RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 EN1Q05925 392 aaPredicted RBP20.82■□□□□ 0.92
USE1-206ENST00000595101 PPP2R1AP30153 589 aa20.81■□□□□ 0.92
USE1-206ENST00000595101 APBA3O96018 575 aa20.8■□□□□ 0.92
USE1-206ENST00000595101 CYP27B1O15528 508 aa20.78■□□□□ 0.92
USE1-206ENST00000595101 EZH2Q15910 746 aaKnown RBP20.78■□□□□ 0.92
USE1-206ENST00000595101 SULT6B1Q6IMI4 303 aa20.78■□□□□ 0.92
USE1-206ENST00000595101 BCL9O00512 1426 aa20.78■□□□□ 0.92
USE1-206ENST00000595101 BAG6P46379 1132 aa20.77■□□□□ 0.92
USE1-206ENST00000595101 ZNF316A6NFI3 1004 aaPredicted RBP20.77■□□□□ 0.91
USE1-206ENST00000595101 DIAPH1O60610 1272 aaKnown RBP20.77■□□□□ 0.91
USE1-206ENST00000595101 HMOX1P09601 288 aa20.76■□□□□ 0.91
USE1-206ENST00000595101 CAMKK2Q96RR4 588 aa20.76■□□□□ 0.91
USE1-206ENST00000595101 BCL11BQ9C0K0 894 aaPredicted RBP20.76■□□□□ 0.91
USE1-206ENST00000595101 COL3A1P02461 1466 aaPredicted RBP20.76■□□□□ 0.91
USE1-206ENST00000595101 PARD3Q8TEW0 1356 aa20.75■□□□□ 0.91
USE1-206ENST00000595101 TNS1Q9HBL0 1735 aaKnown RBP20.75■□□□□ 0.91
USE1-206ENST00000595101 SHANK3Q9BYB0 1731 aa20.75■□□□□ 0.91
USE1-206ENST00000595101 SRCAPQ6ZRS2 3230 aa20.73■□□□□ 0.91
USE1-206ENST00000595101 PCDH11XQ9BZA7 1347 aa20.73■□□□□ 0.91
USE1-206ENST00000595101 PCDH11YQ9BZA8 1340 aa20.73■□□□□ 0.91
USE1-206ENST00000595101 RGPD1P0DJD0 1748 aa20.73■□□□□ 0.91
USE1-206ENST00000595101 PRIM1P49642 420 aaKnown RBP20.72■□□□□ 0.91
USE1-206ENST00000595101 SBF2Q86WG5 1849 aa20.72■□□□□ 0.91
USE1-206ENST00000595101 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
USE1-206ENST00000595101 SYTL4Q96C24 671 aaPredicted RBP20.72■□□□□ 0.91
USE1-206ENST00000595101 SPG7Q9UQ90 795 aa20.71■□□□□ 0.91
USE1-206ENST00000595101 KDRP35968 1356 aa20.71■□□□□ 0.91
USE1-206ENST00000595101 PROM2Q8N271 834 aa20.69■□□□□ 0.9
USE1-206ENST00000595101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.69■□□□□ 0.9
USE1-206ENST00000595101 PHKG2P15735 406 aa20.69■□□□□ 0.9
USE1-206ENST00000595101 PLSCR1O15162 318 aa20.67■□□□□ 0.9
USE1-206ENST00000595101 CFAP53Q96M91 514 aa20.67■□□□□ 0.9
USE1-206ENST00000595101 PKD1L3Q7Z443 1732 aa20.67■□□□□ 0.9
USE1-206ENST00000595101 RALBP1Q15311 655 aa20.67■□□□□ 0.9
USE1-206ENST00000595101 NKX1-1Q15270 411 aaPredicted RBP20.66■□□□□ 0.9
USE1-206ENST00000595101 PLEKHO1Q53GL0 409 aaPredicted RBP20.66■□□□□ 0.9
USE1-206ENST00000595101 IFNL2Q8IZJ0 200 aa20.66■□□□□ 0.9
USE1-206ENST00000595101 ZNF530Q6P9A1 599 aaPredicted RBP20.65■□□□□ 0.9
USE1-206ENST00000595101 NHSQ6T4R5 1651 aa20.65■□□□□ 0.9
USE1-206ENST00000595101 KAT6BQ8WYB5 2073 aa20.64■□□□□ 0.89
USE1-206ENST00000595101 MPRIPQ6WCQ1 1025 aa20.64■□□□□ 0.89
USE1-206ENST00000595101 AMOTQ4VCS5 1084 aa20.63■□□□□ 0.89
USE1-206ENST00000595101 PRKRIP1Q9H875 184 aaPredicted RBP20.63■□□□□ 0.89
USE1-206ENST00000595101 DOT1LQ8TEK3 1739 aa20.63■□□□□ 0.89
USE1-206ENST00000595101 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
USE1-206ENST00000595101 KCNQ4P56696 695 aa20.62■□□□□ 0.89
USE1-206ENST00000595101 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
USE1-206ENST00000595101 MTHFSDQ2M296 383 aaKnown RBP20.62■□□□□ 0.89
USE1-206ENST00000595101 TXNRD1Q16881 649 aa20.62■□□□□ 0.89
USE1-206ENST00000595101 PSDA5PKW4 1024 aaPredicted RBP20.61■□□□□ 0.89
USE1-206ENST00000595101 PIGBQ92521 554 aa20.61■□□□□ 0.89
USE1-206ENST00000595101 PHACTR3Q96KR7 559 aa20.61■□□□□ 0.89
USE1-206ENST00000595101 RSPH6AQ9H0K4 717 aa20.61■□□□□ 0.89
USE1-206ENST00000595101 LRRC4BQ9NT99 713 aa20.6■□□□□ 0.89
USE1-206ENST00000595101 NUDCQ9Y266 331 aa20.6■□□□□ 0.89
USE1-206ENST00000595101 MYBBP1AQ9BQG0 1328 aaKnown RBP20.6■□□□□ 0.89
USE1-206ENST00000595101 TOGARAM1Q9Y4F4 1720 aa20.59■□□□□ 0.89
USE1-206ENST00000595101 PRKAR2BP31323 418 aa20.59■□□□□ 0.89
USE1-206ENST00000595101 BTAF1O14981 1849 aa20.59■□□□□ 0.89
USE1-206ENST00000595101 PLEKHG2Q9H7P9 1386 aa20.59■□□□□ 0.89
USE1-206ENST00000595101 ANO8Q9HCE9 1232 aaPredicted RBP20.59■□□□□ 0.89
USE1-206ENST00000595101 KDM6AO15550 1401 aaPredicted RBP20.59■□□□□ 0.89
USE1-206ENST00000595101 R3HDM1Q15032 1099 aaKnown RBP20.58■□□□□ 0.89
USE1-206ENST00000595101 C1orf141Q5JVX7 400 aa20.57■□□□□ 0.88
USE1-206ENST00000595101 LGR6Q9HBX8 967 aa20.57■□□□□ 0.88
USE1-206ENST00000595101 DCAF5Q96JK2 942 aa20.57■□□□□ 0.88
USE1-206ENST00000595101 RREB1Q92766 1687 aa20.55■□□□□ 0.88
USE1-206ENST00000595101 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
USE1-206ENST00000595101 TMOD3Q9NYL9 352 aa20.54■□□□□ 0.88
USE1-206ENST00000595101 ASAP1Q9ULH1 1129 aa20.54■□□□□ 0.88
USE1-206ENST00000595101 FCHSD2O94868 740 aa20.54■□□□□ 0.88
USE1-206ENST00000595101 HSP90AB1P08238 724 aaKnown RBP20.54■□□□□ 0.88
USE1-206ENST00000595101 NUP188Q5SRE5 1749 aa20.54■□□□□ 0.88
USE1-206ENST00000595101 ERVV-2B6SEH9 535 aa20.52■□□□□ 0.88
USE1-206ENST00000595101 CCDC184Q52MB2 194 aa20.52■□□□□ 0.88
USE1-206ENST00000595101 NFATC2IPQ8NCF5 419 aa20.52■□□□□ 0.88
USE1-206ENST00000595101 PALLDQ8WX93 1383 aa20.51■□□□□ 0.87
USE1-206ENST00000595101 RGPD3A6NKT7 1758 aaPredicted RBP20.51■□□□□ 0.87
USE1-206ENST00000595101 RGPD4Q7Z3J3 1758 aa20.51■□□□□ 0.87
USE1-206ENST00000595101 RNMTO43148 476 aaKnown RBP20.51■□□□□ 0.87
USE1-206ENST00000595101 CABP4P57796 275 aa20.51■□□□□ 0.87
USE1-206ENST00000595101 ATG3Q9NT62 314 aa20.51■□□□□ 0.87
USE1-206ENST00000595101 ITGB4P16144 1822 aa20.5■□□□□ 0.87
USE1-206ENST00000595101 NBPF14Q5TI25 921 aa20.5■□□□□ 0.87
USE1-206ENST00000595101 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
USE1-206ENST00000595101 PDGFDQ9GZP0 370 aaPredicted RBP20.5■□□□□ 0.87
USE1-206ENST00000595101 CCNL1Q9UK58 526 aaPredicted RBP20.5■□□□□ 0.87
USE1-206ENST00000595101 ZNF827Q17R98 1081 aa20.49■□□□□ 0.87
USE1-206ENST00000595101 IL17REQ8NFR9 667 aa20.49■□□□□ 0.87
USE1-206ENST00000595101 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
USE1-206ENST00000595101 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
USE1-206ENST00000595101 GNAT3A8MTJ3 354 aa20.46■□□□□ 0.87
USE1-206ENST00000595101 SLC15A2Q16348 729 aa20.46■□□□□ 0.87
USE1-206ENST00000595101 SLC52A2Q9HAB3 445 aa20.46■□□□□ 0.87
USE1-206ENST00000595101 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
USE1-206ENST00000595101 SLC4A9Q96Q91 983 aa20.46■□□□□ 0.87
USE1-206ENST00000595101 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
USE1-206ENST00000595101 SMARCC1Q92922 1105 aaPredicted RBP20.45■□□□□ 0.86
USE1-206ENST00000595101 LOC102724428A0A0B4J2F2 783 aa20.44■□□□□ 0.86
USE1-206ENST00000595101 SIK1P57059 783 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms