RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 BTAF1O14981 1849 aa14.5□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 KTN1Q86UP2 1357 aaKnown RBP14.49□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 SBNO2Q9Y2G9 1366 aa14.49□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 RGPD2P0DJD1 1756 aa14.49□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 TTC21AQ8NDW8 1320 aa14.48□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 PRDM10Q9NQV6 1147 aa14.48□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 KAT6BQ8WYB5 2073 aa14.47□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 NME9Q86XW9 330 aa14.47□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 CARD10Q9BWT7 1032 aa14.47□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 C16orf71Q8IYS4 520 aaPredicted RBP14.46□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
MIA-RAB4B-201ENST00000600729 FAM208AQ9UK61 1670 aaKnown RBP14.46□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.45□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 ERBB3P21860 1342 aa14.44□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 FOXN1O15353 648 aa14.44□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 KCNH5Q8NCM2 988 aa14.44□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 A0A1W2PP64 1363 aa14.44□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 PNPLA7Q6ZV29 1317 aa14.43□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 CCDC7Q96M83 1385 aa14.43□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 TNRC6CQ9HCJ0 1690 aaKnown RBP14.42□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 CSB-PGBD3P0DP91 1061 aa14.42□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 SLC12A5Q9H2X9 1139 aa14.42□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 EDC4Q6P2E9 1401 aaKnown RBP14.41□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 PKD1L3Q7Z443 1732 aa14.41□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 DOT1LQ8TEK3 1739 aa14.41□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 CDCA7Q9BWT1 371 aaPredicted RBP14.41□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 AKT1S1Q96B36 256 aa14.4□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 ACSBG1Q96GR2 724 aa14.4□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 CARD11Q9BXL7 1154 aa14.4□□□□□ -0.1
MIA-RAB4B-201ENST00000600729 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 C10orf71Q711Q0 1435 aa14.39□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 CUL9Q8IWT3 2517 aa14.39□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 LY75O60449 1722 aa14.38□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 CCDC85CA6NKD9 419 aa14.38□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 EXOC5O00471 708 aa14.38□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 FBLN1P23142 703 aa14.37□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 TMC1Q8TDI8 760 aa14.37□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 ANKRD24Q8TF21 1146 aa14.37□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 TESK2Q96S53 571 aa14.37□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 LRRC4BQ9NT99 713 aa14.37□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 NLRP2Q9NX02 1062 aa14.36□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 IL2RBP14784 551 aa14.35□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 CTCFP49711 727 aaPredicted RBP14.35□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 SMC1BQ8NDV3 1235 aa14.35□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 PXDNLA1KZ92 1463 aa14.35□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 IGSF1Q8N6C5 1336 aa14.35□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 MEGF6O75095 1541 aa14.35□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 KIF20BQ96Q89 1820 aa14.34□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 NSD2O96028 1365 aa14.34□□□□□ -0.11
MIA-RAB4B-201ENST00000600729 TONSLQ96HA7 1378 aa14.33□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 KCPQ6ZWJ8 1503 aa14.32□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 HDGFL2Q7Z4V5 671 aaPredicted RBP14.32□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 MAP3K19Q56UN5 1328 aa14.32□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 TOGARAM1Q9Y4F4 1720 aa14.32□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 ST20-MTHFSA0A0A6YYL1 179 aa14.31□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 IP6K1Q92551 441 aa14.31□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 LTV1Q96GA3 475 aaPredicted RBP14.31□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 TFCP2L1Q9NZI6 479 aa14.31□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 VIRMAQ69YN4 1812 aaKnown RBP14.31□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 LBX1P52954 281 aa14.3□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 KCNQ4P56696 695 aa14.3□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 TAF1LQ8IZX4 1826 aa14.29□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 HOXC9P31274 260 aa14.29□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 AIDAQ96BJ3 306 aa14.29□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 PUS7Q96PZ0 661 aaKnown RBP14.29□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 TERF2IPQ9NYB0 399 aa14.29□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 A0A0C4DFX4 3053 aa14.28□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 PLEKHG2Q9H7P9 1386 aa14.28□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 ITGB4P16144 1822 aa14.27□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 ANKRD26Q9UPS8 1709 aa14.27□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 C5P01031 1676 aa14.27□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 ANKRD36BQ8N2N9 1353 aa14.27□□□□□ -0.12
MIA-RAB4B-201ENST00000600729 DDX54Q8TDD1 881 aaKnown RBP14.27□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 MKRN1Q9UHC7 482 aaKnown RBP14.26□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 KIAA1551Q9HCM1 1747 aa14.26□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 N4BP2Q86UW6 1770 aaPredicted RBP14.25□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 KDM2BQ8NHM5 1336 aa14.25□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 RRS1Q15050 365 aaKnown RBP14.25□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 USHBP1Q8N6Y0 703 aa14.25□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 RRAGCQ9HB90 399 aa14.25□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 PRPF38BQ5VTL8 546 aaKnown RBP14.24□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 NBPF6Q5VWK0 638 aa14.24□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 NBPF4Q96M43 638 aa14.24□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 GGNBP2Q9H3C7 697 aa14.24□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 RTL1A6NKG5 1358 aa14.23□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 SBF1O95248 1867 aa14.23□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 BRCA1P38398 1863 aaKnown RBP14.23□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 FYB1O15117 783 aa14.23□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 MSH5O43196 834 aa14.23□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 PRIM1P49642 420 aaKnown RBP14.23□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 SLC27A3Q5K4L6 730 aa14.23□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 COG3Q96JB2 828 aa14.23□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 USP47Q96K76 1375 aa14.22□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 KIF13BQ9NQT8 1826 aa14.22□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 COL23A1Q86Y22 540 aaPredicted RBP14.22□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 CFAP44Q96MT7 982 aa14.22□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 MAP2P11137 1827 aaKnown RBP14.22□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 ARFGEF1Q9Y6D6 1849 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms