RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 RBM25P49756 843 aaKnown RBP28.83■■■□□ 2.2
SPTBN4-209ENST00000596411 GSE1Q14687 1217 aa28.83■■■□□ 2.2
SPTBN4-209ENST00000596411 NUTM2FA1L443 756 aa28.82■■■□□ 2.2
SPTBN4-209ENST00000596411 HTATSF1O43719 755 aaKnown RBP28.8■■■□□ 2.2
SPTBN4-209ENST00000596411 NGDNQ8NEJ9 315 aaKnown RBP28.8■■■□□ 2.2
SPTBN4-209ENST00000596411 MFAP1P55081 439 aaKnown RBP28.8■■■□□ 2.2
SPTBN4-209ENST00000596411 FRAT2O75474 233 aaPredicted RBP28.79■■■□□ 2.2
SPTBN4-209ENST00000596411 ATP10DQ9P241 1426 aa28.79■■■□□ 2.2
SPTBN4-209ENST00000596411 ANKRD45Q5TZF3 282 aa28.78■■■□□ 2.2
SPTBN4-209ENST00000596411 GAS2L2Q8NHY3 880 aa28.78■■■□□ 2.2
SPTBN4-209ENST00000596411 MCM10Q7L590 875 aa28.78■■■□□ 2.2
SPTBN4-209ENST00000596411 EIF5BO60841 1220 aaKnown RBP28.77■■■□□ 2.2
SPTBN4-209ENST00000596411 C1orf115Q9H7X2 142 aa28.77■■■□□ 2.2
SPTBN4-209ENST00000596411 NWD1Q149M9 1564 aa28.77■■■□□ 2.2
SPTBN4-209ENST00000596411 DCTPP1Q9H773 170 aa28.76■■■□□ 2.2
SPTBN4-209ENST00000596411 ZNF142P52746 1687 aaPredicted RBP28.76■■■□□ 2.2
SPTBN4-209ENST00000596411 RTL1A6NKG5 1358 aa28.76■■■□□ 2.19
SPTBN4-209ENST00000596411 RPAP2Q8IXW5 612 aaPredicted RBP28.75■■■□□ 2.19
SPTBN4-209ENST00000596411 ANKRD44Q8N8A2 993 aa28.75■■■□□ 2.19
SPTBN4-209ENST00000596411 MTHFSDQ2M296 383 aaKnown RBP28.74■■■□□ 2.19
SPTBN4-209ENST00000596411 CHD2O14647 1828 aaKnown RBP28.74■■■□□ 2.19
SPTBN4-209ENST00000596411 SOS1Q07889 1333 aaPredicted RBP28.74■■■□□ 2.19
SPTBN4-209ENST00000596411 SNX21Q969T3 373 aa28.74■■■□□ 2.19
SPTBN4-209ENST00000596411 EYA1Q99502 592 aa28.73■■■□□ 2.19
SPTBN4-209ENST00000596411 NCOA3Q9Y6Q9 1424 aa28.73■■■□□ 2.19
SPTBN4-209ENST00000596411 AMPHP49418 695 aa28.72■■■□□ 2.19
SPTBN4-209ENST00000596411 RTF1Q92541 710 aaKnown RBP28.72■■■□□ 2.19
SPTBN4-209ENST00000596411 KCNA6P17658 529 aa28.7■■■□□ 2.19
SPTBN4-209ENST00000596411 BABAM1Q9NWV8 329 aa28.7■■■□□ 2.19
SPTBN4-209ENST00000596411 KRT24Q2M2I5 525 aa28.7■■■□□ 2.18
SPTBN4-209ENST00000596411 MSH6P52701 1360 aa28.69■■■□□ 2.18
SPTBN4-209ENST00000596411 SLKQ9H2G2 1235 aaPredicted RBP28.69■■■□□ 2.18
SPTBN4-209ENST00000596411 N4BP2Q86UW6 1770 aaPredicted RBP28.69■■■□□ 2.18
SPTBN4-209ENST00000596411 FAM208AQ9UK61 1670 aaKnown RBP28.69■■■□□ 2.18
SPTBN4-209ENST00000596411 CACNA1FO60840 1977 aa28.67■■■□□ 2.18
SPTBN4-209ENST00000596411 HOXC9P31274 260 aa28.67■■■□□ 2.18
SPTBN4-209ENST00000596411 NLRP6P59044 892 aa28.66■■■□□ 2.18
SPTBN4-209ENST00000596411 CEP85Q6P2H3 762 aa28.66■■■□□ 2.18
SPTBN4-209ENST00000596411 HSCBQ8IWL3 235 aa28.66■■■□□ 2.18
SPTBN4-209ENST00000596411 TSPYL4Q9UJ04 414 aa28.66■■■□□ 2.18
SPTBN4-209ENST00000596411 PHRF1Q9P1Y6 1649 aaKnown RBP28.66■■■□□ 2.18
SPTBN4-209ENST00000596411 SOX12O15370 315 aa28.64■■■□□ 2.18
SPTBN4-209ENST00000596411 CHMP5Q9NZZ3 219 aa28.64■■■□□ 2.18
SPTBN4-209ENST00000596411 FOXO3O43524 673 aa28.63■■■□□ 2.17
SPTBN4-209ENST00000596411 CDC45O75419 566 aa28.63■■■□□ 2.17
SPTBN4-209ENST00000596411 TBC1D9Q6ZT07 1266 aa28.63■■■□□ 2.17
SPTBN4-209ENST00000596411 PLEKHM2Q8IWE5 1019 aa28.63■■■□□ 2.17
SPTBN4-209ENST00000596411 CCT4P50991 539 aaKnown RBP28.63■■■□□ 2.17
SPTBN4-209ENST00000596411 SLC4A2P04920 1241 aa28.61■■■□□ 2.17
SPTBN4-209ENST00000596411 MAP3K5Q99683 1374 aa28.61■■■□□ 2.17
SPTBN4-209ENST00000596411 NFAT5O94916 1531 aa28.61■■■□□ 2.17
SPTBN4-209ENST00000596411 GNAT3A8MTJ3 354 aa28.61■■■□□ 2.17
SPTBN4-209ENST00000596411 LTN1O94822 1766 aa28.6■■■□□ 2.17
SPTBN4-209ENST00000596411 PXDNLA1KZ92 1463 aa28.6■■■□□ 2.17
SPTBN4-209ENST00000596411 TTC22Q5TAA0 569 aa28.59■■■□□ 2.17
SPTBN4-209ENST00000596411 DDIT3P35638 169 aa28.59■■■□□ 2.17
SPTBN4-209ENST00000596411 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
SPTBN4-209ENST00000596411 ADGRL3Q9HAR2 1447 aa28.58■■■□□ 2.17
SPTBN4-209ENST00000596411 MED1Q15648 1581 aaPredicted RBP28.58■■■□□ 2.17
SPTBN4-209ENST00000596411 GSPT1P15170 499 aaKnown RBP28.58■■■□□ 2.17
SPTBN4-209ENST00000596411 KIF2CQ99661 725 aa28.58■■■□□ 2.17
SPTBN4-209ENST00000596411 HMMRO75330 724 aa28.57■■■□□ 2.16
SPTBN4-209ENST00000596411 MEIS3Q99687 375 aa28.57■■■□□ 2.16
SPTBN4-209ENST00000596411 PHF8Q9UPP1 1060 aa28.57■■■□□ 2.16
SPTBN4-209ENST00000596411 PLPPR3Q6T4P5 718 aa28.56■■■□□ 2.16
SPTBN4-209ENST00000596411 ANKLE2Q86XL3 938 aa28.56■■■□□ 2.16
SPTBN4-209ENST00000596411 ABTB2Q8N961 1025 aa28.56■■■□□ 2.16
SPTBN4-209ENST00000596411 CIZ1Q9ULV3 898 aaPredicted RBP28.56■■■□□ 2.16
SPTBN4-209ENST00000596411 CCDC30Q5VVM6 783 aa28.55■■■□□ 2.16
SPTBN4-209ENST00000596411 STK31Q9BXU1 1019 aa28.55■■■□□ 2.16
SPTBN4-209ENST00000596411 MIS18AQ9NYP9 233 aa28.53■■■□□ 2.16
SPTBN4-209ENST00000596411 ADAMTSL3P82987 1691 aa28.52■■■□□ 2.16
SPTBN4-209ENST00000596411 G2E3Q7L622 706 aa28.52■■■□□ 2.16
SPTBN4-209ENST00000596411 CEMIPQ8WUJ3 1361 aa28.51■■■□□ 2.16
SPTBN4-209ENST00000596411 IP6K1Q92551 441 aa28.51■■■□□ 2.15
SPTBN4-209ENST00000596411 MCM4P33991 863 aa28.5■■■□□ 2.15
SPTBN4-209ENST00000596411 TAF7Q15545 349 aaPredicted RBP28.5■■■□□ 2.15
SPTBN4-209ENST00000596411 OSBPL3Q9H4L5 887 aa28.5■■■□□ 2.15
SPTBN4-209ENST00000596411 IL17REQ8NFR9 667 aa28.49■■■□□ 2.15
SPTBN4-209ENST00000596411 LMO7Q8WWI1 1683 aa28.48■■■□□ 2.15
SPTBN4-209ENST00000596411 NCAPD2Q15021 1401 aa28.48■■■□□ 2.15
SPTBN4-209ENST00000596411 FLIIQ13045 1269 aa28.48■■■□□ 2.15
SPTBN4-209ENST00000596411 KDM3BQ7LBC6 1761 aa28.47■■■□□ 2.15
SPTBN4-209ENST00000596411 GNAI2P04899 355 aa28.47■■■□□ 2.15
SPTBN4-209ENST00000596411 GNAI3P08754 354 aa28.47■■■□□ 2.15
SPTBN4-209ENST00000596411 KCNH5Q8NCM2 988 aa28.46■■■□□ 2.15
SPTBN4-209ENST00000596411 SETD1BQ9UPS6 1966 aaKnown RBP28.46■■■□□ 2.15
SPTBN4-209ENST00000596411 SLIT3O75094 1523 aa28.46■■■□□ 2.15
SPTBN4-209ENST00000596411 HOXB7P09629 217 aa28.44■■■□□ 2.14
SPTBN4-209ENST00000596411 NUTM2GQ5VZR2 741 aa28.44■■■□□ 2.14
SPTBN4-209ENST00000596411 TUBGCP6Q96RT7 1819 aa28.44■■■□□ 2.14
SPTBN4-209ENST00000596411 CHMP4AQ9BY43 222 aa28.44■■■□□ 2.14
SPTBN4-209ENST00000596411 LMTK3Q96Q04 1460 aa28.43■■■□□ 2.14
SPTBN4-209ENST00000596411 F6X3S4 739 aa28.43■■■□□ 2.14
SPTBN4-209ENST00000596411 K7ELQ4 463 aaPredicted RBP28.43■■■□□ 2.14
SPTBN4-209ENST00000596411 C16orf71Q8IYS4 520 aaPredicted RBP28.43■■■□□ 2.14
SPTBN4-209ENST00000596411 CAMTA1Q9Y6Y1 1673 aa28.43■■■□□ 2.14
SPTBN4-209ENST00000596411 OVOS2A0A0G2JMS6 1433 aa28.43■■■□□ 2.14
SPTBN4-209ENST00000596411 RABEP1Q15276 862 aa28.42■■■□□ 2.14
SPTBN4-209ENST00000596411 CASC1Q6TDU7 716 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms