUBE1-209ENST00000604814 BCL11AQ9H165 835 aa7.49□□□□□ -1.21
TUBE1-209ENST00000604814 ZBBXA8MT70 800 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 SOX11P35716 441 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 SEMA3FQ13275 785 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 C9orf131Q5VYM1 1079 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 EXOC8Q8IYI6 725 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 HPS1Q92902 700 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 GPATCH3Q96I76 525 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 CDK15Q96Q40 435 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 TLDC2A0PJX2 215 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 ADH1CP00326 375 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 DZIP3Q86Y13 1208 aaKnown RBP7.48□□□□□ -1.21
TUBE1-209ENST00000604814 TRMT44Q8IYL2 757 aaKnown RBP7.48□□□□□ -1.21
TUBE1-209ENST00000604814 PIK3R5Q8WYR1 880 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 OCSTAMPQ9BR26 566 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 SLC52A1Q9NWF4 448 aa7.48□□□□□ -1.21
TUBE1-209ENST00000604814 FBXO45P0C2W1 286 aa7.47□□□□□ -1.21
TUBE1-209ENST00000604814 CUEDC1Q9NWM3 386 aaPredicted RBP7.47□□□□□ -1.21
TUBE1-209ENST00000604814 SLAIN2Q9P270 581 aa7.47□□□□□ -1.21
TUBE1-209ENST00000604814 HDLBPQ00341 1268 aaKnown RBP7.46□□□□□ -1.21
TUBE1-209ENST00000604814 NNTQ13423 1086 aa7.46□□□□□ -1.21
TUBE1-209ENST00000604814 BACH2Q9BYV9 841 aa7.46□□□□□ -1.21
TUBE1-209ENST00000604814 METTL14Q9HCE5 456 aaKnown RBP7.46□□□□□ -1.21
TUBE1-209ENST00000604814 KLHL42Q9P2K6 505 aa7.46□□□□□ -1.21
TUBE1-209ENST00000604814 hCG_2014768A0A024R1R8 64 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms