RNA–Protein interactions for RNA: ENST00000597598.1

SMG9-206, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG9, Length 1,077 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-206ENST00000597598 DDX54Q8TDD1 881 aaKnown RBP15.39■□□□□ 0.05
SMG9-206ENST00000597598 ANKRD24Q8TF21 1146 aa15.39■□□□□ 0.05
SMG9-206ENST00000597598 KLRG1Q96E93 195 aa15.39■□□□□ 0.05
SMG9-206ENST00000597598 IGSF1Q8N6C5 1336 aa15.39■□□□□ 0.05
SMG9-206ENST00000597598 CAPN15O75808 1086 aa15.38■□□□□ 0.05
SMG9-206ENST00000597598 TNS4Q8IZW8 715 aa15.38■□□□□ 0.05
SMG9-206ENST00000597598 FLAD1Q8NFF5 587 aa15.38■□□□□ 0.05
SMG9-206ENST00000597598 CICQ96RK0 1608 aaPredicted RBP15.38■□□□□ 0.05
SMG9-206ENST00000597598 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
SMG9-206ENST00000597598 SYTL4Q96C24 671 aaPredicted RBP15.37■□□□□ 0.05
SMG9-206ENST00000597598 EVC2Q86UK5 1308 aa15.37■□□□□ 0.05
SMG9-206ENST00000597598 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
SMG9-206ENST00000597598 WDR90Q96KV7 1748 aa15.36■□□□□ 0.05
SMG9-206ENST00000597598 USP54Q70EL1 1684 aa15.35■□□□□ 0.05
SMG9-206ENST00000597598 RBM46Q8TBY0 533 aaKnown RBP15.35■□□□□ 0.05
SMG9-206ENST00000597598 KTN1Q86UP2 1357 aaKnown RBP15.34■□□□□ 0.05
SMG9-206ENST00000597598 DOT1LQ8TEK3 1739 aa15.33■□□□□ 0.04
SMG9-206ENST00000597598 USP47Q96K76 1375 aa15.33■□□□□ 0.04
SMG9-206ENST00000597598 LTN1O94822 1766 aa15.31■□□□□ 0.04
SMG9-206ENST00000597598 SLC34A2O95436 690 aa15.31■□□□□ 0.04
SMG9-206ENST00000597598 FSTL1Q12841 308 aa15.31■□□□□ 0.04
SMG9-206ENST00000597598 NMRK2Q9NPI5 230 aa15.31■□□□□ 0.04
SMG9-206ENST00000597598 C5P01031 1676 aa15.3■□□□□ 0.04
SMG9-206ENST00000597598 HTRA3P83110 453 aa15.3■□□□□ 0.04
SMG9-206ENST00000597598 ZCRB1Q8TBF4 217 aaKnown RBP15.3■□□□□ 0.04
SMG9-206ENST00000597598 IP6K1Q92551 441 aa15.3■□□□□ 0.04
SMG9-206ENST00000597598 WWC3Q9ULE0 1092 aa15.3■□□□□ 0.04
SMG9-206ENST00000597598 MON2Q7Z3U7 1717 aa15.29■□□□□ 0.04
SMG9-206ENST00000597598 SBNO2Q9Y2G9 1366 aa15.29■□□□□ 0.04
SMG9-206ENST00000597598 AMIGO3Q86WK7 504 aa15.29■□□□□ 0.04
SMG9-206ENST00000597598 NME9Q86XW9 330 aa15.29■□□□□ 0.04
SMG9-206ENST00000597598 FAM208AQ9UK61 1670 aaKnown RBP15.28■□□□□ 0.04
SMG9-206ENST00000597598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMG9-206ENST00000597598 TAF1LQ8IZX4 1826 aa15.27■□□□□ 0.03
SMG9-206ENST00000597598 TOGARAM1Q9Y4F4 1720 aa15.26■□□□□ 0.03
SMG9-206ENST00000597598 MEGF6O75095 1541 aa15.25■□□□□ 0.03
SMG9-206ENST00000597598 CD163L1Q9NR16 1453 aa15.25■□□□□ 0.03
SMG9-206ENST00000597598 PALLDQ8WX93 1383 aa15.24■□□□□ 0.03
SMG9-206ENST00000597598 C4BP0C0L5 1744 aa15.24■□□□□ 0.03
SMG9-206ENST00000597598 PXDNLA1KZ92 1463 aa15.24■□□□□ 0.03
SMG9-206ENST00000597598 C10orf71Q711Q0 1435 aa15.24■□□□□ 0.03
SMG9-206ENST00000597598 NSD3Q9BZ95 1437 aa15.24■□□□□ 0.03
SMG9-206ENST00000597598 CGNL1Q0VF96 1302 aa15.23■□□□□ 0.03
SMG9-206ENST00000597598 UBR3Q6ZT12 1888 aa15.23■□□□□ 0.03
SMG9-206ENST00000597598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.23■□□□□ 0.03
SMG9-206ENST00000597598 SSFA2P28290 1259 aa15.23■□□□□ 0.03
SMG9-206ENST00000597598 TGFB2P61812 414 aa15.23■□□□□ 0.03
SMG9-206ENST00000597598 C16orf71Q8IYS4 520 aaPredicted RBP15.23■□□□□ 0.03
SMG9-206ENST00000597598 LTV1Q96GA3 475 aaPredicted RBP15.23■□□□□ 0.03
SMG9-206ENST00000597598 AK7Q96M32 723 aa15.23■□□□□ 0.03
SMG9-206ENST00000597598 KIAA1551Q9HCM1 1747 aa15.22■□□□□ 0.03
SMG9-206ENST00000597598 KIF13BQ9NQT8 1826 aa15.22■□□□□ 0.03
SMG9-206ENST00000597598 ARHGAP27Q6ZUM4 889 aa15.21■□□□□ 0.03
SMG9-206ENST00000597598 BCS1LQ9Y276 419 aa15.21■□□□□ 0.03
SMG9-206ENST00000597598 PLEKHG2Q9H7P9 1386 aa15.21■□□□□ 0.02
SMG9-206ENST00000597598 EDC4Q6P2E9 1401 aaKnown RBP15.2■□□□□ 0.02
SMG9-206ENST00000597598 HSPA1AP0DMV8 641 aaKnown RBP15.2■□□□□ 0.02
SMG9-206ENST00000597598 HSPA1BP0DMV9 641 aaKnown RBP15.2■□□□□ 0.02
SMG9-206ENST00000597598 HOXC9P31274 260 aa15.2■□□□□ 0.02
SMG9-206ENST00000597598 SMIM5Q71RC9 77 aa15.2■□□□□ 0.02
SMG9-206ENST00000597598 PHF14O94880 888 aa15.19■□□□□ 0.02
SMG9-206ENST00000597598 C9orf131Q5VYM1 1079 aa15.19■□□□□ 0.02
SMG9-206ENST00000597598 SMARCC1Q92922 1105 aaPredicted RBP15.19■□□□□ 0.02
SMG9-206ENST00000597598 A0A0G2JLW4 131 aa15.18■□□□□ 0.02
SMG9-206ENST00000597598 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
SMG9-206ENST00000597598 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
SMG9-206ENST00000597598 MMP10P09238 476 aa15.17■□□□□ 0.02
SMG9-206ENST00000597598 NBPF6Q5VWK0 638 aa15.17■□□□□ 0.02
SMG9-206ENST00000597598 MPRIPQ6WCQ1 1025 aa15.17■□□□□ 0.02
SMG9-206ENST00000597598 SMC1BQ8NDV3 1235 aa15.17■□□□□ 0.02
SMG9-206ENST00000597598 NBPF4Q96M43 638 aa15.17■□□□□ 0.02
SMG9-206ENST00000597598 RGPD2P0DJD1 1756 aa15.16■□□□□ 0.02
SMG9-206ENST00000597598 HDGFL2Q7Z4V5 671 aaPredicted RBP15.16■□□□□ 0.02
SMG9-206ENST00000597598 KCPQ6ZWJ8 1503 aa15.16■□□□□ 0.02
SMG9-206ENST00000597598 N4BP2Q86UW6 1770 aaPredicted RBP15.16■□□□□ 0.02
SMG9-206ENST00000597598 FCHSD2O94868 740 aa15.15■□□□□ 0.02
SMG9-206ENST00000597598 DPEP1P16444 411 aa15.15■□□□□ 0.02
SMG9-206ENST00000597598 KCNA3P22001 575 aa15.15■□□□□ 0.02
SMG9-206ENST00000597598 LINC00116Q8NCU8 138 aa15.15■□□□□ 0.02
SMG9-206ENST00000597598 SLC12A5Q9H2X9 1139 aa15.15■□□□□ 0.02
SMG9-206ENST00000597598 RRAGCQ9HB90 399 aa15.15■□□□□ 0.02
SMG9-206ENST00000597598 MAP2P11137 1827 aaKnown RBP15.15■□□□□ 0.02
SMG9-206ENST00000597598 PCDH11XQ9BZA7 1347 aa15.15■□□□□ 0.02
SMG9-206ENST00000597598 PCDH11YQ9BZA8 1340 aa15.15■□□□□ 0.02
SMG9-206ENST00000597598 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
SMG9-206ENST00000597598 PCDH10Q9P2E7 1040 aa15.14■□□□□ 0.01
SMG9-206ENST00000597598 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
SMG9-206ENST00000597598 LOC102724428A0A0B4J2F2 783 aa15.13■□□□□ 0.01
SMG9-206ENST00000597598 CYP27B1O15528 508 aa15.13■□□□□ 0.01
SMG9-206ENST00000597598 AMPHP49418 695 aa15.13■□□□□ 0.01
SMG9-206ENST00000597598 SIK1P57059 783 aa15.13■□□□□ 0.01
SMG9-206ENST00000597598 PIGBQ92521 554 aa15.13■□□□□ 0.01
SMG9-206ENST00000597598 TERF2IPQ9NYB0 399 aa15.13■□□□□ 0.01
SMG9-206ENST00000597598 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
SMG9-206ENST00000597598 RTL1A6NKG5 1358 aa15.12■□□□□ 0.01
SMG9-206ENST00000597598 NLGN1Q8N2Q7 840 aa15.12■□□□□ 0.01
SMG9-206ENST00000597598 TMC1Q8TDI8 760 aa15.12■□□□□ 0.01
SMG9-206ENST00000597598 DCAF5Q96JK2 942 aa15.12■□□□□ 0.01
SMG9-206ENST00000597598 TNRC6CQ9HCJ0 1690 aaKnown RBP15.12■□□□□ 0.01
SMG9-206ENST00000597598 PKD1L3Q7Z443 1732 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms