RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 ICE2Q659A1 982 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 ZNF397Q8NF99 534 aaPredicted RBP9.39□□□□□ -0.91
KDM1A-206ENST00000602503 FAM53CQ9NYF3 392 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 CWC15Q9P013 229 aaKnown RBP9.39□□□□□ -0.91
KDM1A-206ENST00000602503 ABCA6Q8N139 1617 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
KDM1A-206ENST00000602503 DSG3P32926 999 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 TEX35Q5T0J7 233 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 CERS3Q8IU89 383 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 CNPY4Q8N129 248 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 TXLNBQ8N3L3 684 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 NOP2P46087 812 aaKnown RBP9.38□□□□□ -0.91
KDM1A-206ENST00000602503 BRPF1P55201 1214 aaPredicted RBP9.38□□□□□ -0.91
KDM1A-206ENST00000602503 HDAC1Q13547 482 aaPredicted RBP9.38□□□□□ -0.91
KDM1A-206ENST00000602503 KIAA1524Q8TCG1 905 aa9.38□□□□□ -0.91
KDM1A-206ENST00000602503 KNSTRNQ9Y448 316 aa9.38□□□□□ -0.91
KDM1A-206ENST00000602503 SYCE3A1L190 88 aa9.38□□□□□ -0.91
KDM1A-206ENST00000602503 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
KDM1A-206ENST00000602503 SLFNL1Q499Z3 407 aa9.38□□□□□ -0.91
KDM1A-206ENST00000602503 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
KDM1A-206ENST00000602503 WWC1Q8IX03 1113 aa9.38□□□□□ -0.91
KDM1A-206ENST00000602503 RSPH14Q9UHP6 348 aa9.38□□□□□ -0.91
KDM1A-206ENST00000602503 PCDHB15Q9Y5E8 787 aa9.38□□□□□ -0.91
KDM1A-206ENST00000602503 ANKRD36BQ8N2N9 1353 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 MNS1Q8NEH6 495 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 SLC52A1Q9NWF4 448 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 CEP83Q9Y592 693 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 ADGRB3O60242 1522 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 ZC3H13Q5T200 1668 aaKnown RBP9.37□□□□□ -0.91
KDM1A-206ENST00000602503 KIF1CO43896 1103 aaKnown RBP9.37□□□□□ -0.91
KDM1A-206ENST00000602503 PRPF40AO75400 957 aaKnown RBP9.37□□□□□ -0.91
KDM1A-206ENST00000602503 RAD51AP2Q09MP3 1159 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 RABEP1Q15276 862 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 NOM1Q5C9Z4 860 aaKnown RBP9.37□□□□□ -0.91
KDM1A-206ENST00000602503 PANK1Q8TE04 598 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 USP25Q9UHP3 1055 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 KIDINS220Q9ULH0 1771 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
KDM1A-206ENST00000602503 DHX16O60231 1041 aaKnown RBP9.37□□□□□ -0.91
KDM1A-206ENST00000602503 GUCY2CP25092 1073 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 BANK1Q8NDB2 785 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 NOL10Q9BSC4 688 aaKnown RBP9.37□□□□□ -0.91
KDM1A-206ENST00000602503 CARD10Q9BWT7 1032 aa9.37□□□□□ -0.91
KDM1A-206ENST00000602503 ZNF518AQ6AHZ1 1483 aa9.36□□□□□ -0.91
KDM1A-206ENST00000602503 MCCP23508 829 aa9.36□□□□□ -0.91
KDM1A-206ENST00000602503 CASQ1P31415 396 aa9.36□□□□□ -0.91
KDM1A-206ENST00000602503 GPT2Q8TD30 523 aa9.36□□□□□ -0.91
KDM1A-206ENST00000602503 JARID2Q92833 1246 aaPredicted RBP9.36□□□□□ -0.91
KDM1A-206ENST00000602503 PUS7Q96PZ0 661 aaKnown RBP9.36□□□□□ -0.91
KDM1A-206ENST00000602503 CCDC172P0C7W6 258 aa9.36□□□□□ -0.91
KDM1A-206ENST00000602503 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
KDM1A-206ENST00000602503 HNRNPH2P55795 449 aaKnown RBP9.36□□□□□ -0.91
KDM1A-206ENST00000602503 GPS2Q13227 327 aa9.36□□□□□ -0.91
KDM1A-206ENST00000602503 BMS1Q14692 1282 aaKnown RBP9.36□□□□□ -0.91
KDM1A-206ENST00000602503 GAS2L2Q8NHY3 880 aa9.36□□□□□ -0.91
KDM1A-206ENST00000602503 TMEM63CQ9P1W3 806 aa9.36□□□□□ -0.91
KDM1A-206ENST00000602503 PPRC1Q5VV67 1664 aaKnown RBP9.35□□□□□ -0.91
KDM1A-206ENST00000602503 PPLO60437 1756 aa9.35□□□□□ -0.91
KDM1A-206ENST00000602503 BMP2KLQ5H9B9 411 aa9.35□□□□□ -0.91
KDM1A-206ENST00000602503 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
KDM1A-206ENST00000602503 LOC102724159A0A0B4J2E5 919 aa9.35□□□□□ -0.91
KDM1A-206ENST00000602503 PWP2Q15269 919 aaKnown RBP9.35□□□□□ -0.91
KDM1A-206ENST00000602503 CCDC112Q8NEF3 446 aa9.35□□□□□ -0.91
KDM1A-206ENST00000602503 REREQ9P2R6 1566 aa9.35□□□□□ -0.91
KDM1A-206ENST00000602503 ERICH4A6NGS2 130 aa9.34□□□□□ -0.91
KDM1A-206ENST00000602503 KIF1BPQ96EK5 621 aa9.34□□□□□ -0.91
KDM1A-206ENST00000602503 KIF2CQ99661 725 aa9.34□□□□□ -0.91
KDM1A-206ENST00000602503 ERVK-7P63135 1459 aa9.34□□□□□ -0.91
KDM1A-206ENST00000602503 HSP90AB3PQ58FF7 597 aa9.34□□□□□ -0.91
KDM1A-206ENST00000602503 V9GYY5 206 aaPredicted RBP9.34□□□□□ -0.91
KDM1A-206ENST00000602503 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
KDM1A-206ENST00000602503 MLH3Q9UHC1 1453 aa9.34□□□□□ -0.91
KDM1A-206ENST00000602503 MROH2AA6NES4 1674 aa9.33□□□□□ -0.92
KDM1A-206ENST00000602503 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
KDM1A-206ENST00000602503 ADCY5O95622 1261 aa9.33□□□□□ -0.92
KDM1A-206ENST00000602503 CALRP27797 417 aaKnown RBP9.33□□□□□ -0.92
KDM1A-206ENST00000602503 TPM4P67936 248 aa9.33□□□□□ -0.92
KDM1A-206ENST00000602503 SATB1Q01826 763 aa9.33□□□□□ -0.92
KDM1A-206ENST00000602503 RNF214Q8ND24 703 aa9.33□□□□□ -0.92
KDM1A-206ENST00000602503 KCNG1Q9UIX4 513 aa9.33□□□□□ -0.92
KDM1A-206ENST00000602503 ATAD2Q6PL18 1390 aa9.33□□□□□ -0.92
KDM1A-206ENST00000602503 FAM177BA6PVY3 158 aa9.33□□□□□ -0.92
KDM1A-206ENST00000602503 MVPQ14764 893 aaKnown RBP9.33□□□□□ -0.92
KDM1A-206ENST00000602503 RPAINQ86UA6 219 aa9.33□□□□□ -0.92
KDM1A-206ENST00000602503 TTC12Q9H892 705 aaPredicted RBP9.33□□□□□ -0.92
KDM1A-206ENST00000602503 RARSP54136 660 aaKnown RBP9.32□□□□□ -0.92
KDM1A-206ENST00000602503 NBPF20Q3BBV1 942 aa9.32□□□□□ -0.92
KDM1A-206ENST00000602503 CCDC91Q7Z6B0 441 aa9.32□□□□□ -0.92
KDM1A-206ENST00000602503 DEF6Q9H4E7 631 aa9.32□□□□□ -0.92
KDM1A-206ENST00000602503 POLR3AO14802 1390 aaPredicted RBP9.32□□□□□ -0.92
KDM1A-206ENST00000602503 HECW2Q9P2P5 1572 aa9.32□□□□□ -0.92
KDM1A-206ENST00000602503 DIP2BQ9P265 1576 aa9.32□□□□□ -0.92
KDM1A-206ENST00000602503 CT47B1P0C2W7 299 aaPredicted RBP9.32□□□□□ -0.92
KDM1A-206ENST00000602503 RBM28Q9NW13 759 aaKnown RBP9.32□□□□□ -0.92
KDM1A-206ENST00000602503 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.32□□□□□ -0.92
KDM1A-206ENST00000602503 RBM27Q9P2N5 1060 aaKnown RBP9.32□□□□□ -0.92
KDM1A-206ENST00000602503 A0A1B0GUL7 405 aa9.32□□□□□ -0.92
KDM1A-206ENST00000602503 KDM4AO75164 1064 aa9.32□□□□□ -0.92
KDM1A-206ENST00000602503 DONSONQ9NYP3 566 aa9.32□□□□□ -0.92
KDM1A-206ENST00000602503 UGGT1Q9NYU2 1555 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 236.6 ms