RNA–Protein interactions for RNA: ENST00000593739.1

CPAMD8-205, Transcript of C3 and PZP like, alpha-2-macroglobulin domain containing 8, human

TSL 4

Gene CPAMD8, Length 564 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPAMD8-205	ENST00000593739	NHS	Q6T4R5	1651 aa		32.72	■■■□□ 2.83
CPAMD8-205	ENST00000593739	PER1	O15534	1290 aa	Predicted RBP	32.71	■■■□□ 2.83
CPAMD8-205	ENST00000593739	DDX54	Q8TDD1	881 aa	Known RBP	32.7	■■■□□ 2.83
CPAMD8-205	ENST00000593739	TAT	P17735	454 aa	Predicted RBP	32.69	■■■□□ 2.82
CPAMD8-205	ENST00000593739	KCNQ2	O43526	872 aa		32.68	■■■□□ 2.82
CPAMD8-205	ENST00000593739	NUP188	Q5SRE5	1749 aa		32.67	■■■□□ 2.82
CPAMD8-205	ENST00000593739	ACSBG1	Q96GR2	724 aa		32.65	■■■□□ 2.82
CPAMD8-205	ENST00000593739	SHANK3	Q9BYB0	1731 aa		32.65	■■■□□ 2.82
CPAMD8-205	ENST00000593739	EIF4A2	Q14240	407 aa	Known RBP	32.64	■■■□□ 2.82
CPAMD8-205	ENST00000593739	EYA1	Q99502	592 aa		32.64	■■■□□ 2.82
CPAMD8-205	ENST00000593739	NPC1L1	Q9UHC9	1359 aa		32.63	■■■□□ 2.81
CPAMD8-205	ENST00000593739	NBPF14	Q5TI25	921 aa		32.63	■■■□□ 2.81
CPAMD8-205	ENST00000593739	PSD	A5PKW4	1024 aa	Predicted RBP	32.62	■■■□□ 2.81
CPAMD8-205	ENST00000593739	R3HDM1	Q15032	1099 aa	Known RBP	32.62	■■■□□ 2.81
CPAMD8-205	ENST00000593739	PLEKHG2	Q9H7P9	1386 aa		32.61	■■■□□ 2.81
CPAMD8-205	ENST00000593739	PCDH11X	Q9BZA7	1347 aa		32.61	■■■□□ 2.81
CPAMD8-205	ENST00000593739	PCDH11Y	Q9BZA8	1340 aa		32.61	■■■□□ 2.81
CPAMD8-205	ENST00000593739	PROM2	Q8N271	834 aa		32.59	■■■□□ 2.81
CPAMD8-205	ENST00000593739	IGSF1	Q8N6C5	1336 aa		32.57	■■■□□ 2.8
CPAMD8-205	ENST00000593739	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.57	■■■□□ 2.8
CPAMD8-205	ENST00000593739	TXNRD1	Q16881	649 aa		32.56	■■■□□ 2.8
CPAMD8-205	ENST00000593739	PKD1L3	Q7Z443	1732 aa		32.56	■■■□□ 2.8
CPAMD8-205	ENST00000593739	BTAF1	O14981	1849 aa		32.54	■■■□□ 2.8
CPAMD8-205	ENST00000593739	PRIM1	P49642	420 aa	Known RBP	32.53	■■■□□ 2.8
CPAMD8-205	ENST00000593739	SPG7	Q9UQ90	795 aa		32.53	■■■□□ 2.8
CPAMD8-205	ENST00000593739	CYP27B1	O15528	508 aa		32.52	■■■□□ 2.8
CPAMD8-205	ENST00000593739	CC2D1B	Q5T0F9	858 aa	Known RBP	32.52	■■■□□ 2.8
CPAMD8-205	ENST00000593739	DOT1L	Q8TEK3	1739 aa		32.51	■■■□□ 2.8
CPAMD8-205	ENST00000593739	LRP5	O75197	1615 aa		32.51	■■■□□ 2.79
CPAMD8-205	ENST00000593739	SYTL4	Q96C24	671 aa	Predicted RBP	32.49	■■■□□ 2.79
CPAMD8-205	ENST00000593739	MTHFS	P49914	203 aa		32.47	■■■□□ 2.79
CPAMD8-205	ENST00000593739	NKX1-1	Q15270	411 aa	Predicted RBP	32.47	■■■□□ 2.79
CPAMD8-205	ENST00000593739	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.47	■■■□□ 2.79
CPAMD8-205	ENST00000593739	IL13	P35225	146 aa		32.46	■■■□□ 2.79
CPAMD8-205	ENST00000593739	SLC27A3	Q5K4L6	730 aa		32.44	■■■□□ 2.78
CPAMD8-205	ENST00000593739	KDR	P35968	1356 aa		32.43	■■■□□ 2.78
CPAMD8-205	ENST00000593739	IFNL2	Q8IZJ0	200 aa		32.41	■■■□□ 2.78
CPAMD8-205	ENST00000593739	STK32B	Q9NY57	414 aa		32.41	■■■□□ 2.78
CPAMD8-205	ENST00000593739	PAPPA	Q13219	1627 aa		32.4	■■■□□ 2.78
CPAMD8-205	ENST00000593739	PHKG2	P15735	406 aa		32.4	■■■□□ 2.78
CPAMD8-205	ENST00000593739	SLC15A2	Q16348	729 aa		32.39	■■■□□ 2.78
CPAMD8-205	ENST00000593739	LRRC4B	Q9NT99	713 aa		32.39	■■■□□ 2.78
CPAMD8-205	ENST00000593739	KAT6B	Q8WYB5	2073 aa		32.39	■■■□□ 2.78
CPAMD8-205	ENST00000593739	AMOT	Q4VCS5	1084 aa		32.38	■■■□□ 2.77
CPAMD8-205	ENST00000593739	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.37	■■■□□ 2.77
CPAMD8-205	ENST00000593739	AEBP1	Q8IUX7	1158 aa		32.37	■■■□□ 2.77
CPAMD8-205	ENST00000593739	SULT6B1	Q6IMI4	303 aa		32.36	■■■□□ 2.77
CPAMD8-205	ENST00000593739	TOGARAM1	Q9Y4F4	1720 aa		32.36	■■■□□ 2.77
CPAMD8-205	ENST00000593739	LY75	O60449	1722 aa		32.34	■■■□□ 2.77
CPAMD8-205	ENST00000593739	DIAPH1	O60610	1272 aa	Known RBP	32.33	■■■□□ 2.77
CPAMD8-205	ENST00000593739	MPRIP	Q6WCQ1	1025 aa		32.33	■■■□□ 2.77
CPAMD8-205	ENST00000593739	CASZ1	Q86V15	1759 aa		32.32	■■■□□ 2.76
CPAMD8-205	ENST00000593739	COL3A1	P02461	1466 aa	Predicted RBP	32.31	■■■□□ 2.76
CPAMD8-205	ENST00000593739	HSP90AB1	P08238	724 aa	Known RBP	32.31	■■■□□ 2.76
CPAMD8-205	ENST00000593739	CNGB1	Q14028	1251 aa	Predicted RBP	32.3	■■■□□ 2.76
CPAMD8-205	ENST00000593739	HMGB2	P26583	209 aa	Known RBP	32.29	■■■□□ 2.76
CPAMD8-205	ENST00000593739	PIGB	Q92521	554 aa		32.29	■■■□□ 2.76
CPAMD8-205	ENST00000593739	SMARCC1	Q92922	1105 aa	Predicted RBP	32.29	■■■□□ 2.76
CPAMD8-205	ENST00000593739	SPON1	Q9HCB6	807 aa		32.29	■■■□□ 2.76
CPAMD8-205	ENST00000593739	CCNL1	Q9UK58	526 aa	Predicted RBP	32.29	■■■□□ 2.76
CPAMD8-205	ENST00000593739	PALLD	Q8WX93	1383 aa		32.29	■■■□□ 2.76
CPAMD8-205	ENST00000593739	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.28	■■■□□ 2.76
CPAMD8-205	ENST00000593739	AKT1S1	Q96B36	256 aa		32.28	■■■□□ 2.76
CPAMD8-205	ENST00000593739	DCAF5	Q96JK2	942 aa		32.28	■■■□□ 2.76
CPAMD8-205	ENST00000593739	ZNF827	Q17R98	1081 aa		32.27	■■■□□ 2.76
CPAMD8-205	ENST00000593739	TMOD3	Q9NYL9	352 aa		32.27	■■■□□ 2.76
CPAMD8-205	ENST00000593739	ITGB4	P16144	1822 aa		32.26	■■■□□ 2.76
CPAMD8-205	ENST00000593739	ERVV-2	B6SEH9	535 aa		32.25	■■■□□ 2.75
CPAMD8-205	ENST00000593739	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.25	■■■□□ 2.75
CPAMD8-205	ENST00000593739	KCNQ4	P56696	695 aa		32.23	■■■□□ 2.75
CPAMD8-205	ENST00000593739	C1orf141	Q5JVX7	400 aa		32.23	■■■□□ 2.75
CPAMD8-205	ENST00000593739	CFAP53	Q96M91	514 aa		32.22	■■■□□ 2.75
CPAMD8-205	ENST00000593739	KDM6A	O15550	1401 aa	Predicted RBP	32.21	■■■□□ 2.75
CPAMD8-205	ENST00000593739	HMOX1	P09601	288 aa		32.21	■■■□□ 2.75
CPAMD8-205	ENST00000593739	PPP2R1A	P30153	589 aa		32.21	■■■□□ 2.75
CPAMD8-205	ENST00000593739	QSER1	Q2KHR3	1735 aa		32.18	■■■□□ 2.74
CPAMD8-205	ENST00000593739	MTFR1L	Q9H019	292 aa		32.18	■■■□□ 2.74
CPAMD8-205	ENST00000593739	ZBTB7A	O95365	584 aa		32.17	■■■□□ 2.74
CPAMD8-205	ENST00000593739	AKAP4	Q5JQC9	854 aa		32.17	■■■□□ 2.74
CPAMD8-205	ENST00000593739	TFCP2L1	Q9NZI6	479 aa		32.17	■■■□□ 2.74
CPAMD8-205	ENST00000593739	U2SURP	O15042	1029 aa	Known RBP	32.15	■■■□□ 2.74
CPAMD8-205	ENST00000593739	ASAP1	Q9ULH1	1129 aa		32.15	■■■□□ 2.74
CPAMD8-205	ENST00000593739	LOC102724428	A0A0B4J2F2	783 aa		32.14	■■■□□ 2.74
CPAMD8-205	ENST00000593739	ZEB1	P37275	1124 aa	Predicted RBP	32.14	■■■□□ 2.74
CPAMD8-205	ENST00000593739	SIK1	P57059	783 aa		32.14	■■■□□ 2.74
CPAMD8-205	ENST00000593739	ATG3	Q9NT62	314 aa		32.14	■■■□□ 2.74
CPAMD8-205	ENST00000593739	PNPLA7	Q6ZV29	1317 aa		32.14	■■■□□ 2.74
CPAMD8-205	ENST00000593739	C5	P01031	1676 aa		32.14	■■■□□ 2.74
CPAMD8-205	ENST00000593739	CABP4	P57796	275 aa		32.13	■■■□□ 2.73
CPAMD8-205	ENST00000593739	SLC16A10	Q8TF71	515 aa		32.13	■■■□□ 2.73
CPAMD8-205	ENST00000593739	PTGER2	P43116	358 aa		32.12	■■■□□ 2.73
CPAMD8-205	ENST00000593739	NUDC	Q9Y266	331 aa		32.12	■■■□□ 2.73
CPAMD8-205	ENST00000593739	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.11	■■■□□ 2.73
CPAMD8-205	ENST00000593739	MTHFSD	Q2M296	383 aa	Known RBP	32.1	■■■□□ 2.73
CPAMD8-205	ENST00000593739	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.09	■■■□□ 2.73
CPAMD8-205	ENST00000593739	SGIP1	Q9BQI5	828 aa		32.08	■■■□□ 2.73
CPAMD8-205	ENST00000593739	TAF1L	Q8IZX4	1826 aa		32.07	■■■□□ 2.73
CPAMD8-205	ENST00000593739	TUBGCP6	Q96RT7	1819 aa		32.06	■■■□□ 2.72
CPAMD8-205	ENST00000593739	C4B	P0C0L5	1744 aa		32.06	■■■□□ 2.72
CPAMD8-205	ENST00000593739	NFATC2IP	Q8NCF5	419 aa		32.05	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms