RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 CHD2O14647 1828 aaKnown RBP13.77□□□□□ -0.2
SCN1B-205ENST00000602150 MSH6P52701 1360 aa13.77□□□□□ -0.2
SCN1B-205ENST00000602150 MPRIPQ6WCQ1 1025 aa13.77□□□□□ -0.21
SCN1B-205ENST00000602150 AATKQ6ZMQ8 1374 aa13.77□□□□□ -0.21
SCN1B-205ENST00000602150 MON2Q7Z3U7 1717 aa13.77□□□□□ -0.21
SCN1B-205ENST00000602150 ANKRD24Q8TF21 1146 aa13.77□□□□□ -0.21
SCN1B-205ENST00000602150 CDK12Q9NYV4 1490 aaPredicted RBP13.76□□□□□ -0.21
SCN1B-205ENST00000602150 HSP90AA2PQ14568 343 aaPredicted RBP13.76□□□□□ -0.21
SCN1B-205ENST00000602150 CADPS2Q86UW7 1296 aa13.76□□□□□ -0.21
SCN1B-205ENST00000602150 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
SCN1B-205ENST00000602150 C1orf167Q5SNV9 1468 aa13.76□□□□□ -0.21
SCN1B-205ENST00000602150 GOLGA6L3A6NEY3 463 aa13.76□□□□□ -0.21
SCN1B-205ENST00000602150 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
SCN1B-205ENST00000602150 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
SCN1B-205ENST00000602150 SBNO1A3KN83 1393 aa13.76□□□□□ -0.21
SCN1B-205ENST00000602150 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
SCN1B-205ENST00000602150 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
SCN1B-205ENST00000602150 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
SCN1B-205ENST00000602150 PANK2Q9BZ23 570 aa13.75□□□□□ -0.21
SCN1B-205ENST00000602150 AKAP12Q02952 1782 aa13.75□□□□□ -0.21
SCN1B-205ENST00000602150 ZNF142P52746 1687 aaPredicted RBP13.75□□□□□ -0.21
SCN1B-205ENST00000602150 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
SCN1B-205ENST00000602150 PEAK1Q9H792 1746 aa13.74□□□□□ -0.21
SCN1B-205ENST00000602150 PIK3C2AO00443 1686 aa13.74□□□□□ -0.21
SCN1B-205ENST00000602150 HSP90AA1P07900 732 aaKnown RBP13.74□□□□□ -0.21
SCN1B-205ENST00000602150 TRIM27P14373 513 aa13.74□□□□□ -0.21
SCN1B-205ENST00000602150 NAP1L5Q96NT1 182 aaPredicted RBP13.74□□□□□ -0.21
SCN1B-205ENST00000602150 TBC1D2Q9BYX2 928 aa13.74□□□□□ -0.21
SCN1B-205ENST00000602150 LGR6Q9HBX8 967 aa13.74□□□□□ -0.21
SCN1B-205ENST00000602150 SLAIN2Q9P270 581 aa13.74□□□□□ -0.21
SCN1B-205ENST00000602150 ANKARQ7Z5J8 1434 aa13.74□□□□□ -0.21
SCN1B-205ENST00000602150 EIF2S2P20042 333 aaKnown RBP13.74□□□□□ -0.21
SCN1B-205ENST00000602150 TBC1D32Q96NH3 1257 aa13.74□□□□□ -0.21
SCN1B-205ENST00000602150 ANKRD26Q9UPS8 1709 aa13.74□□□□□ -0.21
SCN1B-205ENST00000602150 ANXA1P04083 346 aa13.73□□□□□ -0.21
SCN1B-205ENST00000602150 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
SCN1B-205ENST00000602150 ZNF530Q6P9A1 599 aaPredicted RBP13.73□□□□□ -0.21
SCN1B-205ENST00000602150 LMTK3Q96Q04 1460 aa13.73□□□□□ -0.21
SCN1B-205ENST00000602150 GNAI1P63096 354 aa13.73□□□□□ -0.21
SCN1B-205ENST00000602150 SLC4A10Q6U841 1118 aa13.73□□□□□ -0.21
SCN1B-205ENST00000602150 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 MCM4P33991 863 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 ZKSCAN2Q63HK3 967 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 TMEM57Q8N5G2 664 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 IP6K1Q92551 441 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 PRDM11Q9NQV5 511 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 FMN2Q9NZ56 1722 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 APBB1O00213 710 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 KAT6BQ8WYB5 2073 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 PDE3AQ14432 1141 aa13.72□□□□□ -0.21
SCN1B-205ENST00000602150 KCNQ3O43525 872 aa13.71□□□□□ -0.21
SCN1B-205ENST00000602150 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
SCN1B-205ENST00000602150 NUTM2BA6NNL0 878 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-205ENST00000602150 NUTM2EB1AL46 878 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-205ENST00000602150 F6X3S4 739 aa13.7□□□□□ -0.22
SCN1B-205ENST00000602150 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
SCN1B-205ENST00000602150 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
SCN1B-205ENST00000602150 KCNH5Q8NCM2 988 aa13.7□□□□□ -0.22
SCN1B-205ENST00000602150 STRCP1A6NGW2 1772 aa13.7□□□□□ -0.22
SCN1B-205ENST00000602150 PCDHB15Q9Y5E8 787 aa13.7□□□□□ -0.22
SCN1B-205ENST00000602150 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
SCN1B-205ENST00000602150 VAMP4O75379 141 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 MRE11P49959 708 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 LMOD3Q0VAK6 560 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 CFAP44Q96MT7 982 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 MST1RQ04912 1400 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 IGSF1Q8N6C5 1336 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 ADAMTS2O95450 1211 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 PIP4K2AP48426 406 aaPredicted RBP13.69□□□□□ -0.22
SCN1B-205ENST00000602150 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 NRKQ7Z2Y5 1582 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 NGEFQ8N5V2 710 aa13.69□□□□□ -0.22
SCN1B-205ENST00000602150 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
SCN1B-205ENST00000602150 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
SCN1B-205ENST00000602150 SLC39A6Q13433 755 aa13.68□□□□□ -0.22
SCN1B-205ENST00000602150 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
SCN1B-205ENST00000602150 ATF7IPQ6VMQ6 1270 aa13.67□□□□□ -0.22
SCN1B-205ENST00000602150 G2E3Q7L622 706 aa13.67□□□□□ -0.22
SCN1B-205ENST00000602150 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
SCN1B-205ENST00000602150 ERBB4Q15303 1308 aa13.67□□□□□ -0.22
SCN1B-205ENST00000602150 TRAK2O60296 914 aa13.67□□□□□ -0.22
SCN1B-205ENST00000602150 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
SCN1B-205ENST00000602150 TEFQ10587 303 aa13.66□□□□□ -0.22
SCN1B-205ENST00000602150 TOM1L2Q6ZVM7 507 aa13.66□□□□□ -0.22
SCN1B-205ENST00000602150 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
SCN1B-205ENST00000602150 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
SCN1B-205ENST00000602150 RAPGEF4Q8WZA2 1011 aa13.66□□□□□ -0.22
SCN1B-205ENST00000602150 ESPNB1AK53 854 aa13.66□□□□□ -0.22
SCN1B-205ENST00000602150 C1orf141Q5JVX7 400 aa13.66□□□□□ -0.22
SCN1B-205ENST00000602150 CALD1Q05682 793 aaKnown RBP13.65□□□□□ -0.22
SCN1B-205ENST00000602150 GZF1Q9H116 711 aaPredicted RBP13.65□□□□□ -0.22
SCN1B-205ENST00000602150 ISY1Q9ULR0 285 aaKnown RBP13.65□□□□□ -0.22
SCN1B-205ENST00000602150 GRPEL1Q9HAV7 217 aa13.65□□□□□ -0.23
SCN1B-205ENST00000602150 EVA1CP58658 441 aa13.64□□□□□ -0.23
SCN1B-205ENST00000602150 MVPQ14764 893 aaKnown RBP13.64□□□□□ -0.23
SCN1B-205ENST00000602150 ARXQ96QS3 562 aa13.64□□□□□ -0.23
SCN1B-205ENST00000602150 UPF2Q9HAU5 1272 aaKnown RBP13.64□□□□□ -0.23
SCN1B-205ENST00000602150 ARHGEF10O15013 1369 aa13.64□□□□□ -0.23
SCN1B-205ENST00000602150 CHMP5Q9NZZ3 219 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms