RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
SRGAP2-209ENST00000604247 ARXQ96QS3 562 aa16.18■□□□□ 0.18
SRGAP2-209ENST00000604247 NCOA3Q9Y6Q9 1424 aa16.17■□□□□ 0.18
SRGAP2-209ENST00000604247 PEAK1Q9H792 1746 aa16.17■□□□□ 0.18
SRGAP2-209ENST00000604247 FOXO3O43524 673 aa16.17■□□□□ 0.18
SRGAP2-209ENST00000604247 TRAK2O60296 914 aa16.16■□□□□ 0.18
SRGAP2-209ENST00000604247 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
SRGAP2-209ENST00000604247 RGS12O14924 1447 aa16.16■□□□□ 0.18
SRGAP2-209ENST00000604247 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
SRGAP2-209ENST00000604247 THEMISQ8N1K5 641 aaPredicted RBP16.16■□□□□ 0.18
SRGAP2-209ENST00000604247 KCNA6P17658 529 aa16.15■□□□□ 0.18
SRGAP2-209ENST00000604247 ANKRD44Q8N8A2 993 aa16.15■□□□□ 0.18
SRGAP2-209ENST00000604247 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
SRGAP2-209ENST00000604247 CDC45O75419 566 aa16.14■□□□□ 0.18
SRGAP2-209ENST00000604247 OTUD7AQ8TE49 926 aaPredicted RBP16.14■□□□□ 0.18
SRGAP2-209ENST00000604247 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.17
SRGAP2-209ENST00000604247 APBB1O00213 710 aa16.14■□□□□ 0.17
SRGAP2-209ENST00000604247 SLC4A2P04920 1241 aa16.14■□□□□ 0.17
SRGAP2-209ENST00000604247 MEIS3Q99687 375 aa16.14■□□□□ 0.17
SRGAP2-209ENST00000604247 USP31Q70CQ4 1352 aa16.14■□□□□ 0.17
SRGAP2-209ENST00000604247 KIAA0232Q92628 1395 aa16.14■□□□□ 0.17
SRGAP2-209ENST00000604247 MTHFSDQ2M296 383 aaKnown RBP16.13■□□□□ 0.17
SRGAP2-209ENST00000604247 CEP85Q6P2H3 762 aa16.13■□□□□ 0.17
SRGAP2-209ENST00000604247 ATP10DQ9P241 1426 aa16.13■□□□□ 0.17
SRGAP2-209ENST00000604247 DIP2AQ14689 1571 aa16.13■□□□□ 0.17
SRGAP2-209ENST00000604247 HAP1P54257 671 aaPredicted RBP16.13■□□□□ 0.17
SRGAP2-209ENST00000604247 MSH6P52701 1360 aa16.13■□□□□ 0.17
SRGAP2-209ENST00000604247 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
SRGAP2-209ENST00000604247 L1TD1Q5T7N2 865 aaKnown RBP16.12■□□□□ 0.17
SRGAP2-209ENST00000604247 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
SRGAP2-209ENST00000604247 TNPO1Q92973 898 aaKnown RBP16.12■□□□□ 0.17
SRGAP2-209ENST00000604247 CRB1P82279 1406 aa16.12■□□□□ 0.17
SRGAP2-209ENST00000604247 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
SRGAP2-209ENST00000604247 RGPD1P0DJD0 1748 aa16.12■□□□□ 0.17
SRGAP2-209ENST00000604247 RGPD8O14715 1765 aaPredicted RBP16.12■□□□□ 0.17
SRGAP2-209ENST00000604247 G2E3Q7L622 706 aa16.11■□□□□ 0.17
SRGAP2-209ENST00000604247 XRN1Q8IZH2 1706 aaKnown RBP16.11■□□□□ 0.17
SRGAP2-209ENST00000604247 RTL1A6NKG5 1358 aa16.11■□□□□ 0.17
SRGAP2-209ENST00000604247 PTPRCP08575 1304 aa16.11■□□□□ 0.17
SRGAP2-209ENST00000604247 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
SRGAP2-209ENST00000604247 HSP90AA1P07900 732 aaKnown RBP16.11■□□□□ 0.17
SRGAP2-209ENST00000604247 XRCC6P12956 609 aaKnown RBP eCLIP16.11■□□□□ 0.172e-8■■■■■ 39.1
SRGAP2-209ENST00000604247 RIMS1Q86UR5 1692 aaKnown RBP16.1■□□□□ 0.17
SRGAP2-209ENST00000604247 GOLGA6L3A6NEY3 463 aa16.1■□□□□ 0.17
SRGAP2-209ENST00000604247 F6X3S4 739 aa16.1■□□□□ 0.17
SRGAP2-209ENST00000604247 K7ELQ4 463 aaPredicted RBP16.1■□□□□ 0.17
SRGAP2-209ENST00000604247 FSD2A1L4K1 749 aa16.1■□□□□ 0.17
SRGAP2-209ENST00000604247 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
SRGAP2-209ENST00000604247 SLC4A10Q6U841 1118 aa16.09■□□□□ 0.17
SRGAP2-209ENST00000604247 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
SRGAP2-209ENST00000604247 ANO8Q9HCE9 1232 aaPredicted RBP16.09■□□□□ 0.17
SRGAP2-209ENST00000604247 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
SRGAP2-209ENST00000604247 DDX11L8A8MPP1 907 aa16.09■□□□□ 0.17
SRGAP2-209ENST00000604247 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
SRGAP2-209ENST00000604247 GAS2L2Q8NHY3 880 aa16.09■□□□□ 0.17
SRGAP2-209ENST00000604247 EYA1Q99502 592 aa16.09■□□□□ 0.17
SRGAP2-209ENST00000604247 RAB3GAP1Q15042 981 aa16.08■□□□□ 0.17
SRGAP2-209ENST00000604247 CIZ1Q9ULV3 898 aaPredicted RBP16.08■□□□□ 0.17
SRGAP2-209ENST00000604247 SDSP20132 328 aa16.08■□□□□ 0.16
SRGAP2-209ENST00000604247 AMPHP49418 695 aa16.08■□□□□ 0.16
SRGAP2-209ENST00000604247 CEP170BQ9Y4F5 1589 aaPredicted RBP16.08■□□□□ 0.16
SRGAP2-209ENST00000604247 ARHGEF10O15013 1369 aa16.07■□□□□ 0.16
SRGAP2-209ENST00000604247 PANK2Q9BZ23 570 aa16.07■□□□□ 0.16
SRGAP2-209ENST00000604247 NUTM2GQ5VZR2 741 aa16.07■□□□□ 0.16
SRGAP2-209ENST00000604247 TTC21AQ8NDW8 1320 aa16.07■□□□□ 0.16
SRGAP2-209ENST00000604247 FAM43AQ8N2R8 423 aa16.06■□□□□ 0.16
SRGAP2-209ENST00000604247 USP26Q9BXU7 913 aa16.06■□□□□ 0.16
SRGAP2-209ENST00000604247 FLT4P35916 1363 aa16.06■□□□□ 0.16
SRGAP2-209ENST00000604247 PIK3C2AO00443 1686 aa16.06■□□□□ 0.16
SRGAP2-209ENST00000604247 SBNO1A3KN83 1393 aa16.06■□□□□ 0.16
SRGAP2-209ENST00000604247 FMN2Q9NZ56 1722 aa16.05■□□□□ 0.16
SRGAP2-209ENST00000604247 AK9Q5TCS8 1911 aa16.04■□□□□ 0.16
SRGAP2-209ENST00000604247 NLRP6P59044 892 aa16.04■□□□□ 0.16
SRGAP2-209ENST00000604247 GBP4Q96PP9 640 aa16.04■□□□□ 0.16
SRGAP2-209ENST00000604247 KDRP35968 1356 aa16.04■□□□□ 0.16
SRGAP2-209ENST00000604247 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
SRGAP2-209ENST00000604247 IGSF1Q8N6C5 1336 aa16.04■□□□□ 0.16
SRGAP2-209ENST00000604247 SSFA2P28290 1259 aa16.03■□□□□ 0.16
SRGAP2-209ENST00000604247 RABEP1Q15276 862 aa16.03■□□□□ 0.16
SRGAP2-209ENST00000604247 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
SRGAP2-209ENST00000604247 CCT4P50991 539 aaKnown RBP16.02■□□□□ 0.16
SRGAP2-209ENST00000604247 MARF1Q9Y4F3 1742 aaKnown RBP16.01■□□□□ 0.15
SRGAP2-209ENST00000604247 HMMRO75330 724 aa16.01■□□□□ 0.15
SRGAP2-209ENST00000604247 EXOC6BQ9Y2D4 811 aa16.01■□□□□ 0.15
SRGAP2-209ENST00000604247 ANKARQ7Z5J8 1434 aa16.01■□□□□ 0.15
SRGAP2-209ENST00000604247 STK31Q9BXU1 1019 aa16.01■□□□□ 0.15
SRGAP2-209ENST00000604247 RRAGDQ9NQL2 400 aaPredicted RBP16.01■□□□□ 0.15
SRGAP2-209ENST00000604247 LTV1Q96GA3 475 aaPredicted RBP16■□□□□ 0.15
SRGAP2-209ENST00000604247 GNAT3A8MTJ3 354 aa16■□□□□ 0.15
SRGAP2-209ENST00000604247 GNAI2P04899 355 aa16■□□□□ 0.15
SRGAP2-209ENST00000604247 MRE11P49959 708 aa16■□□□□ 0.15
SRGAP2-209ENST00000604247 PDE1AP54750 535 aa16■□□□□ 0.15
SRGAP2-209ENST00000604247 FKBP5Q13451 457 aaPredicted RBP16■□□□□ 0.15
SRGAP2-209ENST00000604247 TSHZ3Q63HK5 1081 aa16■□□□□ 0.15
SRGAP2-209ENST00000604247 CASC1Q6TDU7 716 aa16■□□□□ 0.15
SRGAP2-209ENST00000604247 EIF5BO60841 1220 aaKnown RBP15.99■□□□□ 0.15
SRGAP2-209ENST00000604247 HOXC9P31274 260 aa15.99■□□□□ 0.15
SRGAP2-209ENST00000604247 FLIIQ13045 1269 aa15.99■□□□□ 0.15
SRGAP2-209ENST00000604247 IL17REQ8NFR9 667 aa15.99■□□□□ 0.15
SRGAP2-209ENST00000604247 GRPEL1Q9HAV7 217 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms