RNA–Protein interactions for RNA: ENST00000602670.1

SFXN2-209, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-209ENST00000602670 SYTL4Q96C24 671 aaPredicted RBP18.24■□□□□ 0.51
SFXN2-209ENST00000602670 FAM208AQ9UK61 1670 aaKnown RBP18.24■□□□□ 0.51
SFXN2-209ENST00000602670 MSL1Q68DK7 614 aa18.22■□□□□ 0.51
SFXN2-209ENST00000602670 CCNL1Q9UK58 526 aaPredicted RBP18.22■□□□□ 0.51
SFXN2-209ENST00000602670 MSH5O43196 834 aa18.21■□□□□ 0.51
SFXN2-209ENST00000602670 ZNF526Q8TF50 670 aaPredicted RBP18.21■□□□□ 0.51
SFXN2-209ENST00000602670 L3MBTL2Q969R5 705 aa18.2■□□□□ 0.5
SFXN2-209ENST00000602670 ROCK2O75116 1388 aaKnown RBP18.19■□□□□ 0.5
SFXN2-209ENST00000602670 CD2APQ9Y5K6 639 aa18.19■□□□□ 0.5
SFXN2-209ENST00000602670 IP6K1Q92551 441 aa18.18■□□□□ 0.5
SFXN2-209ENST00000602670 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
SFXN2-209ENST00000602670 C5P01031 1676 aa18.18■□□□□ 0.5
SFXN2-209ENST00000602670 EDC4Q6P2E9 1401 aaKnown RBP18.17■□□□□ 0.5
SFXN2-209ENST00000602670 MEGF6O75095 1541 aa18.17■□□□□ 0.5
SFXN2-209ENST00000602670 USP47Q96K76 1375 aa18.16■□□□□ 0.5
SFXN2-209ENST00000602670 RGPD2P0DJD1 1756 aa18.15■□□□□ 0.5
SFXN2-209ENST00000602670 KIF3CO14782 793 aa18.14■□□□□ 0.49
SFXN2-209ENST00000602670 ZCRB1Q8TBF4 217 aaKnown RBP18.14■□□□□ 0.49
SFXN2-209ENST00000602670 HDGFL2Q7Z4V5 671 aaPredicted RBP18.13■□□□□ 0.49
SFXN2-209ENST00000602670 TMC1Q8TDI8 760 aa18.13■□□□□ 0.49
SFXN2-209ENST00000602670 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
SFXN2-209ENST00000602670 TAF1LQ8IZX4 1826 aa18.13■□□□□ 0.49
SFXN2-209ENST00000602670 A0A1W2PP64 1363 aa18.13■□□□□ 0.49
SFXN2-209ENST00000602670 HOXC9P31274 260 aa18.11■□□□□ 0.49
SFXN2-209ENST00000602670 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
SFXN2-209ENST00000602670 IGSF1Q8N6C5 1336 aa18.11■□□□□ 0.49
SFXN2-209ENST00000602670 TOGARAM1Q9Y4F4 1720 aa18.11■□□□□ 0.49
SFXN2-209ENST00000602670 FLAD1Q8NFF5 587 aa18.1■□□□□ 0.49
SFXN2-209ENST00000602670 WWC3Q9ULE0 1092 aa18.1■□□□□ 0.49
SFXN2-209ENST00000602670 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
SFXN2-209ENST00000602670 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
SFXN2-209ENST00000602670 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
SFXN2-209ENST00000602670 AMIGO3Q86WK7 504 aa18.08■□□□□ 0.48
SFXN2-209ENST00000602670 TERF2IPQ9NYB0 399 aa18.08■□□□□ 0.48
SFXN2-209ENST00000602670 APLP1P51693 650 aa18.07■□□□□ 0.48
SFXN2-209ENST00000602670 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
SFXN2-209ENST00000602670 FBLN1P23142 703 aa18.06■□□□□ 0.48
SFXN2-209ENST00000602670 AMPHP49418 695 aa18.05■□□□□ 0.48
SFXN2-209ENST00000602670 NBPF6Q5VWK0 638 aa18.05■□□□□ 0.48
SFXN2-209ENST00000602670 DNAJC5GQ8N7S2 189 aa18.05■□□□□ 0.48
SFXN2-209ENST00000602670 NBPF4Q96M43 638 aa18.05■□□□□ 0.48
SFXN2-209ENST00000602670 SIN3AQ96ST3 1273 aa18.05■□□□□ 0.48
SFXN2-209ENST00000602670 CGNL1Q0VF96 1302 aa18.04■□□□□ 0.48
SFXN2-209ENST00000602670 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
SFXN2-209ENST00000602670 RTL1A6NKG5 1358 aa18.04■□□□□ 0.48
SFXN2-209ENST00000602670 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
SFXN2-209ENST00000602670 SMIM5Q71RC9 77 aa18.03■□□□□ 0.48
SFXN2-209ENST00000602670 COG3Q96JB2 828 aa18.03■□□□□ 0.48
SFXN2-209ENST00000602670 AK7Q96M32 723 aa18.03■□□□□ 0.48
SFXN2-209ENST00000602670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.02■□□□□ 0.48
SFXN2-209ENST00000602670 PHF14O94880 888 aa18.02■□□□□ 0.48
SFXN2-209ENST00000602670 ITGB4P16144 1822 aa18.01■□□□□ 0.47
SFXN2-209ENST00000602670 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
SFXN2-209ENST00000602670 RAPGEF4Q8WZA2 1011 aa18.01■□□□□ 0.47
SFXN2-209ENST00000602670 PCDH11XQ9BZA7 1347 aa18■□□□□ 0.47
SFXN2-209ENST00000602670 PCDH11YQ9BZA8 1340 aa18■□□□□ 0.47
SFXN2-209ENST00000602670 NSD3Q9BZ95 1437 aa18■□□□□ 0.47
SFXN2-209ENST00000602670 TOMM70O94826 608 aa18■□□□□ 0.47
SFXN2-209ENST00000602670 PUS7Q96PZ0 661 aaKnown RBP18■□□□□ 0.47
SFXN2-209ENST00000602670 KIAA1551Q9HCM1 1747 aa18■□□□□ 0.47
SFXN2-209ENST00000602670 WDR90Q96KV7 1748 aa17.99■□□□□ 0.47
SFXN2-209ENST00000602670 TATP17735 454 aaPredicted RBP17.99■□□□□ 0.47
SFXN2-209ENST00000602670 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
SFXN2-209ENST00000602670 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
SFXN2-209ENST00000602670 PXDNLA1KZ92 1463 aa17.99■□□□□ 0.47
SFXN2-209ENST00000602670 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
SFXN2-209ENST00000602670 CYP27B1O15528 508 aa17.98■□□□□ 0.47
SFXN2-209ENST00000602670 SSFA2P28290 1259 aa17.98■□□□□ 0.47
SFXN2-209ENST00000602670 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
SFXN2-209ENST00000602670 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
SFXN2-209ENST00000602670 SMARCC1Q92922 1105 aaPredicted RBP17.98■□□□□ 0.47
SFXN2-209ENST00000602670 PCNTO95613 3336 aa17.98■□□□□ 0.47
SFXN2-209ENST00000602670 SMG6Q86US8 1419 aaKnown RBP17.98■□□□□ 0.47
SFXN2-209ENST00000602670 LINC00116Q8NCU8 138 aa17.96■□□□□ 0.47
SFXN2-209ENST00000602670 NMRK2Q9NPI5 230 aa17.96■□□□□ 0.47
SFXN2-209ENST00000602670 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
SFXN2-209ENST00000602670 N4BP2Q86UW6 1770 aaPredicted RBP17.95■□□□□ 0.46
SFXN2-209ENST00000602670 PIGBQ92521 554 aa17.95■□□□□ 0.46
SFXN2-209ENST00000602670 COL13A1Q5TAT6 717 aaPredicted RBP17.94■□□□□ 0.46
SFXN2-209ENST00000602670 INSRP06213 1382 aa17.93■□□□□ 0.46
SFXN2-209ENST00000602670 LOC102724428A0A0B4J2F2 783 aa17.93■□□□□ 0.46
SFXN2-209ENST00000602670 MMP10P09238 476 aa17.93■□□□□ 0.46
SFXN2-209ENST00000602670 SIK1P57059 783 aa17.93■□□□□ 0.46
SFXN2-209ENST00000602670 HTRA3P83110 453 aa17.92■□□□□ 0.46
SFXN2-209ENST00000602670 HSP90AB2PQ58FF8 381 aa17.92■□□□□ 0.46
SFXN2-209ENST00000602670 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
SFXN2-209ENST00000602670 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
SFXN2-209ENST00000602670 GNPATO15228 680 aa17.91■□□□□ 0.46
SFXN2-209ENST00000602670 JMYQ8N9B5 988 aa17.91■□□□□ 0.46
SFXN2-209ENST00000602670 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
SFXN2-209ENST00000602670 KLRG1Q96E93 195 aa17.91■□□□□ 0.46
SFXN2-209ENST00000602670 BRCA1P38398 1863 aaKnown RBP17.9■□□□□ 0.46
SFXN2-209ENST00000602670 A0A0G2JLW4 131 aa17.9■□□□□ 0.46
SFXN2-209ENST00000602670 FYB1O15117 783 aa17.9■□□□□ 0.46
SFXN2-209ENST00000602670 TGFB2P61812 414 aa17.9■□□□□ 0.46
SFXN2-209ENST00000602670 ITPK1Q13572 414 aa17.9■□□□□ 0.46
SFXN2-209ENST00000602670 TESK2Q96S53 571 aa17.9■□□□□ 0.46
SFXN2-209ENST00000602670 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
SFXN2-209ENST00000602670 FLT4P35916 1363 aa17.9■□□□□ 0.46
SFXN2-209ENST00000602670 NKX1-1Q15270 411 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 329.6 ms