RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 PTGER2P43116 358 aa4.34□□□□□ -1.71
VCAM1-205ENST00000603679 TRAIPQ9BWF2 469 aa4.34□□□□□ -1.71
VCAM1-205ENST00000603679 CDCA7Q9BWT1 371 aaPredicted RBP4.34□□□□□ -1.71
VCAM1-205ENST00000603679 USP21Q9UK80 565 aa4.34□□□□□ -1.71
VCAM1-205ENST00000603679 ANKRD36CQ5JPF3 1778 aa4.34□□□□□ -1.71
VCAM1-205ENST00000603679 NUBP1P53384 320 aa4.33□□□□□ -1.72
VCAM1-205ENST00000603679 JMYQ8N9B5 988 aa4.33□□□□□ -1.72
VCAM1-205ENST00000603679 ARID3AQ99856 593 aa4.33□□□□□ -1.72
VCAM1-205ENST00000603679 RTL1A6NKG5 1358 aa4.33□□□□□ -1.72
VCAM1-205ENST00000603679 STK24Q9Y6E0 443 aa4.33□□□□□ -1.72
VCAM1-205ENST00000603679 CCDC7Q96M83 1385 aa4.33□□□□□ -1.72
VCAM1-205ENST00000603679 USP6P35125 1406 aa4.33□□□□□ -1.72
VCAM1-205ENST00000603679 HMGB1P09429 215 aaKnown RBP4.32□□□□□ -1.72
VCAM1-205ENST00000603679 C1orf115Q9H7X2 142 aa4.32□□□□□ -1.72
VCAM1-205ENST00000603679 COL11A2P13942 1736 aaPredicted RBP4.32□□□□□ -1.72
VCAM1-205ENST00000603679 DCAF8Q5TAQ9 597 aa4.32□□□□□ -1.72
VCAM1-205ENST00000603679 A6NJR5 290 aa4.31□□□□□ -1.72
VCAM1-205ENST00000603679 BCL11BQ9C0K0 894 aaPredicted RBP4.31□□□□□ -1.72
VCAM1-205ENST00000603679 ZNF609O15014 1411 aa4.31□□□□□ -1.72
VCAM1-205ENST00000603679 EP400Q96L91 3159 aa4.31□□□□□ -1.72
VCAM1-205ENST00000603679 PSME1Q06323 249 aa4.31□□□□□ -1.72
VCAM1-205ENST00000603679 E2F4Q16254 413 aa4.31□□□□□ -1.72
VCAM1-205ENST00000603679 FAM196AQ6ZSG2 479 aa4.31□□□□□ -1.72
VCAM1-205ENST00000603679 ARIH1Q9Y4X5 557 aaPredicted RBP4.31□□□□□ -1.72
VCAM1-205ENST00000603679 SLC16A10Q8TF71 515 aa4.3□□□□□ -1.72
VCAM1-205ENST00000603679 ECM29Q5VYK3 1845 aa4.3□□□□□ -1.72
VCAM1-205ENST00000603679 MAP3K19Q56UN5 1328 aa4.3□□□□□ -1.72
VCAM1-205ENST00000603679 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.3□□□□□ -1.72
VCAM1-205ENST00000603679 APBB1O00213 710 aa4.3□□□□□ -1.72
VCAM1-205ENST00000603679 KRT27Q7Z3Y8 459 aa4.3□□□□□ -1.72
VCAM1-205ENST00000603679 ZFP91Q96JP5 570 aaPredicted RBP4.3□□□□□ -1.72
VCAM1-205ENST00000603679 FAM212AQ96EL1 285 aa4.3□□□□□ -1.72
VCAM1-205ENST00000603679 KDM4CQ9H3R0 1056 aa4.3□□□□□ -1.72
VCAM1-205ENST00000603679 A0A1B0GUL6 1792 aa4.29□□□□□ -1.72
VCAM1-205ENST00000603679 PLEKHH1Q9ULM0 1364 aa4.29□□□□□ -1.72
VCAM1-205ENST00000603679 RIC1Q4ADV7 1423 aa4.29□□□□□ -1.72
VCAM1-205ENST00000603679 IL27Q8NEV9 243 aa4.29□□□□□ -1.72
VCAM1-205ENST00000603679 KCNQ2O43526 872 aa4.29□□□□□ -1.72
VCAM1-205ENST00000603679 BAG6P46379 1132 aa4.29□□□□□ -1.72
VCAM1-205ENST00000603679 NECTIN2Q92692 538 aa4.29□□□□□ -1.72
VCAM1-205ENST00000603679 RAB3GAP2Q9H2M9 1393 aa4.29□□□□□ -1.72
VCAM1-205ENST00000603679 COL3A1P02461 1466 aaPredicted RBP4.29□□□□□ -1.72
VCAM1-205ENST00000603679 ARAP2Q8WZ64 1704 aa4.29□□□□□ -1.72
VCAM1-205ENST00000603679 AKT1S1Q96B36 256 aa4.28□□□□□ -1.72
VCAM1-205ENST00000603679 CCDC88AQ3V6T2 1871 aa4.28□□□□□ -1.72
VCAM1-205ENST00000603679 ARID3CA6NKF2 412 aa4.28□□□□□ -1.72
VCAM1-205ENST00000603679 CLSPNQ9HAW4 1339 aa4.28□□□□□ -1.72
VCAM1-205ENST00000603679 KDRP35968 1356 aa4.28□□□□□ -1.72
VCAM1-205ENST00000603679 PPIP5K1Q6PFW1 1433 aa4.28□□□□□ -1.72
VCAM1-205ENST00000603679 COL4A1P02462 1669 aa4.28□□□□□ -1.72
VCAM1-205ENST00000603679 RGS19P49795 217 aa4.28□□□□□ -1.72
VCAM1-205ENST00000603679 ATP10DQ9P241 1426 aa4.27□□□□□ -1.73
VCAM1-205ENST00000603679 SEPT12Q8IYM1 358 aa4.27□□□□□ -1.73
VCAM1-205ENST00000603679 SEMA3EO15041 775 aa4.27□□□□□ -1.73
VCAM1-205ENST00000603679 PDE4CQ08493 712 aa4.27□□□□□ -1.73
VCAM1-205ENST00000603679 SLC26A8Q96RN1 970 aa4.27□□□□□ -1.73
VCAM1-205ENST00000603679 SNED1Q8TER0 1413 aa4.27□□□□□ -1.73
VCAM1-205ENST00000603679 PRR36Q9H6K5 1346 aa4.27□□□□□ -1.73
VCAM1-205ENST00000603679 GOPCQ9HD26 462 aa4.27□□□□□ -1.73
VCAM1-205ENST00000603679 TTC21AQ8NDW8 1320 aa4.26□□□□□ -1.73
VCAM1-205ENST00000603679 LOC105371045A0A1W2PR82 267 aa4.26□□□□□ -1.73
VCAM1-205ENST00000603679 PATL2C9JE40 543 aaKnown RBP4.26□□□□□ -1.73
VCAM1-205ENST00000603679 MKRN3Q13064 507 aaKnown RBP4.26□□□□□ -1.73
VCAM1-205ENST00000603679 RGS22Q8NE09 1264 aa4.26□□□□□ -1.73
VCAM1-205ENST00000603679 TRAK2O60296 914 aa4.26□□□□□ -1.73
VCAM1-205ENST00000603679 FAM83GA6ND36 823 aa4.26□□□□□ -1.73
VCAM1-205ENST00000603679 KRI1Q8N9T8 703 aaKnown RBP4.26□□□□□ -1.73
VCAM1-205ENST00000603679 DDRGK1Q96HY6 314 aa4.26□□□□□ -1.73
VCAM1-205ENST00000603679 TRIM66O15016 1216 aa4.25□□□□□ -1.73
VCAM1-205ENST00000603679 C1QTNF8P60827 252 aa4.25□□□□□ -1.73
VCAM1-205ENST00000603679 SLC27A3Q5K4L6 730 aa4.25□□□□□ -1.73
VCAM1-205ENST00000603679 CGNL1Q0VF96 1302 aa4.25□□□□□ -1.73
VCAM1-205ENST00000603679 DLG5Q8TDM6 1919 aa4.25□□□□□ -1.73
VCAM1-205ENST00000603679 PDE4DQ08499 809 aa4.25□□□□□ -1.73
VCAM1-205ENST00000603679 DNAJC5GQ8N7S2 189 aa4.25□□□□□ -1.73
VCAM1-205ENST00000603679 RBM33Q96EV2 1170 aaKnown RBP4.25□□□□□ -1.73
VCAM1-205ENST00000603679 ZNF777Q9ULD5 760 aaPredicted RBP4.25□□□□□ -1.73
VCAM1-205ENST00000603679 SPINK5Q9NQ38 1064 aaPredicted RBP4.25□□□□□ -1.73
VCAM1-205ENST00000603679 ANKRD36BQ8N2N9 1353 aa4.25□□□□□ -1.73
VCAM1-205ENST00000603679 A0A0U1RQG5 324 aaPredicted RBP4.24□□□□□ -1.73
VCAM1-205ENST00000603679 CAPN15O75808 1086 aa4.24□□□□□ -1.73
VCAM1-205ENST00000603679 GPBP1L1Q9HC44 474 aaPredicted RBP4.24□□□□□ -1.73
VCAM1-205ENST00000603679 SERPINA10Q9UK55 444 aa4.24□□□□□ -1.73
VCAM1-205ENST00000603679 TONSLQ96HA7 1378 aa4.24□□□□□ -1.73
VCAM1-205ENST00000603679 EDC4Q6P2E9 1401 aaKnown RBP4.24□□□□□ -1.73
VCAM1-205ENST00000603679 MEGF6O75095 1541 aa4.24□□□□□ -1.73
VCAM1-205ENST00000603679 MEX3CQ5U5Q3 659 aaKnown RBP4.24□□□□□ -1.73
VCAM1-205ENST00000603679 BCL11AQ9H165 835 aa4.24□□□□□ -1.73
VCAM1-205ENST00000603679 ORAI2Q96SN7 254 aa4.24□□□□□ -1.73
VCAM1-205ENST00000603679 MTFR1LQ9H019 292 aa4.24□□□□□ -1.73
VCAM1-205ENST00000603679 RAD21O60216 631 aa4.23□□□□□ -1.73
VCAM1-205ENST00000603679 RRP7BPQ9NSQ0 103 aa4.23□□□□□ -1.73
VCAM1-205ENST00000603679 PHF8Q9UPP1 1060 aa4.23□□□□□ -1.73
VCAM1-205ENST00000603679 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
VCAM1-205ENST00000603679 WDR17Q8IZU2 1322 aa4.23□□□□□ -1.73
VCAM1-205ENST00000603679 ZNF316A6NFI3 1004 aaPredicted RBP4.23□□□□□ -1.73
VCAM1-205ENST00000603679 GPIHBP1Q8IV16 184 aa4.23□□□□□ -1.73
VCAM1-205ENST00000603679 CCDC82Q8N4S0 544 aa4.23□□□□□ -1.73
VCAM1-205ENST00000603679 MYT1LQ9UL68 1186 aa4.23□□□□□ -1.73
VCAM1-205ENST00000603679 CARD10Q9BWT7 1032 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms