RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 NOB1Q9ULX3 412 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-216ENST00000598201 TCERG1O14776 1098 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-216ENST00000598201 DZIP1LQ8IYY4 767 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-216ENST00000598201 PLEKHG5O94827 1062 aa21.85■■□□□ 1.09
SHKBP1-216ENST00000598201 IGHDP01880 384 aa21.85■■□□□ 1.09
SHKBP1-216ENST00000598201 ALDH1L2Q3SY69 923 aa21.85■■□□□ 1.09
SHKBP1-216ENST00000598201 RTL1A6NKG5 1358 aa21.85■■□□□ 1.09
SHKBP1-216ENST00000598201 LTN1O94822 1766 aa21.84■■□□□ 1.09
SHKBP1-216ENST00000598201 ELL2O00472 640 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-216ENST00000598201 ATF7IPQ6VMQ6 1270 aa21.84■■□□□ 1.09
SHKBP1-216ENST00000598201 C8orf58Q8NAV2 365 aa21.84■■□□□ 1.09
SHKBP1-216ENST00000598201 MVPQ14764 893 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-216ENST00000598201 FTSJ3Q8IY81 847 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-216ENST00000598201 IP6K1Q92551 441 aa21.83■■□□□ 1.09
SHKBP1-216ENST00000598201 ZNF428Q96B54 188 aa21.83■■□□□ 1.08
SHKBP1-216ENST00000598201 KCNH5Q8NCM2 988 aa21.82■■□□□ 1.08
SHKBP1-216ENST00000598201 CABLES1Q8TDN4 633 aa21.82■■□□□ 1.08
SHKBP1-216ENST00000598201 KIF16BQ96L93 1317 aa21.81■■□□□ 1.08
SHKBP1-216ENST00000598201 TWISTNBQ3B726 338 aaPredicted RBP21.81■■□□□ 1.08
SHKBP1-216ENST00000598201 PCDHB15Q9Y5E8 787 aa21.81■■□□□ 1.08
SHKBP1-216ENST00000598201 CHL1O00533 1208 aa21.8■■□□□ 1.08
SHKBP1-216ENST00000598201 MS4A1P11836 297 aa21.8■■□□□ 1.08
SHKBP1-216ENST00000598201 BRPF1P55201 1214 aaPredicted RBP21.8■■□□□ 1.08
SHKBP1-216ENST00000598201 CRB1P82279 1406 aa21.8■■□□□ 1.08
SHKBP1-216ENST00000598201 ZBTB7CA1YPR0 619 aa21.79■■□□□ 1.08
SHKBP1-216ENST00000598201 GCP02774 474 aa21.79■■□□□ 1.08
SHKBP1-216ENST00000598201 AAMPQ13685 434 aa21.79■■□□□ 1.08
SHKBP1-216ENST00000598201 MRPL50Q8N5N7 158 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-216ENST00000598201 USHBP1Q8N6Y0 703 aa21.79■■□□□ 1.08
SHKBP1-216ENST00000598201 SLIT3O75094 1523 aa21.79■■□□□ 1.08
SHKBP1-216ENST00000598201 COL22A1Q8NFW1 1626 aaPredicted RBP21.79■■□□□ 1.08
SHKBP1-216ENST00000598201 USP19O94966 1318 aa21.78■■□□□ 1.08
SHKBP1-216ENST00000598201 SPATA31A6Q5VVP1 1343 aa21.78■■□□□ 1.08
SHKBP1-216ENST00000598201 IPO8O15397 1037 aaKnown RBP21.78■■□□□ 1.08
SHKBP1-216ENST00000598201 HAP1P54257 671 aaPredicted RBP21.78■■□□□ 1.08
SHKBP1-216ENST00000598201 GAS2L2Q8NHY3 880 aa21.78■■□□□ 1.08
SHKBP1-216ENST00000598201 NUTM2BA6NNL0 878 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-216ENST00000598201 NUTM2EB1AL46 878 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-216ENST00000598201 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
SHKBP1-216ENST00000598201 NUTM2AQ8IVF1 878 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-216ENST00000598201 TMEM57Q8N5G2 664 aa21.77■■□□□ 1.08
SHKBP1-216ENST00000598201 MED1Q15648 1581 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-216ENST00000598201 ARHGEF25Q86VW2 580 aa21.76■■□□□ 1.07
SHKBP1-216ENST00000598201 NBPF6Q5VWK0 638 aa21.76■■□□□ 1.07
SHKBP1-216ENST00000598201 ITPRIPQ8IWB1 547 aa21.76■■□□□ 1.07
SHKBP1-216ENST00000598201 NBPF4Q96M43 638 aa21.76■■□□□ 1.07
SHKBP1-216ENST00000598201 PHRF1Q9P1Y6 1649 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-216ENST00000598201 RTF1Q92541 710 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-216ENST00000598201 MIS18AQ9NYP9 233 aa21.75■■□□□ 1.07
SHKBP1-216ENST00000598201 PDE4AP27815 886 aa21.73■■□□□ 1.07
SHKBP1-216ENST00000598201 DDX19BQ9UMR2 479 aa21.73■■□□□ 1.07
SHKBP1-216ENST00000598201 CRYBG1Q9Y4K1 1723 aa21.72■■□□□ 1.07
SHKBP1-216ENST00000598201 GNAT3A8MTJ3 354 aa21.71■■□□□ 1.07
SHKBP1-216ENST00000598201 ADAMTS2O95450 1211 aa21.71■■□□□ 1.07
SHKBP1-216ENST00000598201 ZC3H6P61129 1189 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-216ENST00000598201 ARHGAP45Q92619 1136 aa21.71■■□□□ 1.07
SHKBP1-216ENST00000598201 KIAA0232Q92628 1395 aa21.71■■□□□ 1.07
SHKBP1-216ENST00000598201 HTATSF1O43719 755 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-216ENST00000598201 BACH2Q9BYV9 841 aa21.7■■□□□ 1.06
SHKBP1-216ENST00000598201 ABCA3Q99758 1704 aa21.7■■□□□ 1.06
SHKBP1-216ENST00000598201 RGS3P49796 1198 aa21.7■■□□□ 1.06
SHKBP1-216ENST00000598201 RGPD2P0DJD1 1756 aa21.69■■□□□ 1.06
SHKBP1-216ENST00000598201 AXIN2Q9Y2T1 843 aa21.69■■□□□ 1.06
SHKBP1-216ENST00000598201 MAP3K5Q99683 1374 aa21.69■■□□□ 1.06
SHKBP1-216ENST00000598201 IL17REQ8NFR9 667 aa21.68■■□□□ 1.06
SHKBP1-216ENST00000598201 TSPYL4Q9UJ04 414 aa21.68■■□□□ 1.06
SHKBP1-216ENST00000598201 LRRC37A3O60309 1634 aa21.68■■□□□ 1.06
SHKBP1-216ENST00000598201 LRP6O75581 1613 aa21.68■■□□□ 1.06
SHKBP1-216ENST00000598201 ZBTB40Q9NUA8 1239 aa21.68■■□□□ 1.06
SHKBP1-216ENST00000598201 RWDD1Q9H446 243 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-216ENST00000598201 ANKRD24Q8TF21 1146 aa21.66■■□□□ 1.06
SHKBP1-216ENST00000598201 MEX3CQ5U5Q3 659 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-216ENST00000598201 PRDM11Q9NQV5 511 aa21.65■■□□□ 1.06
SHKBP1-216ENST00000598201 ABCC4O15439 1325 aa21.65■■□□□ 1.06
SHKBP1-216ENST00000598201 CPDO75976 1380 aa21.65■■□□□ 1.06
SHKBP1-216ENST00000598201 MSH5O43196 834 aa21.64■■□□□ 1.05
SHKBP1-216ENST00000598201 CHRNA2Q15822 529 aa21.63■■□□□ 1.05
SHKBP1-216ENST00000598201 C8orf37Q96NL8 207 aa21.63■■□□□ 1.05
SHKBP1-216ENST00000598201 NCAPD2Q15021 1401 aa21.63■■□□□ 1.05
SHKBP1-216ENST00000598201 ZBTB7BO15156 539 aaPredicted RBP21.62■■□□□ 1.05
SHKBP1-216ENST00000598201 NGLY1Q96IV0 654 aa21.62■■□□□ 1.05
SHKBP1-216ENST00000598201 API5Q9BZZ5 524 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-216ENST00000598201 HDAC1Q13547 482 aaPredicted RBP21.61■■□□□ 1.05
SHKBP1-216ENST00000598201 PDZRN3Q9UPQ7 1066 aa21.61■■□□□ 1.05
SHKBP1-216ENST00000598201 RGPD5Q99666 1765 aa21.6■■□□□ 1.05
SHKBP1-216ENST00000598201 RGS12O14924 1447 aa21.6■■□□□ 1.05
SHKBP1-216ENST00000598201 TAF7Q15545 349 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-216ENST00000598201 CEMIPQ8WUJ3 1361 aa21.59■■□□□ 1.05
SHKBP1-216ENST00000598201 ERBB3P21860 1342 aa21.59■■□□□ 1.05
SHKBP1-216ENST00000598201 C8orf34Q49A92 452 aa21.59■■□□□ 1.05
SHKBP1-216ENST00000598201 LGR6Q9HBX8 967 aa21.59■■□□□ 1.05
SHKBP1-216ENST00000598201 CAMTA1Q9Y6Y1 1673 aa21.58■■□□□ 1.04
SHKBP1-216ENST00000598201 SLC4A2P04920 1241 aa21.57■■□□□ 1.04
SHKBP1-216ENST00000598201 FAM161AQ3B820 660 aa21.57■■□□□ 1.04
SHKBP1-216ENST00000598201 PLEKHO1Q53GL0 409 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-216ENST00000598201 ZNF530Q6P9A1 599 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-216ENST00000598201 BTG4Q9NY30 223 aa21.57■■□□□ 1.04
SHKBP1-216ENST00000598201 COL14A1Q05707 1796 aaKnown RBP21.56■■□□□ 1.04
SHKBP1-216ENST00000598201 FNBP4Q8N3X1 1017 aaPredicted RBP21.56■■□□□ 1.04
SHKBP1-216ENST00000598201 C1orf115Q9H7X2 142 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms