RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 IPO9Q96P70 1041 aaKnown RBP19.14■□□□□ 0.66
CCDC12-211ENST00000604367 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.66
CCDC12-211ENST00000604367 ANP32EQ9BTT0 268 aa19.14■□□□□ 0.65
CCDC12-211ENST00000604367 C19orf44Q9H6X5 657 aa19.14■□□□□ 0.65
CCDC12-211ENST00000604367 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
CCDC12-211ENST00000604367 CRB1P82279 1406 aa19.14■□□□□ 0.65
CCDC12-211ENST00000604367 IP6K1Q92551 441 aa19.13■□□□□ 0.65
CCDC12-211ENST00000604367 KCNH5Q8NCM2 988 aa19.13■□□□□ 0.65
CCDC12-211ENST00000604367 ARHGAP45Q92619 1136 aa19.13■□□□□ 0.65
CCDC12-211ENST00000604367 TSPYL4Q9UJ04 414 aa19.12■□□□□ 0.65
CCDC12-211ENST00000604367 RTL1A6NKG5 1358 aa19.12■□□□□ 0.65
CCDC12-211ENST00000604367 NFAT5O94916 1531 aa19.11■□□□□ 0.65
CCDC12-211ENST00000604367 KRT28Q7Z3Y7 464 aa19.11■□□□□ 0.65
CCDC12-211ENST00000604367 GNAT3A8MTJ3 354 aa19.1■□□□□ 0.65
CCDC12-211ENST00000604367 GCP02774 474 aa19.1■□□□□ 0.65
CCDC12-211ENST00000604367 NOP58Q9Y2X3 529 aaKnown RBP19.1■□□□□ 0.65
CCDC12-211ENST00000604367 TMEM94Q12767 1356 aa19.1■□□□□ 0.65
CCDC12-211ENST00000604367 NBPF6Q5VWK0 638 aa19.1■□□□□ 0.65
CCDC12-211ENST00000604367 NBPF4Q96M43 638 aa19.1■□□□□ 0.65
CCDC12-211ENST00000604367 C1orf167Q5SNV9 1468 aa19.09■□□□□ 0.65
CCDC12-211ENST00000604367 ATF3P18847 181 aa19.09■□□□□ 0.65
CCDC12-211ENST00000604367 HDAC1Q13547 482 aaPredicted RBP19.09■□□□□ 0.65
CCDC12-211ENST00000604367 ZBTB7BO15156 539 aaPredicted RBP19.09■□□□□ 0.65
CCDC12-211ENST00000604367 C1orf115Q9H7X2 142 aa19.09■□□□□ 0.65
CCDC12-211ENST00000604367 API5Q9BZZ5 524 aaKnown RBP19.08■□□□□ 0.64
CCDC12-211ENST00000604367 ABCC4O15439 1325 aa19.08■□□□□ 0.64
CCDC12-211ENST00000604367 KIAA0232Q92628 1395 aa19.08■□□□□ 0.64
CCDC12-211ENST00000604367 HAP1P54257 671 aaPredicted RBP19.08■□□□□ 0.64
CCDC12-211ENST00000604367 LRRC59Q96AG4 307 aaKnown RBP19.08■□□□□ 0.64
CCDC12-211ENST00000604367 DDX17Q92841 729 aaKnown RBP19.07■□□□□ 0.64
CCDC12-211ENST00000604367 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
CCDC12-211ENST00000604367 HTATSF1O43719 755 aaKnown RBP19.05■□□□□ 0.64
CCDC12-211ENST00000604367 IL17REQ8NFR9 667 aa19.05■□□□□ 0.64
CCDC12-211ENST00000604367 ARHGEF25Q86VW2 580 aa19.05■□□□□ 0.64
CCDC12-211ENST00000604367 MAP3K5Q99683 1374 aa19.05■□□□□ 0.64
CCDC12-211ENST00000604367 STRCP1A6NGW2 1772 aa19.04■□□□□ 0.64
CCDC12-211ENST00000604367 SLC4A2P04920 1241 aa19.04■□□□□ 0.64
CCDC12-211ENST00000604367 MSH6P52701 1360 aa19.04■□□□□ 0.64
CCDC12-211ENST00000604367 CHMP4BQ9H444 224 aaKnown RBP19.03■□□□□ 0.64
CCDC12-211ENST00000604367 RGPD2P0DJD1 1756 aa19.02■□□□□ 0.64
CCDC12-211ENST00000604367 SMC5Q8IY18 1101 aa19.02■□□□□ 0.64
CCDC12-211ENST00000604367 MST1RQ04912 1400 aa19.02■□□□□ 0.64
CCDC12-211ENST00000604367 TRPM3Q9HCF6 1732 aaPredicted RBP19.01■□□□□ 0.63
CCDC12-211ENST00000604367 AXIN2Q9Y2T1 843 aa19.01■□□□□ 0.63
CCDC12-211ENST00000604367 ZC3H6P61129 1189 aaKnown RBP19.01■□□□□ 0.63
CCDC12-211ENST00000604367 KIF1AQ12756 1690 aa19.01■□□□□ 0.63
CCDC12-211ENST00000604367 SLIT3O75094 1523 aa19■□□□□ 0.63
CCDC12-211ENST00000604367 USP19O94966 1318 aa19■□□□□ 0.63
CCDC12-211ENST00000604367 ANKRD24Q8TF21 1146 aa19■□□□□ 0.63
CCDC12-211ENST00000604367 NECTIN2Q92692 538 aa19■□□□□ 0.63
CCDC12-211ENST00000604367 TAF7Q15545 349 aaPredicted RBP19■□□□□ 0.63
CCDC12-211ENST00000604367 DAXXQ9UER7 740 aaPredicted RBP19■□□□□ 0.63
CCDC12-211ENST00000604367 RGS12O14924 1447 aa18.99■□□□□ 0.63
CCDC12-211ENST00000604367 SEC24BO95487 1268 aa18.99■□□□□ 0.63
CCDC12-211ENST00000604367 G2E3Q7L622 706 aa18.99■□□□□ 0.63
CCDC12-211ENST00000604367 PTPRCP08575 1304 aa18.98■□□□□ 0.63
CCDC12-211ENST00000604367 LRRC37A3O60309 1634 aa18.98■□□□□ 0.63
CCDC12-211ENST00000604367 CADPS2Q86UW7 1296 aa18.98■□□□□ 0.63
CCDC12-211ENST00000604367 PHRF1Q9P1Y6 1649 aaKnown RBP18.98■□□□□ 0.63
CCDC12-211ENST00000604367 INTS3Q68E01 1043 aaKnown RBP18.98■□□□□ 0.63
CCDC12-211ENST00000604367 LGR6Q9HBX8 967 aa18.98■□□□□ 0.63
CCDC12-211ENST00000604367 SIRT2Q8IXJ6 389 aa18.97■□□□□ 0.63
CCDC12-211ENST00000604367 LNPKQ9C0E8 428 aa18.97■□□□□ 0.63
CCDC12-211ENST00000604367 ZNF530Q6P9A1 599 aaPredicted RBP18.96■□□□□ 0.63
CCDC12-211ENST00000604367 CABLES1Q8TDN4 633 aa18.96■□□□□ 0.63
CCDC12-211ENST00000604367 STK31Q9BXU1 1019 aa18.96■□□□□ 0.63
CCDC12-211ENST00000604367 F6X3S4 739 aa18.95■□□□□ 0.62
CCDC12-211ENST00000604367 NUCB1Q02818 461 aa18.95■□□□□ 0.62
CCDC12-211ENST00000604367 SLC4A10Q6U841 1118 aa18.95■□□□□ 0.62
CCDC12-211ENST00000604367 VIRMAQ69YN4 1812 aaKnown RBP18.95■□□□□ 0.62
CCDC12-211ENST00000604367 PLEKHO1Q53GL0 409 aaPredicted RBP18.95■□□□□ 0.62
CCDC12-211ENST00000604367 MPRIPQ6WCQ1 1025 aa18.95■□□□□ 0.62
CCDC12-211ENST00000604367 DCCP43146 1447 aa18.94■□□□□ 0.62
CCDC12-211ENST00000604367 ANKRD45Q5TZF3 282 aa18.94■□□□□ 0.62
CCDC12-211ENST00000604367 CHD1LQ86WJ1 897 aa18.94■□□□□ 0.62
CCDC12-211ENST00000604367 DDRGK1Q96HY6 314 aa18.94■□□□□ 0.62
CCDC12-211ENST00000604367 CCDC30Q5VVM6 783 aa18.93■□□□□ 0.62
CCDC12-211ENST00000604367 NPHP3Q7Z494 1330 aa18.93■□□□□ 0.62
CCDC12-211ENST00000604367 CEMIPQ8WUJ3 1361 aa18.93■□□□□ 0.62
CCDC12-211ENST00000604367 ALS2Q96Q42 1657 aa18.93■□□□□ 0.62
CCDC12-211ENST00000604367 MED1Q15648 1581 aaPredicted RBP18.93■□□□□ 0.62
CCDC12-211ENST00000604367 NCOA3Q9Y6Q9 1424 aa18.93■□□□□ 0.62
CCDC12-211ENST00000604367 AKAP4Q5JQC9 854 aa18.92■□□□□ 0.62
CCDC12-211ENST00000604367 GCC1Q96CN9 775 aa18.92■□□□□ 0.62
CCDC12-211ENST00000604367 RGPD5Q99666 1765 aa18.92■□□□□ 0.62
CCDC12-211ENST00000604367 MEIS3Q99687 375 aa18.92■□□□□ 0.62
CCDC12-211ENST00000604367 BABAM1Q9NWV8 329 aa18.92■□□□□ 0.62
CCDC12-211ENST00000604367 ERBB3P21860 1342 aa18.92■□□□□ 0.62
CCDC12-211ENST00000604367 SLC4A3P48751 1232 aa18.91■□□□□ 0.62
CCDC12-211ENST00000604367 TEFQ10587 303 aa18.91■□□□□ 0.62
CCDC12-211ENST00000604367 AMOTQ4VCS5 1084 aa18.91■□□□□ 0.62
CCDC12-211ENST00000604367 C1orf141Q5JVX7 400 aa18.91■□□□□ 0.62
CCDC12-211ENST00000604367 FKBP5Q13451 457 aaPredicted RBP18.91■□□□□ 0.62
CCDC12-211ENST00000604367 PXDNQ92626 1479 aa18.9■□□□□ 0.62
CCDC12-211ENST00000604367 FLIIQ13045 1269 aa18.9■□□□□ 0.62
CCDC12-211ENST00000604367 KCNQ3O43525 872 aa18.9■□□□□ 0.62
CCDC12-211ENST00000604367 LMTK3Q96Q04 1460 aa18.89■□□□□ 0.61
CCDC12-211ENST00000604367 HDGFL1Q5TGJ6 251 aa18.89■□□□□ 0.61
CCDC12-211ENST00000604367 NLRP2Q9NX02 1062 aa18.89■□□□□ 0.61
CCDC12-211ENST00000604367 EIF2S2P20042 333 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms