RNA–Protein interactions for RNA: ENST00000597573.1

PDE4C-212, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 603 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-212ENST00000597573 NEUROD2Q15784 382 aa20.45■□□□□ 0.86
PDE4C-212ENST00000597573 AMOTQ4VCS5 1084 aa20.45■□□□□ 0.86
PDE4C-212ENST00000597573 WNK3Q9BYP7 1800 aa20.45■□□□□ 0.86
PDE4C-212ENST00000597573 MTHFSDQ2M296 383 aaKnown RBP20.44■□□□□ 0.86
PDE4C-212ENST00000597573 PLEKHO1Q53GL0 409 aaPredicted RBP20.44■□□□□ 0.86
PDE4C-212ENST00000597573 LMOD3Q0VAK6 560 aa20.43■□□□□ 0.86
PDE4C-212ENST00000597573 DISP2A7MBM2 1401 aa20.43■□□□□ 0.86
PDE4C-212ENST00000597573 WWC1Q8IX03 1113 aa20.42■□□□□ 0.86
PDE4C-212ENST00000597573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.42■□□□□ 0.86
PDE4C-212ENST00000597573 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
PDE4C-212ENST00000597573 SPATA31A1Q5TZJ5 1347 aa20.42■□□□□ 0.86
PDE4C-212ENST00000597573 SPATA31A5Q5VU36 1347 aa20.42■□□□□ 0.86
PDE4C-212ENST00000597573 SPATA31A7Q8IWB4 1347 aa20.42■□□□□ 0.86
PDE4C-212ENST00000597573 IL2RBP14784 551 aa20.41■□□□□ 0.86
PDE4C-212ENST00000597573 PDE3BQ13370 1112 aa20.41■□□□□ 0.86
PDE4C-212ENST00000597573 VPS72Q15906 364 aa20.41■□□□□ 0.86
PDE4C-212ENST00000597573 USP21Q9UK80 565 aa20.41■□□□□ 0.86
PDE4C-212ENST00000597573 THRAP3Q9Y2W1 955 aaKnown RBP20.41■□□□□ 0.86
PDE4C-212ENST00000597573 AFF2P51816 1311 aa20.41■□□□□ 0.86
PDE4C-212ENST00000597573 MAP3K5Q99683 1374 aa20.4■□□□□ 0.86
PDE4C-212ENST00000597573 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
PDE4C-212ENST00000597573 USP35Q9P2H5 1018 aa20.39■□□□□ 0.85
PDE4C-212ENST00000597573 SPG7Q9UQ90 795 aa20.39■□□□□ 0.85
PDE4C-212ENST00000597573 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
PDE4C-212ENST00000597573 CENPBP07199 599 aaPredicted RBP20.38■□□□□ 0.85
PDE4C-212ENST00000597573 WDR63Q8IWG1 891 aa20.38■□□□□ 0.85
PDE4C-212ENST00000597573 ATRNO75882 1429 aa20.37■□□□□ 0.85
PDE4C-212ENST00000597573 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
PDE4C-212ENST00000597573 CDCA7Q9BWT1 371 aaPredicted RBP20.37■□□□□ 0.85
PDE4C-212ENST00000597573 CCDC9Q9Y3X0 531 aaKnown RBP20.37■□□□□ 0.85
PDE4C-212ENST00000597573 LRRC37A3O60309 1634 aa20.37■□□□□ 0.85
PDE4C-212ENST00000597573 SHANK3Q9BYB0 1731 aa20.36■□□□□ 0.85
PDE4C-212ENST00000597573 GNAT3A8MTJ3 354 aa20.36■□□□□ 0.85
PDE4C-212ENST00000597573 AKAP4Q5JQC9 854 aa20.36■□□□□ 0.85
PDE4C-212ENST00000597573 BARGINQ6ZT62 677 aa20.36■□□□□ 0.85
PDE4C-212ENST00000597573 IL16Q14005 1332 aa20.35■□□□□ 0.85
PDE4C-212ENST00000597573 CALD1Q05682 793 aaKnown RBP20.35■□□□□ 0.85
PDE4C-212ENST00000597573 C1orf141Q5JVX7 400 aa20.35■□□□□ 0.85
PDE4C-212ENST00000597573 ZCRB1Q8TBF4 217 aaKnown RBP20.35■□□□□ 0.85
PDE4C-212ENST00000597573 RTF1Q92541 710 aaKnown RBP20.35■□□□□ 0.85
PDE4C-212ENST00000597573 ADAMTS7Q9UKP4 1686 aa20.35■□□□□ 0.85
PDE4C-212ENST00000597573 PCDH11XQ9BZA7 1347 aa20.34■□□□□ 0.85
PDE4C-212ENST00000597573 PCDH11YQ9BZA8 1340 aa20.34■□□□□ 0.85
PDE4C-212ENST00000597573 TNS2Q63HR2 1409 aa20.34■□□□□ 0.85
PDE4C-212ENST00000597573 TRPC5Q9UL62 973 aaPredicted RBP20.33■□□□□ 0.85
PDE4C-212ENST00000597573 GLI3P10071 1580 aa20.33■□□□□ 0.84
PDE4C-212ENST00000597573 E9PSI1 815 aa20.32■□□□□ 0.84
PDE4C-212ENST00000597573 PHKG2P15735 406 aa20.32■□□□□ 0.84
PDE4C-212ENST00000597573 IFNL2Q8IZJ0 200 aa20.32■□□□□ 0.84
PDE4C-212ENST00000597573 CDCA7LQ96GN5 454 aa20.32■□□□□ 0.84
PDE4C-212ENST00000597573 CYP27B1O15528 508 aa20.31■□□□□ 0.84
PDE4C-212ENST00000597573 SLFN5Q08AF3 891 aa20.31■□□□□ 0.84
PDE4C-212ENST00000597573 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
PDE4C-212ENST00000597573 MCM10Q7L590 875 aa20.31■□□□□ 0.84
PDE4C-212ENST00000597573 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
PDE4C-212ENST00000597573 CEMIPQ8WUJ3 1361 aa20.31■□□□□ 0.84
PDE4C-212ENST00000597573 VIRMAQ69YN4 1812 aaKnown RBP20.3■□□□□ 0.84
PDE4C-212ENST00000597573 THSD7AQ9UPZ6 1657 aa20.3■□□□□ 0.84
PDE4C-212ENST00000597573 SCN11AQ9UI33 1791 aa20.3■□□□□ 0.84
PDE4C-212ENST00000597573 HSP90AB1P08238 724 aaKnown RBP20.29■□□□□ 0.84
PDE4C-212ENST00000597573 TRMT2AQ8IZ69 625 aaKnown RBP20.29■□□□□ 0.84
PDE4C-212ENST00000597573 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
PDE4C-212ENST00000597573 GJD4Q96KN9 370 aaPredicted RBP20.29■□□□□ 0.84
PDE4C-212ENST00000597573 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
PDE4C-212ENST00000597573 KDM6AO15550 1401 aaPredicted RBP20.28■□□□□ 0.84
PDE4C-212ENST00000597573 ZNF772Q68DY9 489 aaPredicted RBP20.28■□□□□ 0.84
PDE4C-212ENST00000597573 MYH16Q9H6N6 1097 aa20.28■□□□□ 0.84
PDE4C-212ENST00000597573 IFT57Q9NWB7 429 aa20.28■□□□□ 0.84
PDE4C-212ENST00000597573 EXOC5O00471 708 aa20.27■□□□□ 0.84
PDE4C-212ENST00000597573 RNMTO43148 476 aaKnown RBP20.27■□□□□ 0.84
PDE4C-212ENST00000597573 FAM98CQ17RN3 349 aaKnown RBP20.27■□□□□ 0.84
PDE4C-212ENST00000597573 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
PDE4C-212ENST00000597573 MRC1P22897 1456 aa20.26■□□□□ 0.83
PDE4C-212ENST00000597573 ZNF853P0CG23 659 aa20.26■□□□□ 0.83
PDE4C-212ENST00000597573 GNAI1P63096 354 aa20.26■□□□□ 0.83
PDE4C-212ENST00000597573 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
PDE4C-212ENST00000597573 DDB1Q16531 1140 aa20.26■□□□□ 0.83
PDE4C-212ENST00000597573 MPRIPQ6WCQ1 1025 aa20.26■□□□□ 0.83
PDE4C-212ENST00000597573 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
PDE4C-212ENST00000597573 QTRT2Q9H974 415 aaKnown RBP20.26■□□□□ 0.83
PDE4C-212ENST00000597573 DDX54Q8TDD1 881 aaKnown RBP20.25■□□□□ 0.83
PDE4C-212ENST00000597573 CFAP44Q96MT7 982 aa20.25■□□□□ 0.83
PDE4C-212ENST00000597573 LGR6Q9HBX8 967 aa20.25■□□□□ 0.83
PDE4C-212ENST00000597573 SIPA1L3O60292 1781 aaPredicted RBP20.25■□□□□ 0.83
PDE4C-212ENST00000597573 FANCIQ9NVI1 1328 aa20.24■□□□□ 0.83
PDE4C-212ENST00000597573 CHL1O00533 1208 aa20.22■□□□□ 0.83
PDE4C-212ENST00000597573 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
PDE4C-212ENST00000597573 TEFQ10587 303 aa20.22■□□□□ 0.83
PDE4C-212ENST00000597573 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
PDE4C-212ENST00000597573 LAS1LQ9Y4W2 734 aaKnown RBP20.22■□□□□ 0.83
PDE4C-212ENST00000597573 TOGARAM1Q9Y4F4 1720 aa20.22■□□□□ 0.83
PDE4C-212ENST00000597573 TAF7Q15545 349 aaPredicted RBP20.21■□□□□ 0.83
PDE4C-212ENST00000597573 TSR2Q969E8 191 aaKnown RBP20.21■□□□□ 0.83
PDE4C-212ENST00000597573 MBIPQ9NS73 344 aa20.2■□□□□ 0.82
PDE4C-212ENST00000597573 KDM3BQ7LBC6 1761 aa20.2■□□□□ 0.82
PDE4C-212ENST00000597573 SLC52A2Q9HAB3 445 aa20.19■□□□□ 0.82
PDE4C-212ENST00000597573 A0A0G2JS52 829 aa20.18■□□□□ 0.82
PDE4C-212ENST00000597573 ERVV-2B6SEH9 535 aa20.18■□□□□ 0.82
PDE4C-212ENST00000597573 RBM6P78332 1123 aaKnown RBP20.18■□□□□ 0.82
PDE4C-212ENST00000597573 MYT1Q01538 1121 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms