RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 PLSCR1O15162 318 aa16.52■□□□□ 0.24
TMEM38A-203ENST00000599479 APBA3O96018 575 aa16.52■□□□□ 0.24
TMEM38A-203ENST00000599479 EN1Q05925 392 aaPredicted RBP16.52■□□□□ 0.24
TMEM38A-203ENST00000599479 DDX54Q8TDD1 881 aaKnown RBP16.51■□□□□ 0.23
TMEM38A-203ENST00000599479 CYP27B1O15528 508 aa16.5■□□□□ 0.23
TMEM38A-203ENST00000599479 KCNQ2O43526 872 aa16.5■□□□□ 0.23
TMEM38A-203ENST00000599479 KDRP35968 1356 aa16.5■□□□□ 0.23
TMEM38A-203ENST00000599479 PARD3Q8TEW0 1356 aa16.5■□□□□ 0.23
TMEM38A-203ENST00000599479 RGPD1P0DJD0 1748 aa16.49■□□□□ 0.23
TMEM38A-203ENST00000599479 NKX1-1Q15270 411 aaPredicted RBP16.49■□□□□ 0.23
TMEM38A-203ENST00000599479 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
TMEM38A-203ENST00000599479 PPP2R1AP30153 589 aa16.48■□□□□ 0.23
TMEM38A-203ENST00000599479 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
TMEM38A-203ENST00000599479 EZH2Q15910 746 aaKnown RBP16.48■□□□□ 0.23
TMEM38A-203ENST00000599479 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
TMEM38A-203ENST00000599479 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
TMEM38A-203ENST00000599479 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
TMEM38A-203ENST00000599479 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
TMEM38A-203ENST00000599479 PROM2Q8N271 834 aa16.46■□□□□ 0.23
TMEM38A-203ENST00000599479 SPG7Q9UQ90 795 aa16.46■□□□□ 0.23
TMEM38A-203ENST00000599479 SBF2Q86WG5 1849 aa16.46■□□□□ 0.23
TMEM38A-203ENST00000599479 COL3A1P02461 1466 aaPredicted RBP16.46■□□□□ 0.23
TMEM38A-203ENST00000599479 CNGB1Q14028 1251 aaPredicted RBP16.45■□□□□ 0.22
TMEM38A-203ENST00000599479 SULT6B1Q6IMI4 303 aa16.45■□□□□ 0.22
TMEM38A-203ENST00000599479 ACSBG1Q96GR2 724 aa16.45■□□□□ 0.22
TMEM38A-203ENST00000599479 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
TMEM38A-203ENST00000599479 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
TMEM38A-203ENST00000599479 PHKG2P15735 406 aa16.43■□□□□ 0.22
TMEM38A-203ENST00000599479 AMOTQ4VCS5 1084 aa16.43■□□□□ 0.22
TMEM38A-203ENST00000599479 RALBP1Q15311 655 aa16.42■□□□□ 0.22
TMEM38A-203ENST00000599479 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
TMEM38A-203ENST00000599479 IFNL2Q8IZJ0 200 aa16.42■□□□□ 0.22
TMEM38A-203ENST00000599479 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
TMEM38A-203ENST00000599479 NHSQ6T4R5 1651 aa16.4■□□□□ 0.22
TMEM38A-203ENST00000599479 CFAP53Q96M91 514 aa16.4■□□□□ 0.22
TMEM38A-203ENST00000599479 SRCAPQ6ZRS2 3230 aa16.39■□□□□ 0.21
TMEM38A-203ENST00000599479 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
TMEM38A-203ENST00000599479 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
TMEM38A-203ENST00000599479 HMOX1P09601 288 aa16.38■□□□□ 0.21
TMEM38A-203ENST00000599479 RGPD3A6NKT7 1758 aaPredicted RBP16.38■□□□□ 0.21
TMEM38A-203ENST00000599479 RGPD4Q7Z3J3 1758 aa16.38■□□□□ 0.21
TMEM38A-203ENST00000599479 HSP90AB1P08238 724 aaKnown RBP16.37■□□□□ 0.21
TMEM38A-203ENST00000599479 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
TMEM38A-203ENST00000599479 SYTL4Q96C24 671 aaPredicted RBP16.36■□□□□ 0.21
TMEM38A-203ENST00000599479 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
TMEM38A-203ENST00000599479 RREB1Q92766 1687 aa16.35■□□□□ 0.21
TMEM38A-203ENST00000599479 ERVV-2B6SEH9 535 aa16.35■□□□□ 0.21
TMEM38A-203ENST00000599479 U2SURPO15042 1029 aaKnown RBP16.35■□□□□ 0.21
TMEM38A-203ENST00000599479 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
TMEM38A-203ENST00000599479 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
TMEM38A-203ENST00000599479 PIGBQ92521 554 aa16.35■□□□□ 0.21
TMEM38A-203ENST00000599479 FCHSD2O94868 740 aa16.34■□□□□ 0.21
TMEM38A-203ENST00000599479 MTHFSDQ2M296 383 aaKnown RBP16.34■□□□□ 0.21
TMEM38A-203ENST00000599479 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
TMEM38A-203ENST00000599479 NBPF14Q5TI25 921 aa16.34■□□□□ 0.21
TMEM38A-203ENST00000599479 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
TMEM38A-203ENST00000599479 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
TMEM38A-203ENST00000599479 LRRC4BQ9NT99 713 aa16.34■□□□□ 0.21
TMEM38A-203ENST00000599479 MPRIPQ6WCQ1 1025 aa16.33■□□□□ 0.2
TMEM38A-203ENST00000599479 BTAF1O14981 1849 aa16.33■□□□□ 0.2
TMEM38A-203ENST00000599479 KDM6AO15550 1401 aaPredicted RBP16.32■□□□□ 0.2
TMEM38A-203ENST00000599479 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
TMEM38A-203ENST00000599479 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
TMEM38A-203ENST00000599479 DOT1LQ8TEK3 1739 aa16.31■□□□□ 0.2
TMEM38A-203ENST00000599479 MYBBP1AQ9BQG0 1328 aaKnown RBP16.31■□□□□ 0.2
TMEM38A-203ENST00000599479 C1orf141Q5JVX7 400 aa16.31■□□□□ 0.2
TMEM38A-203ENST00000599479 SMARCC1Q92922 1105 aaPredicted RBP16.31■□□□□ 0.2
TMEM38A-203ENST00000599479 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
TMEM38A-203ENST00000599479 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
TMEM38A-203ENST00000599479 U2AF1L5P0DN76 240 aaPredicted RBP16.3■□□□□ 0.2
TMEM38A-203ENST00000599479 U2AF1Q01081 240 aaKnown RBP eCLIP16.3■□□□□ 0.2
TMEM38A-203ENST00000599479 TMOD3Q9NYL9 352 aa16.3■□□□□ 0.2
TMEM38A-203ENST00000599479 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
TMEM38A-203ENST00000599479 PSDA5PKW4 1024 aaPredicted RBP16.29■□□□□ 0.2
TMEM38A-203ENST00000599479 PRKAR2BP31323 418 aa16.29■□□□□ 0.2
TMEM38A-203ENST00000599479 SLC15A2Q16348 729 aa16.29■□□□□ 0.2
TMEM38A-203ENST00000599479 ATG3Q9NT62 314 aa16.29■□□□□ 0.2
TMEM38A-203ENST00000599479 KAT6BQ8WYB5 2073 aa16.29■□□□□ 0.2
TMEM38A-203ENST00000599479 GAS2L2Q8NHY3 880 aa16.28■□□□□ 0.2
TMEM38A-203ENST00000599479 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
TMEM38A-203ENST00000599479 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
TMEM38A-203ENST00000599479 ASAP1Q9ULH1 1129 aa16.28■□□□□ 0.2
TMEM38A-203ENST00000599479 PALLDQ8WX93 1383 aa16.27■□□□□ 0.2
TMEM38A-203ENST00000599479 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
TMEM38A-203ENST00000599479 HMGB2P26583 209 aaKnown RBP16.27■□□□□ 0.2
TMEM38A-203ENST00000599479 CABP4P57796 275 aa16.27■□□□□ 0.2
TMEM38A-203ENST00000599479 NFATC2IPQ8NCF5 419 aa16.27■□□□□ 0.2
TMEM38A-203ENST00000599479 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
TMEM38A-203ENST00000599479 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
TMEM38A-203ENST00000599479 CCNL1Q9UK58 526 aaPredicted RBP16.26■□□□□ 0.19
TMEM38A-203ENST00000599479 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
TMEM38A-203ENST00000599479 LY75O60449 1722 aa16.25■□□□□ 0.19
TMEM38A-203ENST00000599479 ITGB4P16144 1822 aa16.25■□□□□ 0.19
TMEM38A-203ENST00000599479 GNAT3A8MTJ3 354 aa16.25■□□□□ 0.19
TMEM38A-203ENST00000599479 KCNQ4P56696 695 aa16.25■□□□□ 0.19
TMEM38A-203ENST00000599479 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
TMEM38A-203ENST00000599479 STK32BQ9NY57 414 aa16.25■□□□□ 0.19
TMEM38A-203ENST00000599479 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
TMEM38A-203ENST00000599479 SIK1P57059 783 aa16.24■□□□□ 0.19
TMEM38A-203ENST00000599479 ZNF827Q17R98 1081 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms