RNA–Protein interactions for RNA: ENST00000601769.5

CD22-231, Transcript of CD22 molecule, human

TSL 2

Gene CD22, Length 3,060 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD22-231	ENST00000601769	DCC	P43146	1447 aa		13.57	□□□□□ -0.24
CD22-231	ENST00000601769	MED1	Q15648	1581 aa	Predicted RBP	13.57	□□□□□ -0.24
CD22-231	ENST00000601769	VAMP4	O75379	141 aa		13.57	□□□□□ -0.24
CD22-231	ENST00000601769	TRIM27	P14373	513 aa		13.57	□□□□□ -0.24
CD22-231	ENST00000601769	CRB1	P82279	1406 aa		13.56	□□□□□ -0.24
CD22-231	ENST00000601769	GC	P02774	474 aa		13.56	□□□□□ -0.24
CD22-231	ENST00000601769	KRT24	Q2M2I5	525 aa		13.56	□□□□□ -0.24
CD22-231	ENST00000601769	USP19	O94966	1318 aa		13.56	□□□□□ -0.24
CD22-231	ENST00000601769	LRRC37A3	O60309	1634 aa		13.56	□□□□□ -0.24
CD22-231	ENST00000601769	IGHD	P01880	384 aa		13.55	□□□□□ -0.24
CD22-231	ENST00000601769	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.55	□□□□□ -0.24
CD22-231	ENST00000601769	KCNH5	Q8NCM2	988 aa		13.55	□□□□□ -0.24
CD22-231	ENST00000601769	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.55	□□□□□ -0.24
CD22-231	ENST00000601769	NCOA3	Q9Y6Q9	1424 aa		13.55	□□□□□ -0.24
CD22-231	ENST00000601769	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.55	□□□□□ -0.24
CD22-231	ENST00000601769	NPM2	Q86SE8	214 aa	Known RBP	13.55	□□□□□ -0.24
CD22-231	ENST00000601769	DZIP1L	Q8IYY4	767 aa	Known RBP	13.55	□□□□□ -0.24
CD22-231	ENST00000601769	LRRC59	Q96AG4	307 aa	Known RBP	13.55	□□□□□ -0.24
CD22-231	ENST00000601769	NBPF6	Q5VWK0	638 aa		13.54	□□□□□ -0.24
CD22-231	ENST00000601769	NBPF4	Q96M43	638 aa		13.54	□□□□□ -0.24
CD22-231	ENST00000601769	MSH6	P52701	1360 aa		13.54	□□□□□ -0.24
CD22-231	ENST00000601769	TWISTNB	Q3B726	338 aa	Predicted RBP	13.54	□□□□□ -0.24
CD22-231	ENST00000601769	ALDH1L2	Q3SY69	923 aa		13.54	□□□□□ -0.24
CD22-231	ENST00000601769	ATF7IP	Q6VMQ6	1270 aa		13.54	□□□□□ -0.24
CD22-231	ENST00000601769	ARHGEF25	Q86VW2	580 aa		13.54	□□□□□ -0.24
CD22-231	ENST00000601769	MIS18A	Q9NYP9	233 aa		13.54	□□□□□ -0.24
CD22-231	ENST00000601769	MVP	Q14764	893 aa	Known RBP	13.53	□□□□□ -0.24
CD22-231	ENST00000601769	FTSJ3	Q8IY81	847 aa	Known RBP	13.53	□□□□□ -0.24
CD22-231	ENST00000601769	PCDHB15	Q9Y5E8	787 aa		13.53	□□□□□ -0.24
CD22-231	ENST00000601769	CRYBG1	Q9Y4K1	1723 aa		13.53	□□□□□ -0.24
CD22-231	ENST00000601769	CHL1	O00533	1208 aa		13.53	□□□□□ -0.24
CD22-231	ENST00000601769	MRPL50	Q8N5N7	158 aa	Known RBP	13.53	□□□□□ -0.24
CD22-231	ENST00000601769	VIRMA	Q69YN4	1812 aa	Known RBP	13.52	□□□□□ -0.24
CD22-231	ENST00000601769	KIF16B	Q96L93	1317 aa		13.52	□□□□□ -0.25
CD22-231	ENST00000601769	CADPS2	Q86UW7	1296 aa		13.52	□□□□□ -0.25
CD22-231	ENST00000601769	TMEM57	Q8N5G2	664 aa		13.52	□□□□□ -0.25
CD22-231	ENST00000601769	AXIN2	Q9Y2T1	843 aa		13.52	□□□□□ -0.25
CD22-231	ENST00000601769	PXDN	Q92626	1479 aa		13.52	□□□□□ -0.25
CD22-231	ENST00000601769	PDE4C	Q08493	712 aa		13.51	□□□□□ -0.25
CD22-231	ENST00000601769	GAS2L2	Q8NHY3	880 aa		13.51	□□□□□ -0.25
CD22-231	ENST00000601769	CAMTA1	Q9Y6Y1	1673 aa		13.51	□□□□□ -0.25
CD22-231	ENST00000601769	ZC3H6	P61129	1189 aa	Known RBP	13.5	□□□□□ -0.25
CD22-231	ENST00000601769	ITPRIP	Q8IWB1	547 aa		13.5	□□□□□ -0.25
CD22-231	ENST00000601769	CABLES1	Q8TDN4	633 aa		13.5	□□□□□ -0.25
CD22-231	ENST00000601769	RTF1	Q92541	710 aa	Known RBP	13.5	□□□□□ -0.25
CD22-231	ENST00000601769	COL18A1	P39060	1754 aa		13.49	□□□□□ -0.25
CD22-231	ENST00000601769	LTBP4	Q8N2S1	1624 aa		13.49	□□□□□ -0.25
CD22-231	ENST00000601769	MAP3K5	Q99683	1374 aa		13.49	□□□□□ -0.25
CD22-231	ENST00000601769	BRPF1	P55201	1214 aa	Predicted RBP	13.49	□□□□□ -0.25
CD22-231	ENST00000601769	TPRN	Q4KMQ1	711 aa		13.49	□□□□□ -0.25
CD22-231	ENST00000601769	ANKRD24	Q8TF21	1146 aa		13.49	□□□□□ -0.25
CD22-231	ENST00000601769	ZNF428	Q96B54	188 aa		13.49	□□□□□ -0.25
CD22-231	ENST00000601769	TNS3	Q68CZ2	1445 aa		13.49	□□□□□ -0.25
CD22-231	ENST00000601769	GNAT3	A8MTJ3	354 aa		13.48	□□□□□ -0.25
CD22-231	ENST00000601769	IL17RE	Q8NFR9	667 aa		13.48	□□□□□ -0.25
CD22-231	ENST00000601769	LMO7	Q8WWI1	1683 aa		13.48	□□□□□ -0.25
CD22-231	ENST00000601769	BRINP3	Q76B58	766 aa		13.48	□□□□□ -0.25
CD22-231	ENST00000601769	NPHP3	Q7Z494	1330 aa		13.48	□□□□□ -0.25
CD22-231	ENST00000601769	IPO8	O15397	1037 aa	Known RBP	13.47	□□□□□ -0.25
CD22-231	ENST00000601769	TSPYL4	Q9UJ04	414 aa		13.47	□□□□□ -0.25
CD22-231	ENST00000601769	NCAPD2	Q15021	1401 aa		13.47	□□□□□ -0.25
CD22-231	ENST00000601769	MS4A1	P11836	297 aa		13.47	□□□□□ -0.25
CD22-231	ENST00000601769	KIAA0232	Q92628	1395 aa		13.46	□□□□□ -0.25
CD22-231	ENST00000601769	RGS3	P49796	1198 aa		13.46	□□□□□ -0.25
CD22-231	ENST00000601769	DDX19B	Q9UMR2	479 aa		13.46	□□□□□ -0.25
CD22-231	ENST00000601769	FAM208A	Q9UK61	1670 aa	Known RBP	13.45	□□□□□ -0.26
CD22-231	ENST00000601769	SPATA31A3	Q5VYP0	1347 aa		13.45	□□□□□ -0.26
CD22-231	ENST00000601769	HTATSF1	O43719	755 aa	Known RBP	13.45	□□□□□ -0.26
CD22-231	ENST00000601769	PDE4A	P27815	886 aa		13.45	□□□□□ -0.26
CD22-231	ENST00000601769	ABCC4	O15439	1325 aa		13.44	□□□□□ -0.26
CD22-231	ENST00000601769	RGS12	O14924	1447 aa		13.44	□□□□□ -0.26
CD22-231	ENST00000601769	AAMP	Q13685	434 aa		13.44	□□□□□ -0.26
CD22-231	ENST00000601769	CHRNA2	Q15822	529 aa		13.44	□□□□□ -0.26
CD22-231	ENST00000601769	LGR6	Q9HBX8	967 aa		13.44	□□□□□ -0.26
CD22-231	ENST00000601769	ERBB3	P21860	1342 aa		13.44	□□□□□ -0.26
CD22-231	ENST00000601769	KDM3B	Q7LBC6	1761 aa		13.44	□□□□□ -0.26
CD22-231	ENST00000601769	ZBTB40	Q9NUA8	1239 aa		13.43	□□□□□ -0.26
CD22-231	ENST00000601769	ARHGAP45	Q92619	1136 aa		13.43	□□□□□ -0.26
CD22-231	ENST00000601769	ABCA3	Q99758	1704 aa		13.43	□□□□□ -0.26
CD22-231	ENST00000601769	SLAIN2	Q9P270	581 aa		13.43	□□□□□ -0.26
CD22-231	ENST00000601769	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.42	□□□□□ -0.26
CD22-231	ENST00000601769	BACH2	Q9BYV9	841 aa		13.42	□□□□□ -0.26
CD22-231	ENST00000601769	CEMIP	Q8WUJ3	1361 aa		13.42	□□□□□ -0.26
CD22-231	ENST00000601769	C1orf115	Q9H7X2	142 aa		13.41	□□□□□ -0.26
CD22-231	ENST00000601769	ZBTB7B	O15156	539 aa	Predicted RBP	13.41	□□□□□ -0.26
CD22-231	ENST00000601769	MPRIP	Q6WCQ1	1025 aa		13.41	□□□□□ -0.26
CD22-231	ENST00000601769	G2E3	Q7L622	706 aa		13.41	□□□□□ -0.26
CD22-231	ENST00000601769	TAF7	Q15545	349 aa	Predicted RBP	13.4	□□□□□ -0.26
CD22-231	ENST00000601769	NECTIN2	Q92692	538 aa		13.4	□□□□□ -0.26
CD22-231	ENST00000601769	PDZRN3	Q9UPQ7	1066 aa		13.4	□□□□□ -0.26
CD22-231	ENST00000601769	NHSL1	Q5SYE7	1610 aa		13.4	□□□□□ -0.26
CD22-231	ENST00000601769	SIPA1L3	O60292	1781 aa	Predicted RBP	13.4	□□□□□ -0.26
CD22-231	ENST00000601769	MSH5	O43196	834 aa		13.4	□□□□□ -0.26
CD22-231	ENST00000601769	RWDD1	Q9H446	243 aa	Predicted RBP	13.4	□□□□□ -0.26
CD22-231	ENST00000601769	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.39	□□□□□ -0.27
CD22-231	ENST00000601769	API5	Q9BZZ5	524 aa	Known RBP	13.39	□□□□□ -0.27
CD22-231	ENST00000601769	SLC4A2	P04920	1241 aa		13.39	□□□□□ -0.27
CD22-231	ENST00000601769	AKAP4	Q5JQC9	854 aa		13.39	□□□□□ -0.27
CD22-231	ENST00000601769	ANP32E	Q9BTT0	268 aa		13.39	□□□□□ -0.27
CD22-231	ENST00000601769	NLRP2	Q9NX02	1062 aa		13.39	□□□□□ -0.27

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