RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 NOD1Q9Y239 953 aa9.4□□□□□ -0.9
UBE2E3-212ENST00000602888 CBLBQ13191 982 aa9.39□□□□□ -0.91
UBE2E3-212ENST00000602888 ADD1P35611 737 aaKnown RBP9.38□□□□□ -0.91
UBE2E3-212ENST00000602888 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
UBE2E3-212ENST00000602888 Q6ZVU0 165 aa9.38□□□□□ -0.91
UBE2E3-212ENST00000602888 CYP2U1Q7Z449 544 aa9.38□□□□□ -0.91
UBE2E3-212ENST00000602888 TRIM50Q86XT4 487 aa9.38□□□□□ -0.91
UBE2E3-212ENST00000602888 CRIPAKQ8N1N5 446 aa9.38□□□□□ -0.91
UBE2E3-212ENST00000602888 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
UBE2E3-212ENST00000602888 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
UBE2E3-212ENST00000602888 ATP5J2-PTCD1G3V325 749 aa9.37□□□□□ -0.91
UBE2E3-212ENST00000602888 AXIN1O15169 862 aa9.37□□□□□ -0.91
UBE2E3-212ENST00000602888 ADH1AP07327 375 aa9.37□□□□□ -0.91
UBE2E3-212ENST00000602888 OSBPL3Q9H4L5 887 aa9.37□□□□□ -0.91
UBE2E3-212ENST00000602888 GTF2IP78347 998 aa9.36□□□□□ -0.91
UBE2E3-212ENST00000602888 KANK4Q5T7N3 995 aaPredicted RBP9.36□□□□□ -0.91
UBE2E3-212ENST00000602888 VRTNQ9H8Y1 702 aa9.36□□□□□ -0.91
UBE2E3-212ENST00000602888 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.35□□□□□ -0.91
UBE2E3-212ENST00000602888 ATP1A2P50993 1020 aa9.35□□□□□ -0.91
UBE2E3-212ENST00000602888 PBXIP1Q96AQ6 731 aa9.35□□□□□ -0.91
UBE2E3-212ENST00000602888 ST8SIA5O15466 376 aa9.34□□□□□ -0.91
UBE2E3-212ENST00000602888 UPP2O95045 317 aa9.34□□□□□ -0.91
UBE2E3-212ENST00000602888 PSME1Q06323 249 aa9.34□□□□□ -0.91
UBE2E3-212ENST00000602888 Q6ZNB5 142 aa9.34□□□□□ -0.91
UBE2E3-212ENST00000602888 AGBL1Q96MI9 1066 aa9.34□□□□□ -0.91
UBE2E3-212ENST00000602888 RASA1P20936 1047 aa9.33□□□□□ -0.92
UBE2E3-212ENST00000602888 CLDN10P78369 228 aa9.33□□□□□ -0.92
UBE2E3-212ENST00000602888 RELBQ01201 579 aa9.33□□□□□ -0.92
UBE2E3-212ENST00000602888 OGFOD1Q8N543 542 aa9.33□□□□□ -0.92
UBE2E3-212ENST00000602888 TSEN34Q9BSV6 310 aaKnown RBP9.33□□□□□ -0.92
UBE2E3-212ENST00000602888 AAASQ9NRG9 546 aa9.33□□□□□ -0.92
UBE2E3-212ENST00000602888 DNAAF2Q9NVR5 837 aaKnown RBP9.33□□□□□ -0.92
UBE2E3-212ENST00000602888 PCDHGA11Q9Y5H2 935 aa9.33□□□□□ -0.92
UBE2E3-212ENST00000602888 GNRH1P01148 92 aa9.32□□□□□ -0.92
UBE2E3-212ENST00000602888 PTGIRP43119 386 aa9.32□□□□□ -0.92
UBE2E3-212ENST00000602888 SRPK2P78362 688 aaKnown RBP9.32□□□□□ -0.92
UBE2E3-212ENST00000602888 CDCA8Q53HL2 280 aa9.32□□□□□ -0.92
UBE2E3-212ENST00000602888 MRPL14Q6P1L8 145 aaKnown RBP9.32□□□□□ -0.92
UBE2E3-212ENST00000602888 LARP1Q6PKG0 1096 aaKnown RBP9.32□□□□□ -0.92
UBE2E3-212ENST00000602888 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
UBE2E3-212ENST00000602888 FAM196BA6NMK8 535 aa9.31□□□□□ -0.92
UBE2E3-212ENST00000602888 PPP1R15AO75807 674 aaPredicted RBP9.31□□□□□ -0.92
UBE2E3-212ENST00000602888 BMP1P13497 986 aa9.31□□□□□ -0.92
UBE2E3-212ENST00000602888 LARGE2Q8N3Y3 721 aa9.31□□□□□ -0.92
UBE2E3-212ENST00000602888 KDF1Q8NAX2 398 aaPredicted RBP9.31□□□□□ -0.92
UBE2E3-212ENST00000602888 ZNF594Q96JF6 807 aaPredicted RBP9.31□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L15C9J2P7 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L10C9JJH3 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L13C9JLJ4 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L12C9JPN9 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L11C9JVI0 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L21D6R901 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L18D6R9N7 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L22D6RA61 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L17D6RBQ6 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L19D6RCP7 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L20D6RJB6 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 USP17L24Q0WX57 530 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 SCARF1Q14162 830 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 CRTC2Q53ET0 693 aaPredicted RBP9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 ARHGEF10LQ9HCE6 1279 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 KIAA1024Q9UPX6 916 aa9.3□□□□□ -0.92
UBE2E3-212ENST00000602888 A0A1W2PRU2 124 aa9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 BMP2P12643 396 aa9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 PTK7Q13308 1070 aa9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 ESCO1Q5FWF5 840 aa9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 TRIM46Q7Z4K8 759 aa9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 SIX5Q8N196 739 aa9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 TPCN2Q8NHX9 752 aa9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 ZNF395Q9H8N7 513 aaPredicted RBP9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 RAB6BQ9NRW1 208 aa9.29□□□□□ -0.92
UBE2E3-212ENST00000602888 ZBTB7BO15156 539 aaPredicted RBP9.28□□□□□ -0.92
UBE2E3-212ENST00000602888 ATG7O95352 703 aa9.28□□□□□ -0.92
UBE2E3-212ENST00000602888 SCNN1DP51172 638 aa9.28□□□□□ -0.92
UBE2E3-212ENST00000602888 GDF10P55107 478 aa9.28□□□□□ -0.92
UBE2E3-212ENST00000602888 CCDC102BQ68D86 513 aa9.28□□□□□ -0.92
UBE2E3-212ENST00000602888 PURBQ96QR8 312 aaKnown RBP9.28□□□□□ -0.92
UBE2E3-212ENST00000602888 ETNK1Q9HBU6 452 aa9.28□□□□□ -0.92
UBE2E3-212ENST00000602888 ATP13A2Q9NQ11 1180 aa9.28□□□□□ -0.92
UBE2E3-212ENST00000602888 RBM19Q9Y4C8 960 aaKnown RBP9.28□□□□□ -0.92
UBE2E3-212ENST00000602888 MEN1O00255 615 aa9.27□□□□□ -0.93
UBE2E3-212ENST00000602888 WASLO00401 505 aaPredicted RBP9.27□□□□□ -0.93
UBE2E3-212ENST00000602888 SPINT1O43278 529 aa9.27□□□□□ -0.93
UBE2E3-212ENST00000602888 STAU1O95793 577 aaKnown RBP9.27□□□□□ -0.93
UBE2E3-212ENST00000602888 CLN3Q13286 438 aa9.27□□□□□ -0.93
UBE2E3-212ENST00000602888 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
UBE2E3-212ENST00000602888 INHAP05111 366 aa9.26□□□□□ -0.93
UBE2E3-212ENST00000602888 ANKMY2Q8IV38 441 aa9.26□□□□□ -0.93
UBE2E3-212ENST00000602888 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
UBE2E3-212ENST00000602888 INSM2Q96T92 566 aaPredicted RBP9.26□□□□□ -0.93
UBE2E3-212ENST00000602888 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
UBE2E3-212ENST00000602888 ACIN1Q9UKV3 1341 aaKnown RBP9.26□□□□□ -0.93
UBE2E3-212ENST00000602888 LCE2BO14633 110 aa9.25□□□□□ -0.93
UBE2E3-212ENST00000602888 IL2RAP01589 272 aa9.25□□□□□ -0.93
UBE2E3-212ENST00000602888 DPYDQ12882 1025 aa9.25□□□□□ -0.93
UBE2E3-212ENST00000602888 ELOAQ14241 798 aaKnown RBP9.25□□□□□ -0.93
UBE2E3-212ENST00000602888 CNKSR1Q969H4 720 aa9.25□□□□□ -0.93
UBE2E3-212ENST00000602888 XAGE2Q96GT9 111 aa9.25□□□□□ -0.93
UBE2E3-212ENST00000602888 ZFP42Q96MM3 310 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms