RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 EMILIN1Q9Y6C2 1016 aa16.55■□□□□ 0.24
SOD3-202ENST00000593742 BCL9O00512 1426 aa16.54■□□□□ 0.24
SOD3-202ENST00000593742 TNNT2P45379 298 aaPredicted RBP16.54■□□□□ 0.24
SOD3-202ENST00000593742 FLT4P35916 1363 aa16.53■□□□□ 0.24
SOD3-202ENST00000593742 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
SOD3-202ENST00000593742 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
SOD3-202ENST00000593742 MEGF6O75095 1541 aa16.52■□□□□ 0.24
SOD3-202ENST00000593742 PLSCR1O15162 318 aa16.52■□□□□ 0.24
SOD3-202ENST00000593742 PANK3Q9H999 370 aa16.52■□□□□ 0.24
SOD3-202ENST00000593742 NHSQ6T4R5 1651 aa16.52■□□□□ 0.23
SOD3-202ENST00000593742 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
SOD3-202ENST00000593742 LRP5O75197 1615 aa16.51■□□□□ 0.23
SOD3-202ENST00000593742 RGPD3A6NKT7 1758 aaPredicted RBP16.51■□□□□ 0.23
SOD3-202ENST00000593742 RGPD4Q7Z3J3 1758 aa16.51■□□□□ 0.23
SOD3-202ENST00000593742 INSRP06213 1382 aa16.51■□□□□ 0.23
SOD3-202ENST00000593742 C1QBPQ07021 282 aaKnown RBP16.5■□□□□ 0.23
SOD3-202ENST00000593742 TXNRD1Q16881 649 aa16.5■□□□□ 0.23
SOD3-202ENST00000593742 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
SOD3-202ENST00000593742 RAPGEF4Q8WZA2 1011 aa16.5■□□□□ 0.23
SOD3-202ENST00000593742 ANO8Q9HCE9 1232 aaPredicted RBP16.5■□□□□ 0.23
SOD3-202ENST00000593742 MAP2P11137 1827 aaKnown RBP16.48■□□□□ 0.23
SOD3-202ENST00000593742 TATP17735 454 aaPredicted RBP16.48■□□□□ 0.23
SOD3-202ENST00000593742 PROM2Q8N271 834 aa16.48■□□□□ 0.23
SOD3-202ENST00000593742 KIF24Q5T7B8 1368 aa16.48■□□□□ 0.23
SOD3-202ENST00000593742 BTAF1O14981 1849 aa16.47■□□□□ 0.23
SOD3-202ENST00000593742 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
SOD3-202ENST00000593742 DOT1LQ8TEK3 1739 aa16.46■□□□□ 0.23
SOD3-202ENST00000593742 SHANK3Q9BYB0 1731 aa16.46■□□□□ 0.23
SOD3-202ENST00000593742 ANKRD26Q9UPS8 1709 aa16.46■□□□□ 0.23
SOD3-202ENST00000593742 STK32BQ9NY57 414 aa16.46■□□□□ 0.23
SOD3-202ENST00000593742 PRIM1P49642 420 aaKnown RBP16.45■□□□□ 0.22
SOD3-202ENST00000593742 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
SOD3-202ENST00000593742 KIF7Q2M1P5 1343 aa16.44■□□□□ 0.22
SOD3-202ENST00000593742 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
SOD3-202ENST00000593742 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
SOD3-202ENST00000593742 WASHC2AQ641Q2 1341 aa16.43■□□□□ 0.22
SOD3-202ENST00000593742 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
SOD3-202ENST00000593742 PDGFDQ9GZP0 370 aaPredicted RBP16.42■□□□□ 0.22
SOD3-202ENST00000593742 PCDH11XQ9BZA7 1347 aa16.42■□□□□ 0.22
SOD3-202ENST00000593742 PCDH11YQ9BZA8 1340 aa16.42■□□□□ 0.22
SOD3-202ENST00000593742 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
SOD3-202ENST00000593742 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
SOD3-202ENST00000593742 EYA1Q99502 592 aa16.41■□□□□ 0.22
SOD3-202ENST00000593742 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
SOD3-202ENST00000593742 NSD2O96028 1365 aa16.4■□□□□ 0.22
SOD3-202ENST00000593742 KCNQ4P56696 695 aa16.4■□□□□ 0.22
SOD3-202ENST00000593742 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
SOD3-202ENST00000593742 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
SOD3-202ENST00000593742 SPON1Q9HCB6 807 aa16.4■□□□□ 0.22
SOD3-202ENST00000593742 LRRC4BQ9NT99 713 aa16.38■□□□□ 0.21
SOD3-202ENST00000593742 CASZ1Q86V15 1759 aa16.37■□□□□ 0.21
SOD3-202ENST00000593742 CYP27B1O15528 508 aa16.37■□□□□ 0.21
SOD3-202ENST00000593742 ZNF827Q17R98 1081 aa16.37■□□□□ 0.21
SOD3-202ENST00000593742 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
SOD3-202ENST00000593742 ATF5Q9Y2D1 282 aaPredicted RBP16.37■□□□□ 0.21
SOD3-202ENST00000593742 SPG7Q9UQ90 795 aa16.36■□□□□ 0.21
SOD3-202ENST00000593742 PAPPAQ13219 1627 aa16.36■□□□□ 0.21
SOD3-202ENST00000593742 PKD1L3Q7Z443 1732 aa16.36■□□□□ 0.21
SOD3-202ENST00000593742 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
SOD3-202ENST00000593742 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
SOD3-202ENST00000593742 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
SOD3-202ENST00000593742 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
SOD3-202ENST00000593742 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
SOD3-202ENST00000593742 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
SOD3-202ENST00000593742 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.2
SOD3-202ENST00000593742 LY75O60449 1722 aa16.32■□□□□ 0.2
SOD3-202ENST00000593742 TFCP2L1Q9NZI6 479 aa16.32■□□□□ 0.2
SOD3-202ENST00000593742 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
SOD3-202ENST00000593742 IGSF1Q8N6C5 1336 aa16.31■□□□□ 0.2
SOD3-202ENST00000593742 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
SOD3-202ENST00000593742 AEBP1Q8IUX7 1158 aa16.3■□□□□ 0.2
SOD3-202ENST00000593742 IFNL2Q8IZJ0 200 aa16.3■□□□□ 0.2
SOD3-202ENST00000593742 MTFR1LQ9H019 292 aa16.3■□□□□ 0.2
SOD3-202ENST00000593742 ITGB4P16144 1822 aa16.3■□□□□ 0.2
SOD3-202ENST00000593742 PHKG2P15735 406 aa16.29■□□□□ 0.2
SOD3-202ENST00000593742 PTGER2P43116 358 aa16.28■□□□□ 0.2
SOD3-202ENST00000593742 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
SOD3-202ENST00000593742 PIGBQ92521 554 aa16.28■□□□□ 0.2
SOD3-202ENST00000593742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.28■□□□□ 0.2
SOD3-202ENST00000593742 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
SOD3-202ENST00000593742 PNPLA7Q6ZV29 1317 aa16.27■□□□□ 0.2
SOD3-202ENST00000593742 TUBGCP6Q96RT7 1819 aa16.27■□□□□ 0.2
SOD3-202ENST00000593742 MTHFSP49914 203 aa16.27■□□□□ 0.2
SOD3-202ENST00000593742 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
SOD3-202ENST00000593742 PLEKHO1Q53GL0 409 aaPredicted RBP16.27■□□□□ 0.2
SOD3-202ENST00000593742 ZNF530Q6P9A1 599 aaPredicted RBP16.27■□□□□ 0.2
SOD3-202ENST00000593742 PER1O15534 1290 aaPredicted RBP16.26■□□□□ 0.19
SOD3-202ENST00000593742 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
SOD3-202ENST00000593742 C5P01031 1676 aa16.25■□□□□ 0.19
SOD3-202ENST00000593742 IL13P35225 146 aa16.25■□□□□ 0.19
SOD3-202ENST00000593742 SMARCC1Q92922 1105 aaPredicted RBP16.25■□□□□ 0.19
SOD3-202ENST00000593742 HMOX1P09601 288 aa16.24■□□□□ 0.19
SOD3-202ENST00000593742 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
SOD3-202ENST00000593742 QSER1Q2KHR3 1735 aa16.23■□□□□ 0.19
SOD3-202ENST00000593742 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
SOD3-202ENST00000593742 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
SOD3-202ENST00000593742 ARXQ96QS3 562 aa16.23■□□□□ 0.19
SOD3-202ENST00000593742 FHDC1Q9C0D6 1143 aaPredicted RBP16.23■□□□□ 0.19
SOD3-202ENST00000593742 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
SOD3-202ENST00000593742 PHF14O94880 888 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms