RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 EZH2Q15910 746 aaKnown RBP22.24■■□□□ 1.15
CHERP-206ENST00000597261 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.24■■□□□ 1.15
CHERP-206ENST00000597261 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
CHERP-206ENST00000597261 IGSF1Q8N6C5 1336 aa22.23■■□□□ 1.15
CHERP-206ENST00000597261 RGPD2P0DJD1 1756 aa22.21■■□□□ 1.15
CHERP-206ENST00000597261 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
CHERP-206ENST00000597261 ACSBG1Q96GR2 724 aa22.21■■□□□ 1.15
CHERP-206ENST00000597261 PARD3Q8TEW0 1356 aa22.2■■□□□ 1.14
CHERP-206ENST00000597261 CYP27B1O15528 508 aa22.19■■□□□ 1.14
CHERP-206ENST00000597261 PROM2Q8N271 834 aa22.19■■□□□ 1.14
CHERP-206ENST00000597261 SPG7Q9UQ90 795 aa22.19■■□□□ 1.14
CHERP-206ENST00000597261 RGPD1P0DJD0 1748 aa22.19■■□□□ 1.14
CHERP-206ENST00000597261 NKX1-1Q15270 411 aaPredicted RBP22.18■■□□□ 1.14
CHERP-206ENST00000597261 PCDH11XQ9BZA7 1347 aa22.17■■□□□ 1.14
CHERP-206ENST00000597261 PCDH11YQ9BZA8 1340 aa22.17■■□□□ 1.14
CHERP-206ENST00000597261 PRIM1P49642 420 aaKnown RBP22.17■■□□□ 1.14
CHERP-206ENST00000597261 DDX10Q13206 875 aaKnown RBP22.17■■□□□ 1.14
CHERP-206ENST00000597261 PLEKHG2Q9H7P9 1386 aa22.16■■□□□ 1.14
CHERP-206ENST00000597261 DIAPH1O60610 1272 aaKnown RBP22.16■■□□□ 1.14
CHERP-206ENST00000597261 PPP2R1AP30153 589 aa22.15■■□□□ 1.14
CHERP-206ENST00000597261 SULT6B1Q6IMI4 303 aa22.15■■□□□ 1.14
CHERP-206ENST00000597261 AEBP1Q8IUX7 1158 aa22.15■■□□□ 1.14
CHERP-206ENST00000597261 TNS1Q9HBL0 1735 aaKnown RBP22.14■■□□□ 1.14
CHERP-206ENST00000597261 PLEKHO1Q53GL0 409 aaPredicted RBP22.13■■□□□ 1.13
CHERP-206ENST00000597261 KDRP35968 1356 aa22.12■■□□□ 1.13
CHERP-206ENST00000597261 AMOTQ4VCS5 1084 aa22.12■■□□□ 1.13
CHERP-206ENST00000597261 SBF2Q86WG5 1849 aa22.12■■□□□ 1.13
CHERP-206ENST00000597261 PHKG2P15735 406 aa22.11■■□□□ 1.13
CHERP-206ENST00000597261 IFNL2Q8IZJ0 200 aa22.11■■□□□ 1.13
CHERP-206ENST00000597261 TXNRD1Q16881 649 aa22.1■■□□□ 1.13
CHERP-206ENST00000597261 SYTL4Q96C24 671 aaPredicted RBP22.09■■□□□ 1.13
CHERP-206ENST00000597261 NBPF14Q5TI25 921 aa22.08■■□□□ 1.13
CHERP-206ENST00000597261 CFAP53Q96M91 514 aa22.08■■□□□ 1.13
CHERP-206ENST00000597261 HMOX1P09601 288 aa22.06■■□□□ 1.12
CHERP-206ENST00000597261 RALBP1Q15311 655 aa22.06■■□□□ 1.12
CHERP-206ENST00000597261 COL3A1P02461 1466 aaPredicted RBP22.06■■□□□ 1.12
CHERP-206ENST00000597261 SHANK3Q9BYB0 1731 aa22.06■■□□□ 1.12
CHERP-206ENST00000597261 HSP90AB1P08238 724 aaKnown RBP22.04■■□□□ 1.12
CHERP-206ENST00000597261 R3HDM1Q15032 1099 aaKnown RBP22.04■■□□□ 1.12
CHERP-206ENST00000597261 MPRIPQ6WCQ1 1025 aa22.04■■□□□ 1.12
CHERP-206ENST00000597261 PIGBQ92521 554 aa22.04■■□□□ 1.12
CHERP-206ENST00000597261 NHSQ6T4R5 1651 aa22.04■■□□□ 1.12
CHERP-206ENST00000597261 PSDA5PKW4 1024 aaPredicted RBP22.03■■□□□ 1.12
CHERP-206ENST00000597261 SLC27A3Q5K4L6 730 aa22.03■■□□□ 1.12
CHERP-206ENST00000597261 ZNF530Q6P9A1 599 aaPredicted RBP22.03■■□□□ 1.12
CHERP-206ENST00000597261 DCAF5Q96JK2 942 aa22.03■■□□□ 1.12
CHERP-206ENST00000597261 KAT6BQ8WYB5 2073 aa22.02■■□□□ 1.12
CHERP-206ENST00000597261 ERVV-2B6SEH9 535 aa22.02■■□□□ 1.12
CHERP-206ENST00000597261 U2SURPO15042 1029 aaKnown RBP22.02■■□□□ 1.12
CHERP-206ENST00000597261 LRRC4BQ9NT99 713 aa22.02■■□□□ 1.12
CHERP-206ENST00000597261 NUDCQ9Y266 331 aa22.02■■□□□ 1.12
CHERP-206ENST00000597261 PKD1L3Q7Z443 1732 aa22.02■■□□□ 1.12
CHERP-206ENST00000597261 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
CHERP-206ENST00000597261 MTHFSDQ2M296 383 aaKnown RBP21.99■■□□□ 1.11
CHERP-206ENST00000597261 C1orf141Q5JVX7 400 aa21.99■■□□□ 1.11
CHERP-206ENST00000597261 ANO8Q9HCE9 1232 aaPredicted RBP21.99■■□□□ 1.11
CHERP-206ENST00000597261 RGPD3A6NKT7 1758 aaPredicted RBP21.98■■□□□ 1.11
CHERP-206ENST00000597261 RGPD4Q7Z3J3 1758 aa21.98■■□□□ 1.11
CHERP-206ENST00000597261 AKAP4Q5JQC9 854 aa21.98■■□□□ 1.11
CHERP-206ENST00000597261 FCHSD2O94868 740 aa21.97■■□□□ 1.11
CHERP-206ENST00000597261 SMARCC1Q92922 1105 aaPredicted RBP21.97■■□□□ 1.11
CHERP-206ENST00000597261 TMOD3Q9NYL9 352 aa21.97■■□□□ 1.11
CHERP-206ENST00000597261 RREB1Q92766 1687 aa21.96■■□□□ 1.11
CHERP-206ENST00000597261 SLC15A2Q16348 729 aa21.96■■□□□ 1.11
CHERP-206ENST00000597261 RSPH6AQ9H0K4 717 aa21.96■■□□□ 1.11
CHERP-206ENST00000597261 BTAF1O14981 1849 aa21.95■■□□□ 1.1
CHERP-206ENST00000597261 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
CHERP-206ENST00000597261 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
CHERP-206ENST00000597261 STK32BQ9NY57 414 aa21.95■■□□□ 1.1
CHERP-206ENST00000597261 SRCAPQ6ZRS2 3230 aa21.95■■□□□ 1.1
CHERP-206ENST00000597261 KCNQ4P56696 695 aa21.94■■□□□ 1.1
CHERP-206ENST00000597261 AKT1S1Q96B36 256 aa21.94■■□□□ 1.1
CHERP-206ENST00000597261 PHACTR3Q96KR7 559 aa21.94■■□□□ 1.1
CHERP-206ENST00000597261 ATG3Q9NT62 314 aa21.94■■□□□ 1.1
CHERP-206ENST00000597261 ASAP1Q9ULH1 1129 aa21.94■■□□□ 1.1
CHERP-206ENST00000597261 LGR6Q9HBX8 967 aa21.93■■□□□ 1.1
CHERP-206ENST00000597261 CCNL1Q9UK58 526 aaPredicted RBP21.93■■□□□ 1.1
CHERP-206ENST00000597261 NUP188Q5SRE5 1749 aa21.92■■□□□ 1.1
CHERP-206ENST00000597261 KDM6AO15550 1401 aaPredicted RBP21.92■■□□□ 1.1
CHERP-206ENST00000597261 HMGB2P26583 209 aaKnown RBP21.92■■□□□ 1.1
CHERP-206ENST00000597261 PRKAR2BP31323 418 aa21.92■■□□□ 1.1
CHERP-206ENST00000597261 CABP4P57796 275 aa21.92■■□□□ 1.1
CHERP-206ENST00000597261 NFATC2IPQ8NCF5 419 aa21.92■■□□□ 1.1
CHERP-206ENST00000597261 PRKRIP1Q9H875 184 aaPredicted RBP21.92■■□□□ 1.1
CHERP-206ENST00000597261 DOT1LQ8TEK3 1739 aa21.92■■□□□ 1.1
CHERP-206ENST00000597261 PALLDQ8WX93 1383 aa21.91■■□□□ 1.1
CHERP-206ENST00000597261 RNMTO43148 476 aaKnown RBP21.91■■□□□ 1.1
CHERP-206ENST00000597261 GAS2L2Q8NHY3 880 aa21.91■■□□□ 1.1
CHERP-206ENST00000597261 MYBBP1AQ9BQG0 1328 aaKnown RBP21.9■■□□□ 1.1
CHERP-206ENST00000597261 ZNF827Q17R98 1081 aa21.89■■□□□ 1.09
CHERP-206ENST00000597261 LOC102724428A0A0B4J2F2 783 aa21.88■■□□□ 1.09
CHERP-206ENST00000597261 SIK1P57059 783 aa21.88■■□□□ 1.09
CHERP-206ENST00000597261 PDGFDQ9GZP0 370 aaPredicted RBP21.88■■□□□ 1.09
CHERP-206ENST00000597261 TOGARAM1Q9Y4F4 1720 aa21.88■■□□□ 1.09
CHERP-206ENST00000597261 GNAT3A8MTJ3 354 aa21.87■■□□□ 1.09
CHERP-206ENST00000597261 IL17REQ8NFR9 667 aa21.87■■□□□ 1.09
CHERP-206ENST00000597261 SLC52A2Q9HAB3 445 aa21.87■■□□□ 1.09
CHERP-206ENST00000597261 PLEKHF1Q96S99 279 aa21.86■■□□□ 1.09
CHERP-206ENST00000597261 SLC4A9Q96Q91 983 aa21.84■■□□□ 1.09
CHERP-206ENST00000597261 ITGB4P16144 1822 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms