RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 AMER1Q5JTC6 1135 aaPredicted RBP29.89■■■□□ 2.38
PPFIA3-208ENST00000602726 RREB1Q92766 1687 aa29.87■■■□□ 2.37
PPFIA3-208ENST00000602726 R3HDM1Q15032 1099 aaKnown RBP29.86■■■□□ 2.37
PPFIA3-208ENST00000602726 NBPF14Q5TI25 921 aa29.86■■■□□ 2.37
PPFIA3-208ENST00000602726 NHSQ6T4R5 1651 aa29.85■■■□□ 2.37
PPFIA3-208ENST00000602726 SRCAPQ6ZRS2 3230 aa29.84■■■□□ 2.37
PPFIA3-208ENST00000602726 PER1O15534 1290 aaPredicted RBP29.84■■■□□ 2.37
PPFIA3-208ENST00000602726 EYA1Q99502 592 aa29.84■■■□□ 2.37
PPFIA3-208ENST00000602726 RGPD3A6NKT7 1758 aaPredicted RBP29.84■■■□□ 2.37
PPFIA3-208ENST00000602726 RGPD4Q7Z3J3 1758 aa29.84■■■□□ 2.37
PPFIA3-208ENST00000602726 EIF4A2Q14240 407 aaKnown RBP29.83■■■□□ 2.37
PPFIA3-208ENST00000602726 NUP188Q5SRE5 1749 aa29.82■■■□□ 2.36
PPFIA3-208ENST00000602726 NCAPD2Q15021 1401 aa29.79■■■□□ 2.36
PPFIA3-208ENST00000602726 SHANK3Q9BYB0 1731 aa29.79■■■□□ 2.36
PPFIA3-208ENST00000602726 PCDH11XQ9BZA7 1347 aa29.78■■■□□ 2.36
PPFIA3-208ENST00000602726 PCDH11YQ9BZA8 1340 aa29.78■■■□□ 2.36
PPFIA3-208ENST00000602726 CC2D1BQ5T0F9 858 aaKnown RBP29.78■■■□□ 2.36
PPFIA3-208ENST00000602726 PROM2Q8N271 834 aa29.78■■■□□ 2.36
PPFIA3-208ENST00000602726 SYTL4Q96C24 671 aaPredicted RBP29.78■■■□□ 2.36
PPFIA3-208ENST00000602726 TXNRD1Q16881 649 aa29.77■■■□□ 2.36
PPFIA3-208ENST00000602726 PRIM1P49642 420 aaKnown RBP29.76■■■□□ 2.35
PPFIA3-208ENST00000602726 BTAF1O14981 1849 aa29.75■■■□□ 2.35
PPFIA3-208ENST00000602726 SPG7Q9UQ90 795 aa29.74■■■□□ 2.35
PPFIA3-208ENST00000602726 CNGB1Q14028 1251 aaPredicted RBP29.73■■■□□ 2.35
PPFIA3-208ENST00000602726 DOT1LQ8TEK3 1739 aa29.72■■■□□ 2.35
PPFIA3-208ENST00000602726 IGSF1Q8N6C5 1336 aa29.71■■■□□ 2.35
PPFIA3-208ENST00000602726 CYP27B1O15528 508 aa29.71■■■□□ 2.35
PPFIA3-208ENST00000602726 NPC1L1Q9UHC9 1359 aa29.71■■■□□ 2.35
PPFIA3-208ENST00000602726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.7■■■□□ 2.35
PPFIA3-208ENST00000602726 PKD1L3Q7Z443 1732 aa29.69■■■□□ 2.34
PPFIA3-208ENST00000602726 MTHFSP49914 203 aa29.69■■■□□ 2.34
PPFIA3-208ENST00000602726 ANO8Q9HCE9 1232 aaPredicted RBP29.68■■■□□ 2.34
PPFIA3-208ENST00000602726 STK32BQ9NY57 414 aa29.66■■■□□ 2.34
PPFIA3-208ENST00000602726 IL13P35225 146 aa29.65■■■□□ 2.34
PPFIA3-208ENST00000602726 PLEKHG2Q9H7P9 1386 aa29.63■■■□□ 2.33
PPFIA3-208ENST00000602726 NKX1-1Q15270 411 aaPredicted RBP29.62■■■□□ 2.33
PPFIA3-208ENST00000602726 SLC27A3Q5K4L6 730 aa29.62■■■□□ 2.33
PPFIA3-208ENST00000602726 IFNL2Q8IZJ0 200 aa29.62■■■□□ 2.33
PPFIA3-208ENST00000602726 LRP5O75197 1615 aa29.62■■■□□ 2.33
PPFIA3-208ENST00000602726 SULT6B1Q6IMI4 303 aa29.61■■■□□ 2.33
PPFIA3-208ENST00000602726 AEBP1Q8IUX7 1158 aa29.61■■■□□ 2.33
PPFIA3-208ENST00000602726 PHKG2P15735 406 aa29.6■■■□□ 2.33
PPFIA3-208ENST00000602726 SLC15A2Q16348 729 aa29.6■■■□□ 2.33
PPFIA3-208ENST00000602726 PLEKHO1Q53GL0 409 aaPredicted RBP29.6■■■□□ 2.33
PPFIA3-208ENST00000602726 MPRIPQ6WCQ1 1025 aa29.6■■■□□ 2.33
PPFIA3-208ENST00000602726 LRRC4BQ9NT99 713 aa29.6■■■□□ 2.33
PPFIA3-208ENST00000602726 AMOTQ4VCS5 1084 aa29.57■■■□□ 2.32
PPFIA3-208ENST00000602726 DIAPH1O60610 1272 aaKnown RBP29.56■■■□□ 2.32
PPFIA3-208ENST00000602726 TOGARAM1Q9Y4F4 1720 aa29.54■■■□□ 2.32
PPFIA3-208ENST00000602726 KDRP35968 1356 aa29.54■■■□□ 2.32
PPFIA3-208ENST00000602726 KCNQ4P56696 695 aa29.54■■■□□ 2.32
PPFIA3-208ENST00000602726 ZNF530Q6P9A1 599 aaPredicted RBP29.54■■■□□ 2.32
PPFIA3-208ENST00000602726 CCNL1Q9UK58 526 aaPredicted RBP29.54■■■□□ 2.32
PPFIA3-208ENST00000602726 PIGBQ92521 554 aa29.53■■■□□ 2.32
PPFIA3-208ENST00000602726 PAPPAQ13219 1627 aa29.53■■■□□ 2.32
PPFIA3-208ENST00000602726 ITGB4P16144 1822 aa29.52■■■□□ 2.32
PPFIA3-208ENST00000602726 LY75O60449 1722 aa29.52■■■□□ 2.32
PPFIA3-208ENST00000602726 HSP90AB1P08238 724 aaKnown RBP29.52■■■□□ 2.32
PPFIA3-208ENST00000602726 SPON1Q9HCB6 807 aa29.52■■■□□ 2.32
PPFIA3-208ENST00000602726 SMARCC1Q92922 1105 aaPredicted RBP29.51■■■□□ 2.31
PPFIA3-208ENST00000602726 PDGFDQ9GZP0 370 aaPredicted RBP29.51■■■□□ 2.31
PPFIA3-208ENST00000602726 TMOD3Q9NYL9 352 aa29.51■■■□□ 2.31
PPFIA3-208ENST00000602726 HMOX1P09601 288 aa29.5■■■□□ 2.31
PPFIA3-208ENST00000602726 ZNF827Q17R98 1081 aa29.5■■■□□ 2.31
PPFIA3-208ENST00000602726 PALLDQ8WX93 1383 aa29.5■■■□□ 2.31
PPFIA3-208ENST00000602726 C1orf141Q5JVX7 400 aa29.49■■■□□ 2.31
PPFIA3-208ENST00000602726 AKT1S1Q96B36 256 aa29.48■■■□□ 2.31
PPFIA3-208ENST00000602726 DCAF5Q96JK2 942 aa29.48■■■□□ 2.31
PPFIA3-208ENST00000602726 CASZ1Q86V15 1759 aa29.48■■■□□ 2.31
PPFIA3-208ENST00000602726 CFAP53Q96M91 514 aa29.47■■■□□ 2.31
PPFIA3-208ENST00000602726 ZBTB7AO95365 584 aa29.46■■■□□ 2.31
PPFIA3-208ENST00000602726 COL3A1P02461 1466 aaPredicted RBP29.45■■■□□ 2.31
PPFIA3-208ENST00000602726 ERVV-2B6SEH9 535 aa29.45■■■□□ 2.31
PPFIA3-208ENST00000602726 U2SURPO15042 1029 aaKnown RBP29.45■■■□□ 2.31
PPFIA3-208ENST00000602726 HMGB2P26583 209 aaKnown RBP29.44■■■□□ 2.3
PPFIA3-208ENST00000602726 PPP2R1AP30153 589 aa29.44■■■□□ 2.3
PPFIA3-208ENST00000602726 TFCP2L1Q9NZI6 479 aa29.44■■■□□ 2.3
PPFIA3-208ENST00000602726 PPP1R1BQ9UD71 204 aaPredicted RBP29.43■■■□□ 2.3
PPFIA3-208ENST00000602726 ASAP1Q9ULH1 1129 aa29.41■■■□□ 2.3
PPFIA3-208ENST00000602726 ATF5Q9Y2D1 282 aaPredicted RBP29.41■■■□□ 2.3
PPFIA3-208ENST00000602726 CABP4P57796 275 aa29.4■■■□□ 2.3
PPFIA3-208ENST00000602726 KDM6AO15550 1401 aaPredicted RBP29.39■■■□□ 2.3
PPFIA3-208ENST00000602726 AKAP4Q5JQC9 854 aa29.39■■■□□ 2.3
PPFIA3-208ENST00000602726 MTFR1LQ9H019 292 aa29.39■■■□□ 2.3
PPFIA3-208ENST00000602726 ATG3Q9NT62 314 aa29.38■■■□□ 2.29
PPFIA3-208ENST00000602726 LOC102724428A0A0B4J2F2 783 aa29.37■■■□□ 2.29
PPFIA3-208ENST00000602726 ZEB1P37275 1124 aaPredicted RBP29.37■■■□□ 2.29
PPFIA3-208ENST00000602726 SIK1P57059 783 aa29.37■■■□□ 2.29
PPFIA3-208ENST00000602726 NUDCQ9Y266 331 aa29.37■■■□□ 2.29
PPFIA3-208ENST00000602726 PNPLA7Q6ZV29 1317 aa29.37■■■□□ 2.29
PPFIA3-208ENST00000602726 C5P01031 1676 aa29.35■■■□□ 2.29
PPFIA3-208ENST00000602726 MTHFSDQ2M296 383 aaKnown RBP29.35■■■□□ 2.29
PPFIA3-208ENST00000602726 QSER1Q2KHR3 1735 aa29.34■■■□□ 2.29
PPFIA3-208ENST00000602726 DDX10Q13206 875 aaKnown RBP29.34■■■□□ 2.29
PPFIA3-208ENST00000602726 PTGER2P43116 358 aa29.33■■■□□ 2.29
PPFIA3-208ENST00000602726 NFATC2IPQ8NCF5 419 aa29.33■■■□□ 2.29
PPFIA3-208ENST00000602726 SLC16A10Q8TF71 515 aa29.33■■■□□ 2.29
PPFIA3-208ENST00000602726 TAF1LQ8IZX4 1826 aa29.32■■■□□ 2.28
PPFIA3-208ENST00000602726 TUBGCP6Q96RT7 1819 aa29.31■■■□□ 2.28
PPFIA3-208ENST00000602726 MSH5O43196 834 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms