RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 DEFB132Q7Z7B7 95 aa24.65■■□□□ 1.54
ZNF558-204ENST00000596172 RGPD1P0DJD0 1748 aa24.64■■□□□ 1.54
ZNF558-204ENST00000596172 PPP2R1AP30153 589 aa24.64■■□□□ 1.54
ZNF558-204ENST00000596172 DIAPH1O60610 1272 aaKnown RBP24.63■■□□□ 1.53
ZNF558-204ENST00000596172 PARD3Q8TEW0 1356 aa24.63■■□□□ 1.53
ZNF558-204ENST00000596172 APBA3O96018 575 aa24.62■■□□□ 1.53
ZNF558-204ENST00000596172 SPG7Q9UQ90 795 aa24.61■■□□□ 1.53
ZNF558-204ENST00000596172 PCDH11XQ9BZA7 1347 aa24.61■■□□□ 1.53
ZNF558-204ENST00000596172 PCDH11YQ9BZA8 1340 aa24.61■■□□□ 1.53
ZNF558-204ENST00000596172 KDRP35968 1356 aa24.6■■□□□ 1.53
ZNF558-204ENST00000596172 ZNF316A6NFI3 1004 aaPredicted RBP24.6■■□□□ 1.53
ZNF558-204ENST00000596172 EN1Q05925 392 aaPredicted RBP24.59■■□□□ 1.53
ZNF558-204ENST00000596172 CFAP53Q96M91 514 aa24.59■■□□□ 1.53
ZNF558-204ENST00000596172 CAMKK2Q96RR4 588 aa24.59■■□□□ 1.53
ZNF558-204ENST00000596172 TNS1Q9HBL0 1735 aaKnown RBP24.58■■□□□ 1.53
ZNF558-204ENST00000596172 PLSCR1O15162 318 aa24.58■■□□□ 1.53
ZNF558-204ENST00000596172 CYP27B1O15528 508 aa24.58■■□□□ 1.53
ZNF558-204ENST00000596172 RALBP1Q15311 655 aa24.58■■□□□ 1.53
ZNF558-204ENST00000596172 SULT6B1Q6IMI4 303 aa24.58■■□□□ 1.53
ZNF558-204ENST00000596172 COL3A1P02461 1466 aaPredicted RBP24.58■■□□□ 1.52
ZNF558-204ENST00000596172 PTF1AQ7RTS3 328 aa24.57■■□□□ 1.52
ZNF558-204ENST00000596172 AEBP1Q8IUX7 1158 aa24.57■■□□□ 1.52
ZNF558-204ENST00000596172 KCNQ2O43526 872 aa24.56■■□□□ 1.52
ZNF558-204ENST00000596172 NKX1-1Q15270 411 aaPredicted RBP24.56■■□□□ 1.52
ZNF558-204ENST00000596172 SBF2Q86WG5 1849 aa24.56■■□□□ 1.52
ZNF558-204ENST00000596172 AMOTQ4VCS5 1084 aa24.55■■□□□ 1.52
ZNF558-204ENST00000596172 ACSBG1Q96GR2 724 aa24.55■■□□□ 1.52
ZNF558-204ENST00000596172 SHANK3Q9BYB0 1731 aa24.55■■□□□ 1.52
ZNF558-204ENST00000596172 PLEKHO1Q53GL0 409 aaPredicted RBP24.54■■□□□ 1.52
ZNF558-204ENST00000596172 PKD1L3Q7Z443 1732 aa24.54■■□□□ 1.52
ZNF558-204ENST00000596172 EZH2Q15910 746 aaKnown RBP24.53■■□□□ 1.52
ZNF558-204ENST00000596172 IFNL2Q8IZJ0 200 aa24.52■■□□□ 1.52
ZNF558-204ENST00000596172 PHKG2P15735 406 aa24.51■■□□□ 1.51
ZNF558-204ENST00000596172 PRIM1P49642 420 aaKnown RBP24.51■■□□□ 1.51
ZNF558-204ENST00000596172 NUDCQ9Y266 331 aa24.51■■□□□ 1.51
ZNF558-204ENST00000596172 NHSQ6T4R5 1651 aa24.5■■□□□ 1.51
ZNF558-204ENST00000596172 U2SURPO15042 1029 aaKnown RBP24.48■■□□□ 1.51
ZNF558-204ENST00000596172 HMOX1P09601 288 aa24.48■■□□□ 1.51
ZNF558-204ENST00000596172 HSP90AB1P08238 724 aaKnown RBP24.46■■□□□ 1.51
ZNF558-204ENST00000596172 ZNF530Q6P9A1 599 aaPredicted RBP24.45■■□□□ 1.5
ZNF558-204ENST00000596172 PROM2Q8N271 834 aa24.45■■□□□ 1.5
ZNF558-204ENST00000596172 SYTL4Q96C24 671 aaPredicted RBP24.45■■□□□ 1.5
ZNF558-204ENST00000596172 RGPD3A6NKT7 1758 aaPredicted RBP24.44■■□□□ 1.5
ZNF558-204ENST00000596172 RGPD4Q7Z3J3 1758 aa24.44■■□□□ 1.5
ZNF558-204ENST00000596172 MYBBP1AQ9BQG0 1328 aaKnown RBP24.44■■□□□ 1.5
ZNF558-204ENST00000596172 PRKRIP1Q9H875 184 aaPredicted RBP24.44■■□□□ 1.5
ZNF558-204ENST00000596172 DCAF5Q96JK2 942 aa24.43■■□□□ 1.5
ZNF558-204ENST00000596172 TXNRD1Q16881 649 aa24.42■■□□□ 1.5
ZNF558-204ENST00000596172 C1orf141Q5JVX7 400 aa24.42■■□□□ 1.5
ZNF558-204ENST00000596172 FCHSD2O94868 740 aa24.41■■□□□ 1.5
ZNF558-204ENST00000596172 U2AF1L5P0DN76 240 aaPredicted RBP24.41■■□□□ 1.5
ZNF558-204ENST00000596172 U2AF1Q01081 240 aaKnown RBP eCLIP24.41■■□□□ 1.5
ZNF558-204ENST00000596172 DOT1LQ8TEK3 1739 aa24.41■■□□□ 1.5
ZNF558-204ENST00000596172 ERVV-2B6SEH9 535 aa24.4■■□□□ 1.5
ZNF558-204ENST00000596172 AKAP4Q5JQC9 854 aa24.4■■□□□ 1.5
ZNF558-204ENST00000596172 RSPH6AQ9H0K4 717 aa24.4■■□□□ 1.5
ZNF558-204ENST00000596172 MTHFSDQ2M296 383 aaKnown RBP24.39■■□□□ 1.49
ZNF558-204ENST00000596172 MPRIPQ6WCQ1 1025 aa24.39■■□□□ 1.49
ZNF558-204ENST00000596172 BTAF1O14981 1849 aa24.38■■□□□ 1.49
ZNF558-204ENST00000596172 RREB1Q92766 1687 aa24.38■■□□□ 1.49
ZNF558-204ENST00000596172 NBPF14Q5TI25 921 aa24.38■■□□□ 1.49
ZNF558-204ENST00000596172 PIGBQ92521 554 aa24.38■■□□□ 1.49
ZNF558-204ENST00000596172 SLC27A3Q5K4L6 730 aa24.37■■□□□ 1.49
ZNF558-204ENST00000596172 KAT6BQ8WYB5 2073 aa24.37■■□□□ 1.49
ZNF558-204ENST00000596172 PRKAR2BP31323 418 aa24.36■■□□□ 1.49
ZNF558-204ENST00000596172 TMOD3Q9NYL9 352 aa24.36■■□□□ 1.49
ZNF558-204ENST00000596172 GAS2L2Q8NHY3 880 aa24.35■■□□□ 1.49
ZNF558-204ENST00000596172 SMARCC1Q92922 1105 aaPredicted RBP24.35■■□□□ 1.49
ZNF558-204ENST00000596172 TOGARAM1Q9Y4F4 1720 aa24.35■■□□□ 1.49
ZNF558-204ENST00000596172 KDM6AO15550 1401 aaPredicted RBP24.35■■□□□ 1.49
ZNF558-204ENST00000596172 PHACTR3Q96KR7 559 aa24.33■■□□□ 1.49
ZNF558-204ENST00000596172 NUP188Q5SRE5 1749 aa24.32■■□□□ 1.48
ZNF558-204ENST00000596172 LRRC4BQ9NT99 713 aa24.32■■□□□ 1.48
ZNF558-204ENST00000596172 HMGB2P26583 209 aaKnown RBP24.31■■□□□ 1.48
ZNF558-204ENST00000596172 CABP4P57796 275 aa24.31■■□□□ 1.48
ZNF558-204ENST00000596172 PNNQ9H307 717 aaKnown RBP24.31■■□□□ 1.48
ZNF558-204ENST00000596172 R3HDM1Q15032 1099 aaKnown RBP24.3■■□□□ 1.48
ZNF558-204ENST00000596172 PALLDQ8WX93 1383 aa24.29■■□□□ 1.48
ZNF558-204ENST00000596172 RNMTO43148 476 aaKnown RBP24.29■■□□□ 1.48
ZNF558-204ENST00000596172 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
ZNF558-204ENST00000596172 ITGB4P16144 1822 aa24.28■■□□□ 1.48
ZNF558-204ENST00000596172 GNAT3A8MTJ3 354 aa24.28■■□□□ 1.48
ZNF558-204ENST00000596172 PLEKHF1Q96S99 279 aa24.28■■□□□ 1.48
ZNF558-204ENST00000596172 ANO8Q9HCE9 1232 aaPredicted RBP24.28■■□□□ 1.48
ZNF558-204ENST00000596172 ATG3Q9NT62 314 aa24.28■■□□□ 1.48
ZNF558-204ENST00000596172 CCNL1Q9UK58 526 aaPredicted RBP24.28■■□□□ 1.48
ZNF558-204ENST00000596172 ASAP1Q9ULH1 1129 aa24.28■■□□□ 1.48
ZNF558-204ENST00000596172 PSDA5PKW4 1024 aaPredicted RBP24.27■■□□□ 1.48
ZNF558-204ENST00000596172 NFATC2IPQ8NCF5 419 aa24.27■■□□□ 1.48
ZNF558-204ENST00000596172 STK32BQ9NY57 414 aa24.27■■□□□ 1.48
ZNF558-204ENST00000596172 MAP3K5Q99683 1374 aa24.27■■□□□ 1.48
ZNF558-204ENST00000596172 SLC15A2Q16348 729 aa24.26■■□□□ 1.47
ZNF558-204ENST00000596172 SLC52A2Q9HAB3 445 aa24.26■■□□□ 1.47
ZNF558-204ENST00000596172 LY75O60449 1722 aa24.25■■□□□ 1.47
ZNF558-204ENST00000596172 NEFMP07197 916 aa24.25■■□□□ 1.47
ZNF558-204ENST00000596172 ANP32CO43423 234 aa24.24■■□□□ 1.47
ZNF558-204ENST00000596172 LOC102724428A0A0B4J2F2 783 aa24.23■■□□□ 1.47
ZNF558-204ENST00000596172 HTATSF1O43719 755 aaKnown RBP24.23■■□□□ 1.47
ZNF558-204ENST00000596172 SIK1P57059 783 aa24.23■■□□□ 1.47
ZNF558-204ENST00000596172 IL17REQ8NFR9 667 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms