RNA–Protein interactions for RNA: ENST00000598706.1

RAB11B-203, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB11B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-203ENST00000598706 ANKRD24Q8TF21 1146 aa20.35■□□□□ 0.85
RAB11B-203ENST00000598706 CCNL1Q9UK58 526 aaPredicted RBP20.35■□□□□ 0.85
RAB11B-203ENST00000598706 FAM208AQ9UK61 1670 aaKnown RBP20.34■□□□□ 0.85
RAB11B-203ENST00000598706 KTN1Q86UP2 1357 aaKnown RBP20.34■□□□□ 0.85
RAB11B-203ENST00000598706 C5P01031 1676 aa20.33■□□□□ 0.85
RAB11B-203ENST00000598706 PRIM1P49642 420 aaKnown RBP20.33■□□□□ 0.85
RAB11B-203ENST00000598706 WDR90Q96KV7 1748 aa20.32■□□□□ 0.84
RAB11B-203ENST00000598706 USP31Q70CQ4 1352 aa20.32■□□□□ 0.84
RAB11B-203ENST00000598706 IGSF1Q8N6C5 1336 aa20.29■□□□□ 0.84
RAB11B-203ENST00000598706 CICQ96RK0 1608 aaPredicted RBP20.29■□□□□ 0.84
RAB11B-203ENST00000598706 CAPN15O75808 1086 aa20.29■□□□□ 0.84
RAB11B-203ENST00000598706 COL13A1Q5TAT6 717 aaPredicted RBP20.29■□□□□ 0.84
RAB11B-203ENST00000598706 TAF1LQ8IZX4 1826 aa20.29■□□□□ 0.84
RAB11B-203ENST00000598706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.28■□□□□ 0.84
RAB11B-203ENST00000598706 WWC3Q9ULE0 1092 aa20.28■□□□□ 0.84
RAB11B-203ENST00000598706 USP47Q96K76 1375 aa20.27■□□□□ 0.84
RAB11B-203ENST00000598706 TOMM70O94826 608 aa20.27■□□□□ 0.84
RAB11B-203ENST00000598706 FLAD1Q8NFF5 587 aa20.25■□□□□ 0.83
RAB11B-203ENST00000598706 NME9Q86XW9 330 aa20.24■□□□□ 0.83
RAB11B-203ENST00000598706 PCNTO95613 3336 aa20.22■□□□□ 0.83
RAB11B-203ENST00000598706 TOGARAM1Q9Y4F4 1720 aa20.22■□□□□ 0.83
RAB11B-203ENST00000598706 SBNO2Q9Y2G9 1366 aa20.21■□□□□ 0.83
RAB11B-203ENST00000598706 RGPD2P0DJD1 1756 aa20.21■□□□□ 0.83
RAB11B-203ENST00000598706 PRELPP51888 382 aa20.21■□□□□ 0.83
RAB11B-203ENST00000598706 TNS4Q8IZW8 715 aa20.21■□□□□ 0.83
RAB11B-203ENST00000598706 KLRG1Q96E93 195 aa20.21■□□□□ 0.83
RAB11B-203ENST00000598706 C4BP0C0L5 1744 aa20.21■□□□□ 0.83
RAB11B-203ENST00000598706 UBR3Q6ZT12 1888 aa20.2■□□□□ 0.82
RAB11B-203ENST00000598706 JMYQ8N9B5 988 aa20.2■□□□□ 0.82
RAB11B-203ENST00000598706 ZCRB1Q8TBF4 217 aaKnown RBP20.2■□□□□ 0.82
RAB11B-203ENST00000598706 LTV1Q96GA3 475 aaPredicted RBP20.2■□□□□ 0.82
RAB11B-203ENST00000598706 MEGF6O75095 1541 aa20.2■□□□□ 0.82
RAB11B-203ENST00000598706 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
RAB11B-203ENST00000598706 IP6K1Q92551 441 aa20.19■□□□□ 0.82
RAB11B-203ENST00000598706 HMGB2P26583 209 aaKnown RBP20.18■□□□□ 0.82
RAB11B-203ENST00000598706 HTRA3P83110 453 aa20.17■□□□□ 0.82
RAB11B-203ENST00000598706 NMRK2Q9NPI5 230 aa20.17■□□□□ 0.82
RAB11B-203ENST00000598706 PALLDQ8WX93 1383 aa20.16■□□□□ 0.82
RAB11B-203ENST00000598706 RBM46Q8TBY0 533 aaKnown RBP20.15■□□□□ 0.82
RAB11B-203ENST00000598706 KIAA1551Q9HCM1 1747 aa20.15■□□□□ 0.82
RAB11B-203ENST00000598706 KIF13BQ9NQT8 1826 aa20.15■□□□□ 0.82
RAB11B-203ENST00000598706 EDC4Q6P2E9 1401 aaKnown RBP20.14■□□□□ 0.81
RAB11B-203ENST00000598706 NSD3Q9BZ95 1437 aa20.14■□□□□ 0.81
RAB11B-203ENST00000598706 AMIGO3Q86WK7 504 aa20.14■□□□□ 0.81
RAB11B-203ENST00000598706 AK7Q96M32 723 aa20.14■□□□□ 0.81
RAB11B-203ENST00000598706 N4BP2Q86UW6 1770 aaPredicted RBP20.13■□□□□ 0.81
RAB11B-203ENST00000598706 PHF14O94880 888 aa20.13■□□□□ 0.81
RAB11B-203ENST00000598706 PXDNLA1KZ92 1463 aa20.12■□□□□ 0.81
RAB11B-203ENST00000598706 ITGB4P16144 1822 aa20.11■□□□□ 0.81
RAB11B-203ENST00000598706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.1■□□□□ 0.81
RAB11B-203ENST00000598706 SMIM5Q71RC9 77 aa20.1■□□□□ 0.81
RAB11B-203ENST00000598706 HDGFL2Q7Z4V5 671 aaPredicted RBP20.1■□□□□ 0.81
RAB11B-203ENST00000598706 C16orf71Q8IYS4 520 aaPredicted RBP20.1■□□□□ 0.81
RAB11B-203ENST00000598706 ROCK2O75116 1388 aaKnown RBP20.09■□□□□ 0.81
RAB11B-203ENST00000598706 HOXC9P31274 260 aa20.09■□□□□ 0.81
RAB11B-203ENST00000598706 FSTL1Q12841 308 aa20.09■□□□□ 0.81
RAB11B-203ENST00000598706 CGNL1Q0VF96 1302 aa20.08■□□□□ 0.81
RAB11B-203ENST00000598706 PKD1L3Q7Z443 1732 aa20.08■□□□□ 0.81
RAB11B-203ENST00000598706 SSFA2P28290 1259 aa20.08■□□□□ 0.81
RAB11B-203ENST00000598706 TMC1Q8TDI8 760 aa20.08■□□□□ 0.81
RAB11B-203ENST00000598706 BCS1LQ9Y276 419 aa20.08■□□□□ 0.81
RAB11B-203ENST00000598706 BRCA1P38398 1863 aaKnown RBP20.07■□□□□ 0.8
RAB11B-203ENST00000598706 MAP3K19Q56UN5 1328 aa20.07■□□□□ 0.8
RAB11B-203ENST00000598706 A0A1W2PP64 1363 aa20.07■□□□□ 0.8
RAB11B-203ENST00000598706 PLEKHG2Q9H7P9 1386 aa20.07■□□□□ 0.8
RAB11B-203ENST00000598706 MPRIPQ6WCQ1 1025 aa20.06■□□□□ 0.8
RAB11B-203ENST00000598706 ARHGAP27Q6ZUM4 889 aa20.06■□□□□ 0.8
RAB11B-203ENST00000598706 MAP2P11137 1827 aaKnown RBP20.06■□□□□ 0.8
RAB11B-203ENST00000598706 AMPHP49418 695 aa20.05■□□□□ 0.8
RAB11B-203ENST00000598706 PCDH11XQ9BZA7 1347 aa20.04■□□□□ 0.8
RAB11B-203ENST00000598706 PCDH11YQ9BZA8 1340 aa20.04■□□□□ 0.8
RAB11B-203ENST00000598706 TNRC6CQ9HCJ0 1690 aaKnown RBP20.04■□□□□ 0.8
RAB11B-203ENST00000598706 RAPGEF4Q8WZA2 1011 aa20.04■□□□□ 0.8
RAB11B-203ENST00000598706 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
RAB11B-203ENST00000598706 SLC12A5Q9H2X9 1139 aa20.04■□□□□ 0.8
RAB11B-203ENST00000598706 ARFGEF1Q9Y6D6 1849 aa20.04■□□□□ 0.8
RAB11B-203ENST00000598706 KCPQ6ZWJ8 1503 aa20.03■□□□□ 0.8
RAB11B-203ENST00000598706 MMP10P09238 476 aa20.03■□□□□ 0.8
RAB11B-203ENST00000598706 TGFB2P61812 414 aa20.03■□□□□ 0.8
RAB11B-203ENST00000598706 NBPF6Q5VWK0 638 aa20.03■□□□□ 0.8
RAB11B-203ENST00000598706 USHBP1Q8N6Y0 703 aa20.03■□□□□ 0.8
RAB11B-203ENST00000598706 L3MBTL2Q969R5 705 aa20.03■□□□□ 0.8
RAB11B-203ENST00000598706 NBPF4Q96M43 638 aa20.03■□□□□ 0.8
RAB11B-203ENST00000598706 TERF2IPQ9NYB0 399 aa20.03■□□□□ 0.8
RAB11B-203ENST00000598706 C10orf71Q711Q0 1435 aa20.02■□□□□ 0.8
RAB11B-203ENST00000598706 A0A0G2JLW4 131 aa20.02■□□□□ 0.8
RAB11B-203ENST00000598706 RTL1A6NKG5 1358 aa20.02■□□□□ 0.8
RAB11B-203ENST00000598706 TATP17735 454 aaPredicted RBP20.01■□□□□ 0.79
RAB11B-203ENST00000598706 C9orf131Q5VYM1 1079 aa20.01■□□□□ 0.79
RAB11B-203ENST00000598706 KDM2BQ8NHM5 1336 aa20.01■□□□□ 0.79
RAB11B-203ENST00000598706 HSPA1AP0DMV8 641 aaKnown RBP20■□□□□ 0.79
RAB11B-203ENST00000598706 HSPA1BP0DMV9 641 aaKnown RBP20■□□□□ 0.79
RAB11B-203ENST00000598706 FBLN1P23142 703 aa20■□□□□ 0.79
RAB11B-203ENST00000598706 LINC00116Q8NCU8 138 aa20■□□□□ 0.79
RAB11B-203ENST00000598706 COG3Q96JB2 828 aa20■□□□□ 0.79
RAB11B-203ENST00000598706 SMG6Q86US8 1419 aaKnown RBP20■□□□□ 0.79
RAB11B-203ENST00000598706 GNPATO15228 680 aa19.99■□□□□ 0.79
RAB11B-203ENST00000598706 FCHSD2O94868 740 aa19.99■□□□□ 0.79
RAB11B-203ENST00000598706 C4AP0C0L4 1744 aa19.97■□□□□ 0.79
RAB11B-203ENST00000598706 LOC102724428A0A0B4J2F2 783 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms