RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 RGPD5Q99666 1765 aa4.88□□□□□ -1.63
VRK3-204ENST00000593912 ADAMTS7Q9UKP4 1686 aa4.87□□□□□ -1.63
VRK3-204ENST00000593912 LTBP1Q14766 1721 aa4.87□□□□□ -1.63
VRK3-204ENST00000593912 ITSN1Q15811 1721 aa4.87□□□□□ -1.63
VRK3-204ENST00000593912 VGFO15240 615 aaPredicted RBP4.87□□□□□ -1.63
VRK3-204ENST00000593912 POTEIP0CG38 1075 aa4.87□□□□□ -1.63
VRK3-204ENST00000593912 POTEJP0CG39 1038 aa4.87□□□□□ -1.63
VRK3-204ENST00000593912 ZNF219Q9P2Y4 722 aaPredicted RBP4.87□□□□□ -1.63
VRK3-204ENST00000593912 ARFGEF1Q9Y6D6 1849 aa4.87□□□□□ -1.63
VRK3-204ENST00000593912 CPDO75976 1380 aa4.87□□□□□ -1.63
VRK3-204ENST00000593912 ANKARQ7Z5J8 1434 aa4.87□□□□□ -1.63
VRK3-204ENST00000593912 MKI67P46013 3256 aaKnown RBP4.87□□□□□ -1.63
VRK3-204ENST00000593912 KIF13BQ9NQT8 1826 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 A0A0G2JLW4 131 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 EXOC5O00471 708 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 FCHSD2O94868 740 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 DGKZQ13574 1117 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 SLC27A3Q5K4L6 730 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 KANK4Q5T7N3 995 aaPredicted RBP4.86□□□□□ -1.63
VRK3-204ENST00000593912 NGDNQ8NEJ9 315 aaKnown RBP4.86□□□□□ -1.63
VRK3-204ENST00000593912 GCC1Q96CN9 775 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 ERBB3P21860 1342 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 ABCC11Q96J66 1382 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 ANKRD30BQ9BXX2 1392 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 TIAM2Q8IVF5 1701 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 TOGARAM1Q9Y4F4 1720 aa4.86□□□□□ -1.63
VRK3-204ENST00000593912 POTECB2RU33 542 aa4.85□□□□□ -1.63
VRK3-204ENST00000593912 VEGFAP15692 232 aaPredicted RBP4.85□□□□□ -1.63
VRK3-204ENST00000593912 AMIGO3Q86WK7 504 aa4.85□□□□□ -1.63
VRK3-204ENST00000593912 ADGRF5Q8IZF2 1346 aa4.85□□□□□ -1.63
VRK3-204ENST00000593912 SPATA31E1Q6ZUB1 1445 aa4.85□□□□□ -1.63
VRK3-204ENST00000593912 YTHDC2Q9H6S0 1430 aaKnown RBP4.85□□□□□ -1.63
VRK3-204ENST00000593912 ABCC6O95255 1503 aa4.85□□□□□ -1.63
VRK3-204ENST00000593912 C5P01031 1676 aa4.85□□□□□ -1.63
VRK3-204ENST00000593912 CCDC88AQ3V6T2 1871 aa4.84□□□□□ -1.63
VRK3-204ENST00000593912 THSD7BQ9C0I4 1608 aa4.84□□□□□ -1.63
VRK3-204ENST00000593912 NUP155O75694 1391 aa4.84□□□□□ -1.63
VRK3-204ENST00000593912 RASSF7Q02833 373 aa4.84□□□□□ -1.63
VRK3-204ENST00000593912 UNC80Q8N2C7 3258 aa4.84□□□□□ -1.64
VRK3-204ENST00000593912 TAF1LQ8IZX4 1826 aa4.83□□□□□ -1.64
VRK3-204ENST00000593912 DOT1LQ8TEK3 1739 aa4.83□□□□□ -1.64
VRK3-204ENST00000593912 MEGF6O75095 1541 aa4.83□□□□□ -1.64
VRK3-204ENST00000593912 WDR17Q8IZU2 1322 aa4.83□□□□□ -1.64
VRK3-204ENST00000593912 WDR33Q9C0J8 1336 aaKnown RBP4.83□□□□□ -1.64
VRK3-204ENST00000593912 DPEP1P16444 411 aa4.83□□□□□ -1.64
VRK3-204ENST00000593912 MAP2K1Q02750 393 aaPredicted RBP4.83□□□□□ -1.64
VRK3-204ENST00000593912 CHADLQ6NUI6 762 aa4.83□□□□□ -1.64
VRK3-204ENST00000593912 PRAM1Q96QH2 718 aa4.83□□□□□ -1.64
VRK3-204ENST00000593912 CDCA7Q9BWT1 371 aaPredicted RBP4.83□□□□□ -1.64
VRK3-204ENST00000593912 CCNL1Q9UK58 526 aaPredicted RBP4.83□□□□□ -1.64
VRK3-204ENST00000593912 AXIN2Q9Y2T1 843 aa4.83□□□□□ -1.64
VRK3-204ENST00000593912 VPS8Q8N3P4 1428 aa4.82□□□□□ -1.64
VRK3-204ENST00000593912 UBR3Q6ZT12 1888 aa4.82□□□□□ -1.64
VRK3-204ENST00000593912 PASKQ96RG2 1323 aa4.82□□□□□ -1.64
VRK3-204ENST00000593912 GLTPD2A6NH11 291 aa4.82□□□□□ -1.64
VRK3-204ENST00000593912 PHF14O94880 888 aa4.82□□□□□ -1.64
VRK3-204ENST00000593912 GCP02774 474 aa4.82□□□□□ -1.64
VRK3-204ENST00000593912 GRM1Q13255 1194 aa4.82□□□□□ -1.64
VRK3-204ENST00000593912 PPIP5K1Q6PFW1 1433 aa4.81□□□□□ -1.64
VRK3-204ENST00000593912 NSD2O96028 1365 aa4.81□□□□□ -1.64
VRK3-204ENST00000593912 RASSF10A6NK89 507 aa4.81□□□□□ -1.64
VRK3-204ENST00000593912 TMEM88BA6NKF7 163 aa4.81□□□□□ -1.64
VRK3-204ENST00000593912 DEFB115Q30KQ5 88 aa4.81□□□□□ -1.64
VRK3-204ENST00000593912 NBPF15Q8N660 670 aa4.81□□□□□ -1.64
VRK3-204ENST00000593912 ABTB2Q8N961 1025 aa4.81□□□□□ -1.64
VRK3-204ENST00000593912 SYTL4Q96C24 671 aaPredicted RBP4.81□□□□□ -1.64
VRK3-204ENST00000593912 C4BP0C0L5 1744 aa4.8□□□□□ -1.64
VRK3-204ENST00000593912 MINK1Q8N4C8 1332 aaPredicted RBP4.8□□□□□ -1.64
VRK3-204ENST00000593912 CSB-PGBD3P0DP91 1061 aa4.8□□□□□ -1.64
VRK3-204ENST00000593912 KCNA3P22001 575 aa4.8□□□□□ -1.64
VRK3-204ENST00000593912 DCAF5Q96JK2 942 aa4.8□□□□□ -1.64
VRK3-204ENST00000593912 BEGAINQ9BUH8 593 aa4.8□□□□□ -1.64
VRK3-204ENST00000593912 CARD10Q9BWT7 1032 aa4.8□□□□□ -1.64
VRK3-204ENST00000593912 KDM6AO15550 1401 aaPredicted RBP4.8□□□□□ -1.64
VRK3-204ENST00000593912 RPGRIP1LQ68CZ1 1315 aa4.79□□□□□ -1.64
VRK3-204ENST00000593912 SLIT3O75094 1523 aa4.79□□□□□ -1.64
VRK3-204ENST00000593912 AOC2O75106 756 aa4.79□□□□□ -1.64
VRK3-204ENST00000593912 MMP10P09238 476 aa4.79□□□□□ -1.64
VRK3-204ENST00000593912 PRIM1P49642 420 aaKnown RBP4.79□□□□□ -1.64
VRK3-204ENST00000593912 TGFB2P61812 414 aa4.79□□□□□ -1.64
VRK3-204ENST00000593912 CYP4F22Q6NT55 531 aa4.79□□□□□ -1.64
VRK3-204ENST00000593912 PAXIP1Q6ZW49 1069 aaPredicted RBP4.79□□□□□ -1.64
VRK3-204ENST00000593912 TRIOBPQ9H2D6 2365 aa4.79□□□□□ -1.64
VRK3-204ENST00000593912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.78□□□□□ -1.64
VRK3-204ENST00000593912 ITGBL1O95965 494 aaPredicted RBP4.78□□□□□ -1.64
VRK3-204ENST00000593912 SIRT1Q96EB6 747 aa4.78□□□□□ -1.64
VRK3-204ENST00000593912 CAPNS2Q96L46 248 aa4.78□□□□□ -1.64
VRK3-204ENST00000593912 POGKQ9P215 609 aa4.78□□□□□ -1.64
VRK3-204ENST00000593912 ABT1Q9ULW3 272 aaKnown RBP4.78□□□□□ -1.64
VRK3-204ENST00000593912 PIK3C2GO75747 1445 aa4.78□□□□□ -1.64
VRK3-204ENST00000593912 CPSF1Q10570 1443 aaKnown RBP4.78□□□□□ -1.64
VRK3-204ENST00000593912 CCDC7Q96M83 1385 aa4.78□□□□□ -1.64
VRK3-204ENST00000593912 VCANP13611 3396 aa4.78□□□□□ -1.65
VRK3-204ENST00000593912 ACEP12821 1306 aa4.77□□□□□ -1.65
VRK3-204ENST00000593912 SPTBN5Q9NRC6 3674 aaKnown RBP4.77□□□□□ -1.65
VRK3-204ENST00000593912 WASLO00401 505 aaPredicted RBP4.77□□□□□ -1.65
VRK3-204ENST00000593912 MNX1P50219 401 aaPredicted RBP4.77□□□□□ -1.65
VRK3-204ENST00000593912 DALRD3Q5D0E6 543 aaKnown RBP4.77□□□□□ -1.65
VRK3-204ENST00000593912 NLRP13Q86W25 1043 aa4.77□□□□□ -1.65
VRK3-204ENST00000593912 FLAD1Q8NFF5 587 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms