RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 PRG4Q92954 1404 aaPredicted RBP24.81■■□□□ 1.56
SH3D19-211ENST00000604030 CNNM1Q9NRU3 951 aa24.81■■□□□ 1.56
SH3D19-211ENST00000604030 NSD3Q9BZ95 1437 aa24.8■■□□□ 1.56
SH3D19-211ENST00000604030 AACSQ86V21 672 aa24.8■■□□□ 1.56
SH3D19-211ENST00000604030 KIF1BPQ96EK5 621 aa24.8■■□□□ 1.56
SH3D19-211ENST00000604030 GLRX3O76003 335 aaKnown RBP24.8■■□□□ 1.56
SH3D19-211ENST00000604030 LRPPRCP42704 1394 aaKnown RBP24.8■■□□□ 1.56
SH3D19-211ENST00000604030 DEF6Q9H4E7 631 aa24.8■■□□□ 1.56
SH3D19-211ENST00000604030 FAM69CQ0P6D2 419 aa24.79■■□□□ 1.56
SH3D19-211ENST00000604030 CEP131Q9UPN4 1083 aa24.79■■□□□ 1.56
SH3D19-211ENST00000604030 RARSP54136 660 aaKnown RBP24.79■■□□□ 1.56
SH3D19-211ENST00000604030 SPG7Q9UQ90 795 aa24.79■■□□□ 1.56
SH3D19-211ENST00000604030 NEMFO60524 1076 aa24.79■■□□□ 1.56
SH3D19-211ENST00000604030 KRT18P05783 430 aaKnown RBP24.78■■□□□ 1.56
SH3D19-211ENST00000604030 STK3Q13188 491 aa24.78■■□□□ 1.56
SH3D19-211ENST00000604030 ZNF530Q6P9A1 599 aaPredicted RBP24.78■■□□□ 1.56
SH3D19-211ENST00000604030 UBXN4Q92575 508 aa24.78■■□□□ 1.56
SH3D19-211ENST00000604030 CTAGE5O15320 804 aa24.78■■□□□ 1.56
SH3D19-211ENST00000604030 ZFYVE27Q5T4F4 411 aa24.78■■□□□ 1.56
SH3D19-211ENST00000604030 ZSCAN12O43309 604 aa24.77■■□□□ 1.56
SH3D19-211ENST00000604030 MSH5O43196 834 aa24.77■■□□□ 1.56
SH3D19-211ENST00000604030 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
SH3D19-211ENST00000604030 ZRSR2Q15696 482 aaKnown RBP24.77■■□□□ 1.56
SH3D19-211ENST00000604030 ANO10Q9NW15 660 aa24.76■■□□□ 1.55
SH3D19-211ENST00000604030 MX1P20591 662 aa24.76■■□□□ 1.55
SH3D19-211ENST00000604030 TXNDC2Q86VQ3 553 aa24.75■■□□□ 1.55
SH3D19-211ENST00000604030 SYCE3A1L190 88 aa24.75■■□□□ 1.55
SH3D19-211ENST00000604030 NUTM2GQ5VZR2 741 aa24.75■■□□□ 1.55
SH3D19-211ENST00000604030 NCOA1Q15788 1441 aa24.74■■□□□ 1.55
SH3D19-211ENST00000604030 CEP126Q9P2H0 1117 aa24.74■■□□□ 1.55
SH3D19-211ENST00000604030 ANKRD18AQ8IVF6 992 aa24.74■■□□□ 1.55
SH3D19-211ENST00000604030 CWC27Q6UX04 472 aaKnown RBP24.73■■□□□ 1.55
SH3D19-211ENST00000604030 BMP2KQ9NSY1 1161 aaPredicted RBP24.73■■□□□ 1.55
SH3D19-211ENST00000604030 SFPQP23246 707 aaKnown RBP eCLIP24.73■■□□□ 1.556e-7■■■□□ 16.3
SH3D19-211ENST00000604030 SOGA3Q5TF21 947 aa24.73■■□□□ 1.55
SH3D19-211ENST00000604030 HMGXB3Q12766 1538 aa24.73■■□□□ 1.55
SH3D19-211ENST00000604030 HMGB1P09429 215 aaKnown RBP24.73■■□□□ 1.55
SH3D19-211ENST00000604030 MCM3P25205 808 aa24.73■■□□□ 1.55
SH3D19-211ENST00000604030 EPB41L2O43491 1005 aaKnown RBP24.73■■□□□ 1.55
SH3D19-211ENST00000604030 TMCO3Q6UWJ1 677 aa24.73■■□□□ 1.55
SH3D19-211ENST00000604030 NSD2O96028 1365 aa24.72■■□□□ 1.55
SH3D19-211ENST00000604030 EPRSP07814 1512 aaKnown RBP24.72■■□□□ 1.55
SH3D19-211ENST00000604030 PTPN14Q15678 1187 aa24.72■■□□□ 1.55
SH3D19-211ENST00000604030 CAVIN2O95810 425 aa24.72■■□□□ 1.55
SH3D19-211ENST00000604030 FILIP1Q7Z7B0 1213 aa24.72■■□□□ 1.55
SH3D19-211ENST00000604030 U3KPZ7 1027 aaPredicted RBP24.72■■□□□ 1.55
SH3D19-211ENST00000604030 IMMTQ16891 758 aaKnown RBP24.71■■□□□ 1.55
SH3D19-211ENST00000604030 CCDC148Q8NFR7 591 aa24.71■■□□□ 1.55
SH3D19-211ENST00000604030 KIF18AQ8NI77 898 aa24.71■■□□□ 1.55
SH3D19-211ENST00000604030 CASTP20810 708 aaKnown RBP24.71■■□□□ 1.55
SH3D19-211ENST00000604030 CABP4P57796 275 aa24.71■■□□□ 1.55
SH3D19-211ENST00000604030 IKQ13123 557 aaPredicted RBP24.71■■□□□ 1.55
SH3D19-211ENST00000604030 ARHGAP29Q52LW3 1261 aa24.7■■□□□ 1.55
SH3D19-211ENST00000604030 MRC2Q9UBG0 1479 aa24.7■■□□□ 1.54
SH3D19-211ENST00000604030 THEMISQ8N1K5 641 aaPredicted RBP24.7■■□□□ 1.54
SH3D19-211ENST00000604030 BCL11BQ9C0K0 894 aaPredicted RBP24.7■■□□□ 1.54
SH3D19-211ENST00000604030 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
SH3D19-211ENST00000604030 UBAC1Q9BSL1 405 aa24.69■■□□□ 1.54
SH3D19-211ENST00000604030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.69■■□□□ 1.54
SH3D19-211ENST00000604030 UVSSAQ2YD98 709 aa24.69■■□□□ 1.54
SH3D19-211ENST00000604030 DDX19AQ9NUU7 478 aaKnown RBP24.69■■□□□ 1.54
SH3D19-211ENST00000604030 ESCO1Q5FWF5 840 aa24.69■■□□□ 1.54
SH3D19-211ENST00000604030 SIL1Q9H173 461 aa24.69■■□□□ 1.54
SH3D19-211ENST00000604030 CGNQ9P2M7 1197 aaKnown RBP24.69■■□□□ 1.54
SH3D19-211ENST00000604030 MAP9Q49MG5 647 aa24.68■■□□□ 1.54
SH3D19-211ENST00000604030 GNAT3A8MTJ3 354 aa24.68■■□□□ 1.54
SH3D19-211ENST00000604030 BMP2KLQ5H9B9 411 aa24.68■■□□□ 1.54
SH3D19-211ENST00000604030 TBC1D2Q9BYX2 928 aa24.68■■□□□ 1.54
SH3D19-211ENST00000604030 SSH1Q8WYL5 1049 aa24.68■■□□□ 1.54
SH3D19-211ENST00000604030 PHAXQ9H814 394 aaKnown RBP24.67■■□□□ 1.54
SH3D19-211ENST00000604030 CFAP100Q494V2 611 aa24.67■■□□□ 1.54
SH3D19-211ENST00000604030 PDCL3Q9H2J4 239 aa24.66■■□□□ 1.54
SH3D19-211ENST00000604030 GSDMDP57764 484 aa24.66■■□□□ 1.54
SH3D19-211ENST00000604030 ZNF397Q8NF99 534 aaPredicted RBP24.66■■□□□ 1.54
SH3D19-211ENST00000604030 IL1RAPL2Q9NP60 686 aa24.66■■□□□ 1.54
SH3D19-211ENST00000604030 PTPRCP08575 1304 aa24.66■■□□□ 1.54
SH3D19-211ENST00000604030 LIMCH1Q9UPQ0 1083 aa24.66■■□□□ 1.54
SH3D19-211ENST00000604030 CCDC61Q9Y6R9 512 aa24.66■■□□□ 1.54
SH3D19-211ENST00000604030 MAP4K4O95819 1239 aaPredicted RBP24.65■■□□□ 1.54
SH3D19-211ENST00000604030 AKAP2Q9Y2D5 859 aa24.65■■□□□ 1.54
SH3D19-211ENST00000604030 BTBD11A6QL63 1104 aa24.65■■□□□ 1.54
SH3D19-211ENST00000604030 TAF4BQ92750 862 aa24.65■■□□□ 1.54
SH3D19-211ENST00000604030 TANGO6Q9C0B7 1094 aa24.65■■□□□ 1.54
SH3D19-211ENST00000604030 IL16Q14005 1332 aa24.65■■□□□ 1.54
SH3D19-211ENST00000604030 TNPO1Q92973 898 aaKnown RBP24.64■■□□□ 1.54
SH3D19-211ENST00000604030 MPHOSPH8Q99549 860 aa24.64■■□□□ 1.54
SH3D19-211ENST00000604030 KIAA0586Q9BVV6 1533 aa24.64■■□□□ 1.54
SH3D19-211ENST00000604030 CCDC196A0A1B0GTZ2 297 aa24.64■■□□□ 1.54
SH3D19-211ENST00000604030 KDM4AO75164 1064 aa24.64■■□□□ 1.54
SH3D19-211ENST00000604030 DUSP27Q5VZP5 1158 aa24.64■■□□□ 1.53
SH3D19-211ENST00000604030 PTPN23Q9H3S7 1636 aa24.64■■□□□ 1.53
SH3D19-211ENST00000604030 POTEB2H3BUK9 544 aa24.63■■□□□ 1.53
SH3D19-211ENST00000604030 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
SH3D19-211ENST00000604030 NUP133Q8WUM0 1156 aa24.63■■□□□ 1.53
SH3D19-211ENST00000604030 RBM42Q9BTD8 480 aaKnown RBP24.63■■□□□ 1.53
SH3D19-211ENST00000604030 MTMR7Q9Y216 660 aa24.63■■□□□ 1.53
SH3D19-211ENST00000604030 CCDC83Q8IWF9 413 aa24.63■■□□□ 1.53
SH3D19-211ENST00000604030 CRACR2AQ9BSW2 395 aa24.63■■□□□ 1.53
SH3D19-211ENST00000604030 SEPT7Q16181 437 aaKnown RBP24.62■■□□□ 1.53
SH3D19-211ENST00000604030 KIAA1328Q86T90 577 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms