RNA–Protein interactions for RNA: ENST00000600166.1

CFTR-208, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 5

Gene CFTR, Length 559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-208ENST00000600166 ASXL1Q8IXJ9 1541 aa8.55□□□□□ -1.04
CFTR-208ENST00000600166 FAM135AQ9P2D6 1515 aa8.55□□□□□ -1.04
CFTR-208ENST00000600166 ST20-MTHFSA0A0A6YYL1 179 aa8.55□□□□□ -1.04
CFTR-208ENST00000600166 IGHDP01880 384 aa8.55□□□□□ -1.04
CFTR-208ENST00000600166 MAP3K9P80192 1104 aa8.55□□□□□ -1.04
CFTR-208ENST00000600166 PIBF1Q8WXW3 757 aa8.55□□□□□ -1.04
CFTR-208ENST00000600166 ANKRD7Q92527 254 aa8.55□□□□□ -1.04
CFTR-208ENST00000600166 KCNK17Q96T54 332 aa8.55□□□□□ -1.04
CFTR-208ENST00000600166 GZF1Q9H116 711 aaPredicted RBP8.55□□□□□ -1.04
CFTR-208ENST00000600166 NEURL4Q96JN8 1562 aa8.54□□□□□ -1.04
CFTR-208ENST00000600166 DPYSL4O14531 572 aa8.54□□□□□ -1.04
CFTR-208ENST00000600166 CTIFO43310 598 aaKnown RBP8.54□□□□□ -1.04
CFTR-208ENST00000600166 CDK11BP21127 795 aaKnown RBP8.54□□□□□ -1.04
CFTR-208ENST00000600166 CCDC27Q2M243 656 aa8.54□□□□□ -1.04
CFTR-208ENST00000600166 CTR9Q6PD62 1173 aa8.54□□□□□ -1.04
CFTR-208ENST00000600166 CHMP4BQ9H444 224 aaKnown RBP8.54□□□□□ -1.04
CFTR-208ENST00000600166 BCL2L12Q9HB09 334 aa8.54□□□□□ -1.04
CFTR-208ENST00000600166 CALCOCO1Q9P1Z2 691 aa8.54□□□□□ -1.04
CFTR-208ENST00000600166 CLTCL1P53675 1640 aa8.54□□□□□ -1.04
CFTR-208ENST00000600166 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
CFTR-208ENST00000600166 RAD50Q92878 1312 aa8.54□□□□□ -1.04
CFTR-208ENST00000600166 CFAP65Q6ZU64 1925 aaKnown RBP8.53□□□□□ -1.04
CFTR-208ENST00000600166 HRO43593 1189 aa8.53□□□□□ -1.04
CFTR-208ENST00000600166 PHF14O94880 888 aa8.53□□□□□ -1.04
CFTR-208ENST00000600166 TMF1P82094 1093 aa8.53□□□□□ -1.04
CFTR-208ENST00000600166 LRSAM1Q6UWE0 723 aa8.53□□□□□ -1.04
CFTR-208ENST00000600166 EFCC1Q9HA90 598 aa8.53□□□□□ -1.04
CFTR-208ENST00000600166 ADAMTS8Q9UP79 889 aa8.53□□□□□ -1.04
CFTR-208ENST00000600166 ATP10BO94823 1461 aa8.52□□□□□ -1.05
CFTR-208ENST00000600166 WDR7Q9Y4E6 1490 aa8.52□□□□□ -1.05
CFTR-208ENST00000600166 K7ELQ4 463 aaPredicted RBP8.52□□□□□ -1.05
CFTR-208ENST00000600166 TULP2O00295 520 aa8.52□□□□□ -1.05
CFTR-208ENST00000600166 CYP2E1P05181 493 aaPredicted RBP8.52□□□□□ -1.05
CFTR-208ENST00000600166 MMP14P50281 582 aa8.52□□□□□ -1.05
CFTR-208ENST00000600166 FKBP5Q13451 457 aaPredicted RBP8.52□□□□□ -1.05
CFTR-208ENST00000600166 PDIA6Q15084 440 aa8.52□□□□□ -1.05
CFTR-208ENST00000600166 AXDND1Q5T1B0 1012 aaPredicted RBP8.52□□□□□ -1.05
CFTR-208ENST00000600166 WDR63Q8IWG1 891 aa8.52□□□□□ -1.05
CFTR-208ENST00000600166 SYAP1Q96A49 352 aaPredicted RBP8.52□□□□□ -1.05
CFTR-208ENST00000600166 ZHX1Q9UKY1 873 aaPredicted RBP8.52□□□□□ -1.05
CFTR-208ENST00000600166 DDX49Q9Y6V7 483 aaKnown RBP8.52□□□□□ -1.05
CFTR-208ENST00000600166 ANKRD50Q9ULJ7 1429 aa8.52□□□□□ -1.05
CFTR-208ENST00000600166 ARHGEF5Q12774 1597 aa8.52□□□□□ -1.05
CFTR-208ENST00000600166 KIAA1210Q9ULL0 1709 aa8.51□□□□□ -1.05
CFTR-208ENST00000600166 PLA2R1Q13018 1463 aa8.51□□□□□ -1.05
CFTR-208ENST00000600166 POLR3AO14802 1390 aaPredicted RBP8.51□□□□□ -1.05
CFTR-208ENST00000600166 SPDYE16A6NNV3 312 aaPredicted RBP8.51□□□□□ -1.05
CFTR-208ENST00000600166 CHAF1AQ13111 956 aaPredicted RBP8.51□□□□□ -1.05
CFTR-208ENST00000600166 ZSCAN23Q3MJ62 389 aa8.51□□□□□ -1.05
CFTR-208ENST00000600166 BMP2KLQ5H9B9 411 aa8.51□□□□□ -1.05
CFTR-208ENST00000600166 TESK2Q96S53 571 aa8.51□□□□□ -1.05
CFTR-208ENST00000600166 ABCA8O94911 1581 aa8.51□□□□□ -1.05
CFTR-208ENST00000600166 IQGAP1P46940 1657 aa8.5□□□□□ -1.05
CFTR-208ENST00000600166 BAG4O95429 457 aaKnown RBP8.5□□□□□ -1.05
CFTR-208ENST00000600166 PPP2R1AP30153 589 aa8.5□□□□□ -1.05
CFTR-208ENST00000600166 MFAP1P55081 439 aaKnown RBP8.5□□□□□ -1.05
CFTR-208ENST00000600166 TIGD1Q96MW7 591 aa8.5□□□□□ -1.05
CFTR-208ENST00000600166 CFAP74Q9C0B2 1584 aa8.5□□□□□ -1.05
CFTR-208ENST00000600166 GEMIN8Q9NWZ8 242 aaKnown RBP8.5□□□□□ -1.05
CFTR-208ENST00000600166 USP25Q9UHP3 1055 aa8.5□□□□□ -1.05
CFTR-208ENST00000600166 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
CFTR-208ENST00000600166 MYOM2P54296 1465 aa8.5□□□□□ -1.05
CFTR-208ENST00000600166 CDK13Q14004 1512 aaKnown RBP8.49□□□□□ -1.05
CFTR-208ENST00000600166 PTPREP23469 700 aa8.49□□□□□ -1.05
CFTR-208ENST00000600166 CAVIN1Q6NZI2 390 aaKnown RBP8.49□□□□□ -1.05
CFTR-208ENST00000600166 ZDHHC16Q969W1 377 aa8.49□□□□□ -1.05
CFTR-208ENST00000600166 CGNQ9P2M7 1197 aaKnown RBP8.49□□□□□ -1.05
CFTR-208ENST00000600166 MORC2Q9Y6X9 1032 aaPredicted RBP8.49□□□□□ -1.05
CFTR-208ENST00000600166 RAPGEF6Q8TEU7 1601 aa8.49□□□□□ -1.05
CFTR-208ENST00000600166 NUP153P49790 1475 aaKnown RBP8.49□□□□□ -1.05
CFTR-208ENST00000600166 BRD2P25440 801 aaKnown RBP8.48□□□□□ -1.05
CFTR-208ENST00000600166 IRX3P78415 501 aaPredicted RBP8.48□□□□□ -1.05
CFTR-208ENST00000600166 XPCQ01831 940 aaPredicted RBP8.48□□□□□ -1.05
CFTR-208ENST00000600166 FAM69CQ0P6D2 419 aa8.48□□□□□ -1.05
CFTR-208ENST00000600166 RABEP1Q15276 862 aa8.48□□□□□ -1.05
CFTR-208ENST00000600166 DNTTIP2Q5QJE6 756 aaKnown RBP8.48□□□□□ -1.05
CFTR-208ENST00000600166 SKAP1Q86WV1 359 aa8.48□□□□□ -1.05
CFTR-208ENST00000600166 SLC4A5Q9BY07 1137 aa8.48□□□□□ -1.05
CFTR-208ENST00000600166 ADAM33Q9BZ11 813 aa8.48□□□□□ -1.05
CFTR-208ENST00000600166 LMBRD1Q9NUN5 540 aa8.48□□□□□ -1.05
CFTR-208ENST00000600166 BCCIPQ9P287 314 aaKnown RBP eCLIP8.48□□□□□ -1.05
CFTR-208ENST00000600166 VPS9D1Q9Y2B5 631 aa8.48□□□□□ -1.05
CFTR-208ENST00000600166 UNC13BO14795 1591 aa8.48□□□□□ -1.05
CFTR-208ENST00000600166 ANKRD36BQ8N2N9 1353 aa8.48□□□□□ -1.05
CFTR-208ENST00000600166 USP32Q8NFA0 1604 aa8.47□□□□□ -1.05
CFTR-208ENST00000600166 CLGNO14967 610 aa8.47□□□□□ -1.05
CFTR-208ENST00000600166 NOLC1Q14978 699 aaKnown RBP eCLIP8.47□□□□□ -1.05
CFTR-208ENST00000600166 SLFNL1Q499Z3 407 aa8.47□□□□□ -1.05
CFTR-208ENST00000600166 ZNF428Q96B54 188 aa8.47□□□□□ -1.05
CFTR-208ENST00000600166 ARID3AQ99856 593 aa8.47□□□□□ -1.05
CFTR-208ENST00000600166 DDX19BQ9UMR2 479 aa8.47□□□□□ -1.05
CFTR-208ENST00000600166 PCDHGA10Q9Y5H3 936 aa8.47□□□□□ -1.05
CFTR-208ENST00000600166 TROQ12816 1431 aaPredicted RBP8.46□□□□□ -1.05
CFTR-208ENST00000600166 IQSEC2Q5JU85 1478 aa8.46□□□□□ -1.05
CFTR-208ENST00000600166 SEMA3EO15041 775 aa8.46□□□□□ -1.06
CFTR-208ENST00000600166 RARSP54136 660 aaKnown RBP8.46□□□□□ -1.06
CFTR-208ENST00000600166 MVPQ14764 893 aaKnown RBP8.46□□□□□ -1.06
CFTR-208ENST00000600166 RNF20Q5VTR2 975 aa8.46□□□□□ -1.06
CFTR-208ENST00000600166 FAM53CQ9NYF3 392 aa8.46□□□□□ -1.06
CFTR-208ENST00000600166 DDX41Q9UJV9 622 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms