RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 NFAT5O94916 1531 aa21.08■□□□□ 0.96
TRIM11-205ENST00000602308 NSD2O96028 1365 aa21.08■□□□□ 0.96
TRIM11-205ENST00000602308 TTC21BQ7Z4L5 1316 aa21.06■□□□□ 0.96
TRIM11-205ENST00000602308 STAC3Q96MF2 364 aa21.06■□□□□ 0.96
TRIM11-205ENST00000602308 CICQ96RK0 1608 aaPredicted RBP21.05■□□□□ 0.96
TRIM11-205ENST00000602308 ANKRD36BQ8N2N9 1353 aa21.04■□□□□ 0.96
TRIM11-205ENST00000602308 HSPA1AP0DMV8 641 aaKnown RBP21.03■□□□□ 0.96
TRIM11-205ENST00000602308 HSPA1BP0DMV9 641 aaKnown RBP21.03■□□□□ 0.96
TRIM11-205ENST00000602308 FSTL1Q12841 308 aa21.03■□□□□ 0.96
TRIM11-205ENST00000602308 PCDH10Q9P2E7 1040 aa21.01■□□□□ 0.95
TRIM11-205ENST00000602308 QRICH2Q9H0J4 1663 aa21.01■□□□□ 0.95
TRIM11-205ENST00000602308 ANKRD24Q8TF21 1146 aa21■□□□□ 0.95
TRIM11-205ENST00000602308 C16orf71Q8IYS4 520 aaPredicted RBP20.99■□□□□ 0.95
TRIM11-205ENST00000602308 FLAD1Q8NFF5 587 aa20.99■□□□□ 0.95
TRIM11-205ENST00000602308 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
TRIM11-205ENST00000602308 NBPF1Q3BBV0 1214 aa20.97■□□□□ 0.95
TRIM11-205ENST00000602308 AMIGO3Q86WK7 504 aa20.97■□□□□ 0.95
TRIM11-205ENST00000602308 TTC21AQ8NDW8 1320 aa20.97■□□□□ 0.95
TRIM11-205ENST00000602308 DOT1LQ8TEK3 1739 aa20.96■□□□□ 0.95
TRIM11-205ENST00000602308 ZNF692Q9BU19 519 aaPredicted RBP20.96■□□□□ 0.95
TRIM11-205ENST00000602308 USP47Q96K76 1375 aa20.95■□□□□ 0.94
TRIM11-205ENST00000602308 SMIM5Q71RC9 77 aa20.94■□□□□ 0.94
TRIM11-205ENST00000602308 ARHGAP27Q6ZUM4 889 aa20.92■□□□□ 0.94
TRIM11-205ENST00000602308 BCS1LQ9Y276 419 aa20.92■□□□□ 0.94
TRIM11-205ENST00000602308 USP54Q70EL1 1684 aa20.92■□□□□ 0.94
TRIM11-205ENST00000602308 C5P01031 1676 aa20.91■□□□□ 0.94
TRIM11-205ENST00000602308 PXDNLA1KZ92 1463 aa20.9■□□□□ 0.94
TRIM11-205ENST00000602308 C9orf131Q5VYM1 1079 aa20.89■□□□□ 0.93
TRIM11-205ENST00000602308 RRAGCQ9HB90 399 aa20.89■□□□□ 0.93
TRIM11-205ENST00000602308 PHF14O94880 888 aa20.88■□□□□ 0.93
TRIM11-205ENST00000602308 KCPQ6ZWJ8 1503 aa20.88■□□□□ 0.93
TRIM11-205ENST00000602308 USP31Q70CQ4 1352 aa20.87■□□□□ 0.93
TRIM11-205ENST00000602308 SMC1BQ8NDV3 1235 aa20.87■□□□□ 0.93
TRIM11-205ENST00000602308 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
TRIM11-205ENST00000602308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.86■□□□□ 0.93
TRIM11-205ENST00000602308 A0A0G2JLW4 131 aa20.86■□□□□ 0.93
TRIM11-205ENST00000602308 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
TRIM11-205ENST00000602308 C10orf71Q711Q0 1435 aa20.86■□□□□ 0.93
TRIM11-205ENST00000602308 LTN1O94822 1766 aa20.85■□□□□ 0.93
TRIM11-205ENST00000602308 KIAA1210Q9ULL0 1709 aa20.85■□□□□ 0.93
TRIM11-205ENST00000602308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.85■□□□□ 0.93
TRIM11-205ENST00000602308 AK7Q96M32 723 aa20.85■□□□□ 0.93
TRIM11-205ENST00000602308 TAF1LQ8IZX4 1826 aa20.85■□□□□ 0.93
TRIM11-205ENST00000602308 KTN1Q86UP2 1357 aaKnown RBP20.85■□□□□ 0.93
TRIM11-205ENST00000602308 PLEKHG2Q9H7P9 1386 aa20.85■□□□□ 0.93
TRIM11-205ENST00000602308 KIAA1551Q9HCM1 1747 aa20.84■□□□□ 0.93
TRIM11-205ENST00000602308 KDM2BQ8NHM5 1336 aa20.84■□□□□ 0.93
TRIM11-205ENST00000602308 LTV1Q96GA3 475 aaPredicted RBP20.84■□□□□ 0.93
TRIM11-205ENST00000602308 PALLDQ8WX93 1383 aa20.84■□□□□ 0.93
TRIM11-205ENST00000602308 EVC2Q86UK5 1308 aa20.83■□□□□ 0.93
TRIM11-205ENST00000602308 TGFB2P61812 414 aa20.83■□□□□ 0.93
TRIM11-205ENST00000602308 NME9Q86XW9 330 aa20.83■□□□□ 0.93
TRIM11-205ENST00000602308 C4BP0C0L5 1744 aa20.83■□□□□ 0.92
TRIM11-205ENST00000602308 HMGB2P26583 209 aaKnown RBP20.82■□□□□ 0.92
TRIM11-205ENST00000602308 N4BP2Q86UW6 1770 aaPredicted RBP20.82■□□□□ 0.92
TRIM11-205ENST00000602308 FCHSD2O94868 740 aa20.81■□□□□ 0.92
TRIM11-205ENST00000602308 FAM161AQ3B820 660 aa20.81■□□□□ 0.92
TRIM11-205ENST00000602308 MEGF6O75095 1541 aa20.8■□□□□ 0.92
TRIM11-205ENST00000602308 UBR3Q6ZT12 1888 aa20.8■□□□□ 0.92
TRIM11-205ENST00000602308 MMP10P09238 476 aa20.8■□□□□ 0.92
TRIM11-205ENST00000602308 IP6K1Q92551 441 aa20.8■□□□□ 0.92
TRIM11-205ENST00000602308 KIF13BQ9NQT8 1826 aa20.79■□□□□ 0.92
TRIM11-205ENST00000602308 DPEP1P16444 411 aa20.79■□□□□ 0.92
TRIM11-205ENST00000602308 SSFA2P28290 1259 aa20.79■□□□□ 0.92
TRIM11-205ENST00000602308 FAM208AQ9UK61 1670 aaKnown RBP20.77■□□□□ 0.91
TRIM11-205ENST00000602308 MPRIPQ6WCQ1 1025 aa20.76■□□□□ 0.91
TRIM11-205ENST00000602308 RNF181Q9P0P0 153 aa20.76■□□□□ 0.91
TRIM11-205ENST00000602308 NSD3Q9BZ95 1437 aa20.76■□□□□ 0.91
TRIM11-205ENST00000602308 PKD1L3Q7Z443 1732 aa20.75■□□□□ 0.91
TRIM11-205ENST00000602308 FOXN1O15353 648 aa20.75■□□□□ 0.91
TRIM11-205ENST00000602308 SBNO2Q9Y2G9 1366 aa20.74■□□□□ 0.91
TRIM11-205ENST00000602308 TNRC6CQ9HCJ0 1690 aaKnown RBP20.74■□□□□ 0.91
TRIM11-205ENST00000602308 KCNA3P22001 575 aa20.74■□□□□ 0.91
TRIM11-205ENST00000602308 LINC00116Q8NCU8 138 aa20.74■□□□□ 0.91
TRIM11-205ENST00000602308 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
TRIM11-205ENST00000602308 PRDM10Q9NQV6 1147 aa20.73■□□□□ 0.91
TRIM11-205ENST00000602308 RAB3GAP2Q9H2M9 1393 aa20.72■□□□□ 0.91
TRIM11-205ENST00000602308 BRCA1P38398 1863 aaKnown RBP20.71■□□□□ 0.91
TRIM11-205ENST00000602308 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
TRIM11-205ENST00000602308 DCAF5Q96JK2 942 aa20.7■□□□□ 0.9
TRIM11-205ENST00000602308 GNPATO15228 680 aa20.69■□□□□ 0.9
TRIM11-205ENST00000602308 MKRN1Q9UHC7 482 aaKnown RBP20.69■□□□□ 0.9
TRIM11-205ENST00000602308 RGPD2P0DJD1 1756 aa20.69■□□□□ 0.9
TRIM11-205ENST00000602308 CD163L1Q9NR16 1453 aa20.69■□□□□ 0.9
TRIM11-205ENST00000602308 ARFGEF1Q9Y6D6 1849 aa20.67■□□□□ 0.9
TRIM11-205ENST00000602308 VEGFAP15692 232 aaPredicted RBP20.67■□□□□ 0.9
TRIM11-205ENST00000602308 HOXC9P31274 260 aa20.67■□□□□ 0.9
TRIM11-205ENST00000602308 NBPF6Q5VWK0 638 aa20.67■□□□□ 0.9
TRIM11-205ENST00000602308 NBPF4Q96M43 638 aa20.67■□□□□ 0.9
TRIM11-205ENST00000602308 CCDC87Q9NVE4 849 aa20.67■□□□□ 0.9
TRIM11-205ENST00000602308 LOC102724428A0A0B4J2F2 783 aa20.66■□□□□ 0.9
TRIM11-205ENST00000602308 SIK1P57059 783 aa20.66■□□□□ 0.9
TRIM11-205ENST00000602308 USHBP1Q8N6Y0 703 aa20.66■□□□□ 0.9
TRIM11-205ENST00000602308 ABHD8Q96I13 439 aa20.66■□□□□ 0.9
TRIM11-205ENST00000602308 PIM2Q9P1W9 311 aa20.66■□□□□ 0.9
TRIM11-205ENST00000602308 CGNL1Q0VF96 1302 aa20.66■□□□□ 0.9
TRIM11-205ENST00000602308 FBLN1P23142 703 aa20.65■□□□□ 0.9
TRIM11-205ENST00000602308 ITPK1Q13572 414 aa20.65■□□□□ 0.9
TRIM11-205ENST00000602308 NLGN1Q8N2Q7 840 aa20.65■□□□□ 0.9
TRIM11-205ENST00000602308 PIGBQ92521 554 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms