RNA–Protein interactions for RNA: ENST00000602495.1

XIST-208, X inactive specific transcript, humanhuman

TSL 4

Gene XIST, Length 827 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-208ENST00000602495 LTV1Q96GA3 475 aaPredicted RBP10.32□□□□□ -0.76
XIST-208ENST00000602495 COG3Q96JB2 828 aa10.32□□□□□ -0.76
XIST-208ENST00000602495 RGPD5Q99666 1765 aa10.31□□□□□ -0.76
XIST-208ENST00000602495 FYB1O15117 783 aa10.31□□□□□ -0.76
XIST-208ENST00000602495 PTGER2P43116 358 aa10.31□□□□□ -0.76
XIST-208ENST00000602495 DDX54Q8TDD1 881 aaKnown RBP10.31□□□□□ -0.76
XIST-208ENST00000602495 RREB1Q92766 1687 aa10.31□□□□□ -0.76
XIST-208ENST00000602495 SBF2Q86WG5 1849 aa10.3□□□□□ -0.76
XIST-208ENST00000602495 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
XIST-208ENST00000602495 HOXC9P31274 260 aa10.3□□□□□ -0.76
XIST-208ENST00000602495 AMPHP49418 695 aa10.3□□□□□ -0.76
XIST-208ENST00000602495 CLEC11AQ9Y240 323 aa10.3□□□□□ -0.76
XIST-208ENST00000602495 MAP3K19Q56UN5 1328 aa10.3□□□□□ -0.76
XIST-208ENST00000602495 LRRC37A3O60309 1634 aa10.29□□□□□ -0.76
XIST-208ENST00000602495 YY1P25490 414 aa10.29□□□□□ -0.76
XIST-208ENST00000602495 TMF1P82094 1093 aa10.29□□□□□ -0.76
XIST-208ENST00000602495 LRRC4BQ9NT99 713 aa10.29□□□□□ -0.76
XIST-208ENST00000602495 NINLQ9Y2I6 1382 aa10.28□□□□□ -0.76
XIST-208ENST00000602495 TNS2Q63HR2 1409 aa10.28□□□□□ -0.76
XIST-208ENST00000602495 PRIM1P49642 420 aaKnown RBP10.28□□□□□ -0.76
XIST-208ENST00000602495 ZCRB1Q8TBF4 217 aaKnown RBP10.28□□□□□ -0.76
XIST-208ENST00000602495 MTFR1LQ9H019 292 aa10.28□□□□□ -0.76
XIST-208ENST00000602495 GGNBP2Q9H3C7 697 aa10.28□□□□□ -0.76
XIST-208ENST00000602495 ABCC6O95255 1503 aa10.28□□□□□ -0.76
XIST-208ENST00000602495 MON2Q7Z3U7 1717 aa10.27□□□□□ -0.76
XIST-208ENST00000602495 NBPF6Q5VWK0 638 aa10.27□□□□□ -0.77
XIST-208ENST00000602495 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
XIST-208ENST00000602495 NBPF4Q96M43 638 aa10.27□□□□□ -0.77
XIST-208ENST00000602495 SGIP1Q9BQI5 828 aa10.27□□□□□ -0.77
XIST-208ENST00000602495 SYT17Q9BSW7 474 aa10.27□□□□□ -0.77
XIST-208ENST00000602495 FXR2P51116 673 aaKnown RBP eCLIP10.26□□□□□ -0.77
XIST-208ENST00000602495 RRS1Q15050 365 aaKnown RBP10.26□□□□□ -0.77
XIST-208ENST00000602495 SLC27A3Q5K4L6 730 aa10.26□□□□□ -0.77
XIST-208ENST00000602495 ZNF827Q17R98 1081 aa10.25□□□□□ -0.77
XIST-208ENST00000602495 CDCA8Q53HL2 280 aa10.25□□□□□ -0.77
XIST-208ENST00000602495 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
XIST-208ENST00000602495 SYTL4Q96C24 671 aaPredicted RBP10.25□□□□□ -0.77
XIST-208ENST00000602495 CARD14Q9BXL6 1004 aa10.25□□□□□ -0.77
XIST-208ENST00000602495 FHDC1Q9C0D6 1143 aaPredicted RBP10.25□□□□□ -0.77
XIST-208ENST00000602495 KAT6BQ8WYB5 2073 aa10.25□□□□□ -0.77
XIST-208ENST00000602495 ANKRD36BQ8N2N9 1353 aa10.25□□□□□ -0.77
XIST-208ENST00000602495 KCNQ4P56696 695 aa10.24□□□□□ -0.77
XIST-208ENST00000602495 HSP90AB2PQ58FF8 381 aa10.24□□□□□ -0.77
XIST-208ENST00000602495 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
XIST-208ENST00000602495 ARXQ96QS3 562 aa10.24□□□□□ -0.77
XIST-208ENST00000602495 TIMELESSQ9UNS1 1208 aa10.24□□□□□ -0.77
XIST-208ENST00000602495 USP54Q70EL1 1684 aa10.24□□□□□ -0.77
XIST-208ENST00000602495 RGPD3A6NKT7 1758 aaPredicted RBP10.24□□□□□ -0.77
XIST-208ENST00000602495 RGPD4Q7Z3J3 1758 aa10.24□□□□□ -0.77
XIST-208ENST00000602495 PIP4P2Q8N4L2 257 aa10.23□□□□□ -0.77
XIST-208ENST00000602495 USHBP1Q8N6Y0 703 aa10.23□□□□□ -0.77
XIST-208ENST00000602495 SLC16A10Q8TF71 515 aa10.23□□□□□ -0.77
XIST-208ENST00000602495 WNK3Q9BYP7 1800 aa10.22□□□□□ -0.77
XIST-208ENST00000602495 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
XIST-208ENST00000602495 RAPGEF4Q8WZA2 1011 aa10.22□□□□□ -0.77
XIST-208ENST00000602495 TFCP2L1Q9NZI6 479 aa10.22□□□□□ -0.77
XIST-208ENST00000602495 CGNL1Q0VF96 1302 aa10.22□□□□□ -0.77
XIST-208ENST00000602495 USP47Q96K76 1375 aa10.22□□□□□ -0.77
XIST-208ENST00000602495 PRR29P0C7W0 189 aa10.21□□□□□ -0.77
XIST-208ENST00000602495 MIER1Q8N108 512 aa10.21□□□□□ -0.77
XIST-208ENST00000602495 LTN1O94822 1766 aa10.21□□□□□ -0.78
XIST-208ENST00000602495 CASZ1Q86V15 1759 aa10.21□□□□□ -0.78
XIST-208ENST00000602495 INSRP06213 1382 aa10.2□□□□□ -0.78
XIST-208ENST00000602495 PNPLA7Q6ZV29 1317 aa10.2□□□□□ -0.78
XIST-208ENST00000602495 CCNL1Q9UK58 526 aaPredicted RBP10.2□□□□□ -0.78
XIST-208ENST00000602495 NHSQ6T4R5 1651 aa10.19□□□□□ -0.78
XIST-208ENST00000602495 CYP27B1O15528 508 aa10.19□□□□□ -0.78
XIST-208ENST00000602495 POLD1P28340 1107 aa10.19□□□□□ -0.78
XIST-208ENST00000602495 RTL1A6NKG5 1358 aa10.18□□□□□ -0.78
XIST-208ENST00000602495 NSD2O96028 1365 aa10.18□□□□□ -0.78
XIST-208ENST00000602495 MPRIPQ6WCQ1 1025 aa10.18□□□□□ -0.78
XIST-208ENST00000602495 COL23A1Q86Y22 540 aaPredicted RBP10.18□□□□□ -0.78
XIST-208ENST00000602495 PCGF6Q9BYE7 350 aa10.18□□□□□ -0.78
XIST-208ENST00000602495 EMILIN1Q9Y6C2 1016 aa10.18□□□□□ -0.78
XIST-208ENST00000602495 UTRNP46939 3433 aa10.18□□□□□ -0.78
XIST-208ENST00000602495 MEGF6O75095 1541 aa10.17□□□□□ -0.78
XIST-208ENST00000602495 KIF24Q5T7B8 1368 aa10.17□□□□□ -0.78
XIST-208ENST00000602495 BTAF1O14981 1849 aa10.17□□□□□ -0.78
XIST-208ENST00000602495 WASHC2AQ641Q2 1341 aa10.17□□□□□ -0.78
XIST-208ENST00000602495 PPM1GO15355 546 aaPredicted RBP10.17□□□□□ -0.78
XIST-208ENST00000602495 HMGB2P26583 209 aaKnown RBP10.17□□□□□ -0.78
XIST-208ENST00000602495 NKX1-1Q15270 411 aaPredicted RBP10.17□□□□□ -0.78
XIST-208ENST00000602495 POLKQ9UBT6 870 aa10.17□□□□□ -0.78
XIST-208ENST00000602495 FLT4P35916 1363 aa10.16□□□□□ -0.78
XIST-208ENST00000602495 MAP3K5Q99683 1374 aa10.16□□□□□ -0.78
XIST-208ENST00000602495 GPR162Q16538 588 aa10.16□□□□□ -0.78
XIST-208ENST00000602495 ZNF784Q8NCA9 323 aaPredicted RBP10.16□□□□□ -0.78
XIST-208ENST00000602495 EYA1Q99502 592 aa10.16□□□□□ -0.78
XIST-208ENST00000602495 PCDH11XQ9BZA7 1347 aa10.15□□□□□ -0.78
XIST-208ENST00000602495 PCDH11YQ9BZA8 1340 aa10.15□□□□□ -0.78
XIST-208ENST00000602495 CLSPNQ9HAW4 1339 aa10.15□□□□□ -0.78
XIST-208ENST00000602495 PIGBQ92521 554 aa10.15□□□□□ -0.78
XIST-208ENST00000602495 SMARCC1Q92922 1105 aaPredicted RBP10.15□□□□□ -0.78
XIST-208ENST00000602495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.15□□□□□ -0.78
XIST-208ENST00000602495 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
XIST-208ENST00000602495 SPG7Q9UQ90 795 aa10.15□□□□□ -0.78
XIST-208ENST00000602495 SMG6Q86US8 1419 aaKnown RBP10.15□□□□□ -0.79
XIST-208ENST00000602495 PAPPAQ13219 1627 aa10.15□□□□□ -0.79
XIST-208ENST00000602495 FLAD1Q8NFF5 587 aa10.14□□□□□ -0.79
XIST-208ENST00000602495 POLR3GLQ9BT43 218 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms