RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 PLEKHO1Q53GL0 409 aaPredicted RBP22.85■■□□□ 1.25
DDX49-213ENST00000602113 CRB1P82279 1406 aa22.85■■□□□ 1.25
DDX49-213ENST00000602113 IL16Q14005 1332 aa22.84■■□□□ 1.25
DDX49-213ENST00000602113 TATP17735 454 aaPredicted RBP22.84■■□□□ 1.25
DDX49-213ENST00000602113 AMOTQ4VCS5 1084 aa22.84■■□□□ 1.25
DDX49-213ENST00000602113 SLIT2O94813 1529 aa22.83■■□□□ 1.25
DDX49-213ENST00000602113 MCM10Q7L590 875 aa22.83■■□□□ 1.24
DDX49-213ENST00000602113 NRAPQ86VF7 1730 aa22.83■■□□□ 1.24
DDX49-213ENST00000602113 MAP3K5Q99683 1374 aa22.82■■□□□ 1.24
DDX49-213ENST00000602113 GNAT3A8MTJ3 354 aa22.81■■□□□ 1.24
DDX49-213ENST00000602113 ZNF530Q6P9A1 599 aaPredicted RBP22.81■■□□□ 1.24
DDX49-213ENST00000602113 PLEKHG2Q9H7P9 1386 aa22.81■■□□□ 1.24
DDX49-213ENST00000602113 HTATSF1O43719 755 aaKnown RBP22.81■■□□□ 1.24
DDX49-213ENST00000602113 C8orf37Q96NL8 207 aa22.8■■□□□ 1.24
DDX49-213ENST00000602113 OVOS2A0A0G2JMS6 1433 aa22.8■■□□□ 1.24
DDX49-213ENST00000602113 NWD2Q9ULI1 1742 aa22.79■■□□□ 1.24
DDX49-213ENST00000602113 CALD1Q05682 793 aaKnown RBP22.79■■□□□ 1.24
DDX49-213ENST00000602113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.79■■□□□ 1.24
DDX49-213ENST00000602113 USP35Q9P2H5 1018 aa22.79■■□□□ 1.24
DDX49-213ENST00000602113 RTF1Q92541 710 aaKnown RBP22.78■■□□□ 1.24
DDX49-213ENST00000602113 NGLY1Q96IV0 654 aa22.78■■□□□ 1.24
DDX49-213ENST00000602113 MYH16Q9H6N6 1097 aa22.78■■□□□ 1.24
DDX49-213ENST00000602113 AKAP4Q5JQC9 854 aa22.77■■□□□ 1.24
DDX49-213ENST00000602113 IL17REQ8NFR9 667 aa22.77■■□□□ 1.24
DDX49-213ENST00000602113 TSR2Q969E8 191 aaKnown RBP22.77■■□□□ 1.24
DDX49-213ENST00000602113 ZNF853P0CG23 659 aa22.77■■□□□ 1.24
DDX49-213ENST00000602113 IL2RBP14784 551 aa22.77■■□□□ 1.24
DDX49-213ENST00000602113 SPG7Q9UQ90 795 aa22.77■■□□□ 1.24
DDX49-213ENST00000602113 FANCIQ9NVI1 1328 aa22.77■■□□□ 1.23
DDX49-213ENST00000602113 PKD1L3Q7Z443 1732 aa22.76■■□□□ 1.23
DDX49-213ENST00000602113 IFT57Q9NWB7 429 aa22.76■■□□□ 1.23
DDX49-213ENST00000602113 PARP4Q9UKK3 1724 aaKnown RBP22.76■■□□□ 1.23
DDX49-213ENST00000602113 BCL9LQ86UU0 1499 aa22.75■■□□□ 1.23
DDX49-213ENST00000602113 FNBP4Q8N3X1 1017 aaPredicted RBP22.75■■□□□ 1.23
DDX49-213ENST00000602113 LAS1LQ9Y4W2 734 aaKnown RBP22.75■■□□□ 1.23
DDX49-213ENST00000602113 C1orf141Q5JVX7 400 aa22.74■■□□□ 1.23
DDX49-213ENST00000602113 UNC5CLQ8IV45 518 aa22.74■■□□□ 1.23
DDX49-213ENST00000602113 LRRC37A3O60309 1634 aa22.74■■□□□ 1.23
DDX49-213ENST00000602113 GNAI1P63096 354 aa22.74■■□□□ 1.23
DDX49-213ENST00000602113 CFAP44Q96MT7 982 aa22.74■■□□□ 1.23
DDX49-213ENST00000602113 SPATA31A1Q5TZJ5 1347 aa22.74■■□□□ 1.23
DDX49-213ENST00000602113 DISP2A7MBM2 1401 aa22.73■■□□□ 1.23
DDX49-213ENST00000602113 LGR6Q9HBX8 967 aa22.73■■□□□ 1.23
DDX49-213ENST00000602113 SUPT16HQ9Y5B9 1047 aaKnown RBP22.73■■□□□ 1.23
DDX49-213ENST00000602113 CEMIPQ8WUJ3 1361 aa22.73■■□□□ 1.23
DDX49-213ENST00000602113 CYP27B1O15528 508 aa22.72■■□□□ 1.23
DDX49-213ENST00000602113 PHKG2P15735 406 aa22.72■■□□□ 1.23
DDX49-213ENST00000602113 MPRIPQ6WCQ1 1025 aa22.72■■□□□ 1.23
DDX49-213ENST00000602113 ZCRB1Q8TBF4 217 aaKnown RBP22.72■■□□□ 1.23
DDX49-213ENST00000602113 SPATA31A5Q5VU36 1347 aa22.72■■□□□ 1.23
DDX49-213ENST00000602113 SPATA31A7Q8IWB4 1347 aa22.72■■□□□ 1.23
DDX49-213ENST00000602113 MEX3CQ5U5Q3 659 aaKnown RBP22.71■■□□□ 1.23
DDX49-213ENST00000602113 MBIPQ9NS73 344 aa22.71■■□□□ 1.23
DDX49-213ENST00000602113 RCAN3Q9UKA8 241 aa22.71■■□□□ 1.23
DDX49-213ENST00000602113 CHL1O00533 1208 aa22.71■■□□□ 1.23
DDX49-213ENST00000602113 RNMTO43148 476 aaKnown RBP22.7■■□□□ 1.22
DDX49-213ENST00000602113 IFNL2Q8IZJ0 200 aa22.7■■□□□ 1.22
DDX49-213ENST00000602113 EXOSC9Q06265 439 aaKnown RBP22.69■■□□□ 1.22
DDX49-213ENST00000602113 VPS72Q15906 364 aa22.68■■□□□ 1.22
DDX49-213ENST00000602113 USP21Q9UK80 565 aa22.68■■□□□ 1.22
DDX49-213ENST00000602113 KDM6AO15550 1401 aaPredicted RBP22.68■■□□□ 1.22
DDX49-213ENST00000602113 ADAMTS7Q9UKP4 1686 aa22.68■■□□□ 1.22
DDX49-213ENST00000602113 PCDH11XQ9BZA7 1347 aa22.68■■□□□ 1.22
DDX49-213ENST00000602113 PCDH11YQ9BZA8 1340 aa22.68■■□□□ 1.22
DDX49-213ENST00000602113 THRAP3Q9Y2W1 955 aaKnown RBP22.68■■□□□ 1.22
DDX49-213ENST00000602113 MIS18AQ9NYP9 233 aa22.67■■□□□ 1.22
DDX49-213ENST00000602113 CCDC9Q9Y3X0 531 aaKnown RBP22.67■■□□□ 1.22
DDX49-213ENST00000602113 SHANK3Q9BYB0 1731 aa22.67■■□□□ 1.22
DDX49-213ENST00000602113 WNK3Q9BYP7 1800 aa22.67■■□□□ 1.22
DDX49-213ENST00000602113 FBXO41Q8TF61 875 aa22.66■■□□□ 1.22
DDX49-213ENST00000602113 AFF2P51816 1311 aa22.66■■□□□ 1.22
DDX49-213ENST00000602113 TAF7Q15545 349 aaPredicted RBP22.65■■□□□ 1.22
DDX49-213ENST00000602113 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.65■■□□□ 1.22
DDX49-213ENST00000602113 RNF123Q5XPI4 1314 aa22.64■■□□□ 1.21
DDX49-213ENST00000602113 BARGINQ6ZT62 677 aa22.64■■□□□ 1.21
DDX49-213ENST00000602113 DDX54Q8TDD1 881 aaKnown RBP22.64■■□□□ 1.21
DDX49-213ENST00000602113 DCAF5Q96JK2 942 aa22.63■■□□□ 1.21
DDX49-213ENST00000602113 CDCA7Q9BWT1 371 aaPredicted RBP22.63■■□□□ 1.21
DDX49-213ENST00000602113 TSPYL4Q9UJ04 414 aa22.63■■□□□ 1.21
DDX49-213ENST00000602113 HSP90AB1P08238 724 aaKnown RBP22.62■■□□□ 1.21
DDX49-213ENST00000602113 TEFQ10587 303 aa22.62■■□□□ 1.21
DDX49-213ENST00000602113 VIRMAQ69YN4 1812 aaKnown RBP22.62■■□□□ 1.21
DDX49-213ENST00000602113 NKX1-1Q15270 411 aaPredicted RBP22.62■■□□□ 1.21
DDX49-213ENST00000602113 BABAM1Q9NWV8 329 aa22.62■■□□□ 1.21
DDX49-213ENST00000602113 SCN11AQ9UI33 1791 aa22.61■■□□□ 1.21
DDX49-213ENST00000602113 CT47B1P0C2W7 299 aaPredicted RBP22.61■■□□□ 1.21
DDX49-213ENST00000602113 TSPYL6Q8N831 410 aa22.61■■□□□ 1.21
DDX49-213ENST00000602113 C8orf58Q8NAV2 365 aa22.61■■□□□ 1.21
DDX49-213ENST00000602113 EXOC5O00471 708 aa22.6■■□□□ 1.21
DDX49-213ENST00000602113 TNS2Q63HR2 1409 aa22.6■■□□□ 1.21
DDX49-213ENST00000602113 RARSP54136 660 aaKnown RBP22.59■■□□□ 1.21
DDX49-213ENST00000602113 KRT24Q2M2I5 525 aa22.59■■□□□ 1.21
DDX49-213ENST00000602113 SLC52A2Q9HAB3 445 aa22.58■■□□□ 1.21
DDX49-213ENST00000602113 MRC1P22897 1456 aa22.58■■□□□ 1.21
DDX49-213ENST00000602113 SIPA1L3O60292 1781 aaPredicted RBP22.58■■□□□ 1.21
DDX49-213ENST00000602113 ATRNO75882 1429 aa22.58■■□□□ 1.2
DDX49-213ENST00000602113 BCAR3O75815 825 aa22.58■■□□□ 1.2
DDX49-213ENST00000602113 FAM98CQ17RN3 349 aaKnown RBP22.58■■□□□ 1.2
DDX49-213ENST00000602113 ELL2O00472 640 aaPredicted RBP22.57■■□□□ 1.2
DDX49-213ENST00000602113 VAMP4O75379 141 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms