RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
SYMPK-210ENST00000598329 IL13P35225 146 aa17.04■□□□□ 0.32
SYMPK-210ENST00000598329 MTHFSP49914 203 aa17.04■□□□□ 0.32
SYMPK-210ENST00000598329 SBF2Q86WG5 1849 aa17.03■□□□□ 0.32
SYMPK-210ENST00000598329 APBA3O96018 575 aa17.02■□□□□ 0.32
SYMPK-210ENST00000598329 EN1Q05925 392 aaPredicted RBP17.02■□□□□ 0.32
SYMPK-210ENST00000598329 KDRP35968 1356 aa17.02■□□□□ 0.31
SYMPK-210ENST00000598329 PTF1AQ7RTS3 328 aa17.01■□□□□ 0.31
SYMPK-210ENST00000598329 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
SYMPK-210ENST00000598329 PCDH11XQ9BZA7 1347 aa16.99■□□□□ 0.31
SYMPK-210ENST00000598329 PCDH11YQ9BZA8 1340 aa16.99■□□□□ 0.31
SYMPK-210ENST00000598329 SHANK3Q9BYB0 1731 aa16.99■□□□□ 0.31
SYMPK-210ENST00000598329 CYP27B1O15528 508 aa16.99■□□□□ 0.31
SYMPK-210ENST00000598329 KCNQ2O43526 872 aa16.99■□□□□ 0.31
SYMPK-210ENST00000598329 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
SYMPK-210ENST00000598329 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
SYMPK-210ENST00000598329 COL3A1P02461 1466 aaPredicted RBP16.98■□□□□ 0.31
SYMPK-210ENST00000598329 RGPD3A6NKT7 1758 aaPredicted RBP16.97■□□□□ 0.31
SYMPK-210ENST00000598329 RGPD4Q7Z3J3 1758 aa16.97■□□□□ 0.31
SYMPK-210ENST00000598329 PKD1L3Q7Z443 1732 aa16.97■□□□□ 0.31
SYMPK-210ENST00000598329 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
SYMPK-210ENST00000598329 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
SYMPK-210ENST00000598329 PPP2R1AP30153 589 aa16.96■□□□□ 0.31
SYMPK-210ENST00000598329 PROM2Q8N271 834 aa16.96■□□□□ 0.31
SYMPK-210ENST00000598329 NHSQ6T4R5 1651 aa16.96■□□□□ 0.31
SYMPK-210ENST00000598329 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
SYMPK-210ENST00000598329 AMOTQ4VCS5 1084 aa16.94■□□□□ 0.3
SYMPK-210ENST00000598329 ACSBG1Q96GR2 724 aa16.94■□□□□ 0.3
SYMPK-210ENST00000598329 SULT6B1Q6IMI4 303 aa16.93■□□□□ 0.3
SYMPK-210ENST00000598329 AEBP1Q8IUX7 1158 aa16.93■□□□□ 0.3
SYMPK-210ENST00000598329 RREB1Q92766 1687 aa16.92■□□□□ 0.3
SYMPK-210ENST00000598329 PHKG2P15735 406 aa16.92■□□□□ 0.3
SYMPK-210ENST00000598329 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
SYMPK-210ENST00000598329 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
SYMPK-210ENST00000598329 PLEKHO1Q53GL0 409 aaPredicted RBP16.92■□□□□ 0.3
SYMPK-210ENST00000598329 IFNL2Q8IZJ0 200 aa16.92■□□□□ 0.3
SYMPK-210ENST00000598329 RALBP1Q15311 655 aa16.9■□□□□ 0.3
SYMPK-210ENST00000598329 TXNRD1Q16881 649 aa16.89■□□□□ 0.29
SYMPK-210ENST00000598329 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
SYMPK-210ENST00000598329 BTAF1O14981 1849 aa16.87■□□□□ 0.29
SYMPK-210ENST00000598329 HSP90AB1P08238 724 aaKnown RBP16.87■□□□□ 0.29
SYMPK-210ENST00000598329 SLC27A3Q5K4L6 730 aa16.87■□□□□ 0.29
SYMPK-210ENST00000598329 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
SYMPK-210ENST00000598329 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
SYMPK-210ENST00000598329 ERVV-2B6SEH9 535 aa16.86■□□□□ 0.29
SYMPK-210ENST00000598329 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
SYMPK-210ENST00000598329 DOT1LQ8TEK3 1739 aa16.85■□□□□ 0.29
SYMPK-210ENST00000598329 HMOX1P09601 288 aa16.85■□□□□ 0.29
SYMPK-210ENST00000598329 NBPF14Q5TI25 921 aa16.85■□□□□ 0.29
SYMPK-210ENST00000598329 PIGBQ92521 554 aa16.85■□□□□ 0.29
SYMPK-210ENST00000598329 LRRC4BQ9NT99 713 aa16.85■□□□□ 0.29
SYMPK-210ENST00000598329 ZNF316A6NFI3 1004 aaPredicted RBP16.84■□□□□ 0.29
SYMPK-210ENST00000598329 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
SYMPK-210ENST00000598329 SYTL4Q96C24 671 aaPredicted RBP16.84■□□□□ 0.29
SYMPK-210ENST00000598329 NUDCQ9Y266 331 aa16.84■□□□□ 0.29
SYMPK-210ENST00000598329 TOGARAM1Q9Y4F4 1720 aa16.84■□□□□ 0.29
SYMPK-210ENST00000598329 KDM6AO15550 1401 aaPredicted RBP16.83■□□□□ 0.28
SYMPK-210ENST00000598329 FCHSD2O94868 740 aa16.83■□□□□ 0.28
SYMPK-210ENST00000598329 AKAP4Q5JQC9 854 aa16.83■□□□□ 0.28
SYMPK-210ENST00000598329 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
SYMPK-210ENST00000598329 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.28
SYMPK-210ENST00000598329 KAT6BQ8WYB5 2073 aa16.82■□□□□ 0.28
SYMPK-210ENST00000598329 R3HDM1Q15032 1099 aaKnown RBP16.82■□□□□ 0.28
SYMPK-210ENST00000598329 SMARCC1Q92922 1105 aaPredicted RBP16.82■□□□□ 0.28
SYMPK-210ENST00000598329 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
SYMPK-210ENST00000598329 U2SURPO15042 1029 aaKnown RBP16.81■□□□□ 0.28
SYMPK-210ENST00000598329 MTHFSDQ2M296 383 aaKnown RBP16.81■□□□□ 0.28
SYMPK-210ENST00000598329 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
SYMPK-210ENST00000598329 MPRIPQ6WCQ1 1025 aa16.81■□□□□ 0.28
SYMPK-210ENST00000598329 MYBBP1AQ9BQG0 1328 aaKnown RBP16.8■□□□□ 0.28
SYMPK-210ENST00000598329 LY75O60449 1722 aa16.8■□□□□ 0.28
SYMPK-210ENST00000598329 HMGB2P26583 209 aaKnown RBP16.8■□□□□ 0.28
SYMPK-210ENST00000598329 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
SYMPK-210ENST00000598329 AKT1S1Q96B36 256 aa16.8■□□□□ 0.28
SYMPK-210ENST00000598329 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
SYMPK-210ENST00000598329 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
SYMPK-210ENST00000598329 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
SYMPK-210ENST00000598329 ITGB4P16144 1822 aa16.79■□□□□ 0.28
SYMPK-210ENST00000598329 ADAMTS7Q9UKP4 1686 aa16.78■□□□□ 0.28
SYMPK-210ENST00000598329 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
SYMPK-210ENST00000598329 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
SYMPK-210ENST00000598329 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
SYMPK-210ENST00000598329 ATG3Q9NT62 314 aa16.78■□□□□ 0.28
SYMPK-210ENST00000598329 U2AF1L5P0DN76 240 aaPredicted RBP16.77■□□□□ 0.28
SYMPK-210ENST00000598329 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
SYMPK-210ENST00000598329 U2AF1Q01081 240 aaKnown RBP eCLIP16.77■□□□□ 0.28
SYMPK-210ENST00000598329 STK32BQ9NY57 414 aa16.77■□□□□ 0.28
SYMPK-210ENST00000598329 ASAP1Q9ULH1 1129 aa16.77■□□□□ 0.28
SYMPK-210ENST00000598329 MRC1P22897 1456 aa16.76■□□□□ 0.27
SYMPK-210ENST00000598329 RNMTO43148 476 aaKnown RBP16.76■□□□□ 0.27
SYMPK-210ENST00000598329 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
SYMPK-210ENST00000598329 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
SYMPK-210ENST00000598329 PLEKHF1Q96S99 279 aa16.75■□□□□ 0.27
SYMPK-210ENST00000598329 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
SYMPK-210ENST00000598329 LOC102724428A0A0B4J2F2 783 aa16.74■□□□□ 0.27
SYMPK-210ENST00000598329 SIK1P57059 783 aa16.74■□□□□ 0.27
SYMPK-210ENST00000598329 CABP4P57796 275 aa16.74■□□□□ 0.27
SYMPK-210ENST00000598329 ZNF827Q17R98 1081 aa16.74■□□□□ 0.27
SYMPK-210ENST00000598329 NFATC2IPQ8NCF5 419 aa16.74■□□□□ 0.27
SYMPK-210ENST00000598329 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms