RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, humanhuman

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-211ENST00000601685 GPT2Q8TD30 523 aa20.4■□□□□ 0.86
CAPN12-211ENST00000601685 ZGPATQ8N5A5 531 aaKnown RBP20.39■□□□□ 0.85
CAPN12-211ENST00000601685 ZDHHC9Q9Y397 364 aa20.39■□□□□ 0.85
CAPN12-211ENST00000601685 ANKRD44Q8N8A2 993 aa20.38■□□□□ 0.85
CAPN12-211ENST00000601685 SDSP20132 328 aa20.38■□□□□ 0.85
CAPN12-211ENST00000601685 CASC1Q6TDU7 716 aa20.37■□□□□ 0.85
CAPN12-211ENST00000601685 RBM27Q9P2N5 1060 aaKnown RBP20.37■□□□□ 0.85
CAPN12-211ENST00000601685 R3HCC1Q9Y3T6 440 aaKnown RBP20.37■□□□□ 0.85
CAPN12-211ENST00000601685 ATP10DQ9P241 1426 aa20.37■□□□□ 0.85
CAPN12-211ENST00000601685 IL13P35225 146 aa20.37■□□□□ 0.85
CAPN12-211ENST00000601685 LMOD3Q0VAK6 560 aa20.37■□□□□ 0.85
CAPN12-211ENST00000601685 OTUD7AQ8TE49 926 aaPredicted RBP20.36■□□□□ 0.85
CAPN12-211ENST00000601685 LRSAM1Q6UWE0 723 aa20.36■□□□□ 0.85
CAPN12-211ENST00000601685 RPAP2Q8IXW5 612 aaPredicted RBP20.35■□□□□ 0.85
CAPN12-211ENST00000601685 ZKSCAN5Q9Y2L8 839 aa20.35■□□□□ 0.85
CAPN12-211ENST00000601685 EMILIN1Q9Y6C2 1016 aa20.35■□□□□ 0.85
CAPN12-211ENST00000601685 MAP2P11137 1827 aaKnown RBP20.34■□□□□ 0.85
CAPN12-211ENST00000601685 MCM5P33992 734 aa20.34■□□□□ 0.85
CAPN12-211ENST00000601685 TMEM63CQ9P1W3 806 aa20.34■□□□□ 0.85
CAPN12-211ENST00000601685 RIMS2Q9UQ26 1411 aa20.34■□□□□ 0.85
CAPN12-211ENST00000601685 REC8O95072 547 aa20.34■□□□□ 0.85
CAPN12-211ENST00000601685 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
CAPN12-211ENST00000601685 RBM10P98175 930 aaKnown RBP20.33■□□□□ 0.85
CAPN12-211ENST00000601685 MAP7D2Q96T17 732 aa20.33■□□□□ 0.85
CAPN12-211ENST00000601685 ATP7BP35670 1465 aa20.33■□□□□ 0.84
CAPN12-211ENST00000601685 CEP85Q6P2H3 762 aa20.33■□□□□ 0.84
CAPN12-211ENST00000601685 DLG5Q8TDM6 1919 aa20.32■□□□□ 0.84
CAPN12-211ENST00000601685 CDK12Q9NYV4 1490 aaPredicted RBP20.31■□□□□ 0.84
CAPN12-211ENST00000601685 CSPP1Q1MSJ5 1256 aa20.31■□□□□ 0.84
CAPN12-211ENST00000601685 CPSF1Q10570 1443 aaKnown RBP20.31■□□□□ 0.84
CAPN12-211ENST00000601685 SYCE3A1L190 88 aa20.31■□□□□ 0.84
CAPN12-211ENST00000601685 CCDC39Q9UFE4 941 aa20.31■□□□□ 0.84
CAPN12-211ENST00000601685 RGS12O14924 1447 aa20.3■□□□□ 0.84
CAPN12-211ENST00000601685 ERC2O15083 957 aa20.3■□□□□ 0.84
CAPN12-211ENST00000601685 SMARCA5O60264 1052 aaPredicted RBP20.3■□□□□ 0.84
CAPN12-211ENST00000601685 NME9Q86XW9 330 aa20.3■□□□□ 0.84
CAPN12-211ENST00000601685 FAM83GA6ND36 823 aa20.3■□□□□ 0.84
CAPN12-211ENST00000601685 NSFL1CQ9UNZ2 370 aaKnown RBP20.3■□□□□ 0.84
CAPN12-211ENST00000601685 UQCRHLA0A096LP55 91 aa20.29■□□□□ 0.84
CAPN12-211ENST00000601685 MBD3O95983 291 aa20.29■□□□□ 0.84
CAPN12-211ENST00000601685 UQCRHP07919 91 aa20.29■□□□□ 0.84
CAPN12-211ENST00000601685 ZRANB1Q9UGI0 708 aa20.29■□□□□ 0.84
CAPN12-211ENST00000601685 CHAMP1Q96JM3 812 aa20.29■□□□□ 0.84
CAPN12-211ENST00000601685 RTL1A6NKG5 1358 aa20.28■□□□□ 0.84
CAPN12-211ENST00000601685 FAM13BQ9NYF5 915 aa20.28■□□□□ 0.84
CAPN12-211ENST00000601685 DLC1Q96QB1 1528 aa20.28■□□□□ 0.84
CAPN12-211ENST00000601685 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
CAPN12-211ENST00000601685 AATKQ6ZMQ8 1374 aa20.27■□□□□ 0.83
CAPN12-211ENST00000601685 A2ML1A8K2U0 1454 aa20.26■□□□□ 0.83
CAPN12-211ENST00000601685 MSH6P52701 1360 aa20.26■□□□□ 0.83
CAPN12-211ENST00000601685 APBB1O00213 710 aa20.26■□□□□ 0.83
CAPN12-211ENST00000601685 HAP1P54257 671 aaPredicted RBP20.26■□□□□ 0.83
CAPN12-211ENST00000601685 TMX3Q96JJ7 454 aa20.26■□□□□ 0.83
CAPN12-211ENST00000601685 EDC4Q6P2E9 1401 aaKnown RBP20.26■□□□□ 0.83
CAPN12-211ENST00000601685 WASLO00401 505 aaPredicted RBP20.25■□□□□ 0.83
CAPN12-211ENST00000601685 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
CAPN12-211ENST00000601685 OSBPL3Q9H4L5 887 aa20.25■□□□□ 0.83
CAPN12-211ENST00000601685 DYNC1I1O14576 645 aa20.25■□□□□ 0.83
CAPN12-211ENST00000601685 BRD1O95696 1058 aa20.25■□□□□ 0.83
CAPN12-211ENST00000601685 MCM2P49736 904 aa20.24■□□□□ 0.83
CAPN12-211ENST00000601685 NCKAP5LQ9HCH0 1330 aa20.24■□□□□ 0.83
CAPN12-211ENST00000601685 NEK4P51957 841 aa20.24■□□□□ 0.83
CAPN12-211ENST00000601685 MEIS3Q99687 375 aa20.24■□□□□ 0.83
CAPN12-211ENST00000601685 FOXD4L5Q5VV16 416 aaPredicted RBP20.23■□□□□ 0.83
CAPN12-211ENST00000601685 SASS6Q6UVJ0 657 aa20.23■□□□□ 0.83
CAPN12-211ENST00000601685 FOXD4L4Q8WXT5 416 aaPredicted RBP20.23■□□□□ 0.83
CAPN12-211ENST00000601685 PTPRCP08575 1304 aa20.23■□□□□ 0.83
CAPN12-211ENST00000601685 RIMBP3CA6NJZ7 1639 aa20.23■□□□□ 0.83
CAPN12-211ENST00000601685 RIMBP3BA6NNM3 1639 aa20.23■□□□□ 0.83
CAPN12-211ENST00000601685 RIMBP3Q9UFD9 1639 aa20.23■□□□□ 0.83
CAPN12-211ENST00000601685 SETD1AO15047 1707 aaKnown RBP20.23■□□□□ 0.83
CAPN12-211ENST00000601685 CUL4AQ13619 759 aa20.23■□□□□ 0.83
CAPN12-211ENST00000601685 MTERF4Q7Z6M4 381 aaKnown RBP20.22■□□□□ 0.83
CAPN12-211ENST00000601685 RNF214Q8ND24 703 aa20.22■□□□□ 0.83
CAPN12-211ENST00000601685 KRT24Q2M2I5 525 aa20.22■□□□□ 0.83
CAPN12-211ENST00000601685 TXNDC2Q86VQ3 553 aa20.22■□□□□ 0.83
CAPN12-211ENST00000601685 COG3Q96JB2 828 aa20.22■□□□□ 0.83
CAPN12-211ENST00000601685 PDE1AP54750 535 aa20.21■□□□□ 0.83
CAPN12-211ENST00000601685 TSPY26PQ9H489 355 aa20.21■□□□□ 0.83
CAPN12-211ENST00000601685 HMMRO75330 724 aa20.2■□□□□ 0.82
CAPN12-211ENST00000601685 MLECQ14165 292 aa20.2■□□□□ 0.82
CAPN12-211ENST00000601685 KIAA0232Q92628 1395 aa20.2■□□□□ 0.82
CAPN12-211ENST00000601685 NUDT16Q96DE0 195 aaKnown RBP20.2■□□□□ 0.82
CAPN12-211ENST00000601685 METP08581 1390 aa20.2■□□□□ 0.82
CAPN12-211ENST00000601685 CHL1O00533 1208 aa20.2■□□□□ 0.82
CAPN12-211ENST00000601685 INTS4Q96HW7 963 aaKnown RBP20.19■□□□□ 0.82
CAPN12-211ENST00000601685 SYAP1Q96A49 352 aaPredicted RBP20.19■□□□□ 0.82
CAPN12-211ENST00000601685 FAM69CQ0P6D2 419 aa20.18■□□□□ 0.82
CAPN12-211ENST00000601685 CPS1P31327 1500 aa20.18■□□□□ 0.82
CAPN12-211ENST00000601685 ESYT1Q9BSJ8 1104 aa20.18■□□□□ 0.82
CAPN12-211ENST00000601685 CCDC61Q9Y6R9 512 aa20.18■□□□□ 0.82
CAPN12-211ENST00000601685 SPATA31D1Q6ZQQ2 1576 aa20.17■□□□□ 0.82
CAPN12-211ENST00000601685 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
CAPN12-211ENST00000601685 PTMAP06454 111 aaKnown RBP20.16■□□□□ 0.82
CAPN12-211ENST00000601685 MCCP23508 829 aa20.16■□□□□ 0.82
CAPN12-211ENST00000601685 ANAPC15P60006 121 aa20.16■□□□□ 0.82
CAPN12-211ENST00000601685 KIAA2012Q0VF49 1180 aa20.16■□□□□ 0.82
CAPN12-211ENST00000601685 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.16■□□□□ 0.82
CAPN12-211ENST00000601685 NRXN3Q9Y4C0 1643 aa20.15■□□□□ 0.82
CAPN12-211ENST00000601685 SALL3Q9BXA9 1300 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms