RNA–Protein interactions for RNA: ENST00000592967.5

SPC24-207, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 3

Gene SPC24, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-207ENST00000592967 BCL9O00512 1426 aa22.07■■□□□ 1.12
SPC24-207ENST00000592967 EN1Q05925 392 aaPredicted RBP22.07■■□□□ 1.12
SPC24-207ENST00000592967 ZNF316A6NFI3 1004 aaPredicted RBP22.06■■□□□ 1.12
SPC24-207ENST00000592967 DIAPH1O60610 1272 aaKnown RBP22.06■■□□□ 1.12
SPC24-207ENST00000592967 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
SPC24-207ENST00000592967 BCL11BQ9C0K0 894 aaPredicted RBP22.06■■□□□ 1.12
SPC24-207ENST00000592967 KCNQ2O43526 872 aa22.05■■□□□ 1.12
SPC24-207ENST00000592967 SULT6B1Q6IMI4 303 aa22.05■■□□□ 1.12
SPC24-207ENST00000592967 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
SPC24-207ENST00000592967 RGPD1P0DJD0 1748 aa22.03■■□□□ 1.12
SPC24-207ENST00000592967 SPG7Q9UQ90 795 aa22.03■■□□□ 1.12
SPC24-207ENST00000592967 CYP27B1O15528 508 aa22.02■■□□□ 1.12
SPC24-207ENST00000592967 EZH2Q15910 746 aaKnown RBP22.02■■□□□ 1.12
SPC24-207ENST00000592967 CAMKK2Q96RR4 588 aa22.02■■□□□ 1.12
SPC24-207ENST00000592967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.02■■□□□ 1.12
SPC24-207ENST00000592967 SBF2Q86WG5 1849 aa22.01■■□□□ 1.11
SPC24-207ENST00000592967 PARD3Q8TEW0 1356 aa22■■□□□ 1.11
SPC24-207ENST00000592967 CFAP53Q96M91 514 aa22■■□□□ 1.11
SPC24-207ENST00000592967 PCDH11XQ9BZA7 1347 aa22■■□□□ 1.11
SPC24-207ENST00000592967 PCDH11YQ9BZA8 1340 aa22■■□□□ 1.11
SPC24-207ENST00000592967 TNS1Q9HBL0 1735 aaKnown RBP22■■□□□ 1.11
SPC24-207ENST00000592967 HMOX1P09601 288 aa21.99■■□□□ 1.11
SPC24-207ENST00000592967 PRIM1P49642 420 aaKnown RBP21.99■■□□□ 1.11
SPC24-207ENST00000592967 PLSCR1O15162 318 aa21.98■■□□□ 1.11
SPC24-207ENST00000592967 RALBP1Q15311 655 aa21.98■■□□□ 1.11
SPC24-207ENST00000592967 PLEKHO1Q53GL0 409 aaPredicted RBP21.98■■□□□ 1.11
SPC24-207ENST00000592967 SHANK3Q9BYB0 1731 aa21.97■■□□□ 1.11
SPC24-207ENST00000592967 COL3A1P02461 1466 aaPredicted RBP21.97■■□□□ 1.11
SPC24-207ENST00000592967 U2SURPO15042 1029 aaKnown RBP21.97■■□□□ 1.11
SPC24-207ENST00000592967 KDRP35968 1356 aa21.97■■□□□ 1.11
SPC24-207ENST00000592967 NKX1-1Q15270 411 aaPredicted RBP21.96■■□□□ 1.11
SPC24-207ENST00000592967 SYTL4Q96C24 671 aaPredicted RBP21.96■■□□□ 1.11
SPC24-207ENST00000592967 PHKG2P15735 406 aa21.95■■□□□ 1.1
SPC24-207ENST00000592967 AMOTQ4VCS5 1084 aa21.95■■□□□ 1.1
SPC24-207ENST00000592967 IFNL2Q8IZJ0 200 aa21.95■■□□□ 1.1
SPC24-207ENST00000592967 KAT6BQ8WYB5 2073 aa21.94■■□□□ 1.1
SPC24-207ENST00000592967 PROM2Q8N271 834 aa21.93■■□□□ 1.1
SPC24-207ENST00000592967 NUDCQ9Y266 331 aa21.93■■□□□ 1.1
SPC24-207ENST00000592967 PKD1L3Q7Z443 1732 aa21.92■■□□□ 1.1
SPC24-207ENST00000592967 PLEKHG2Q9H7P9 1386 aa21.91■■□□□ 1.1
SPC24-207ENST00000592967 ZNF530Q6P9A1 599 aaPredicted RBP21.91■■□□□ 1.1
SPC24-207ENST00000592967 NHSQ6T4R5 1651 aa21.91■■□□□ 1.1
SPC24-207ENST00000592967 U2AF1L5P0DN76 240 aaPredicted RBP21.89■■□□□ 1.09
SPC24-207ENST00000592967 U2AF1Q01081 240 aaKnown RBP eCLIP21.89■■□□□ 1.097e-7■■□□□ 13.3
SPC24-207ENST00000592967 MPRIPQ6WCQ1 1025 aa21.89■■□□□ 1.09
SPC24-207ENST00000592967 TXNRD1Q16881 649 aa21.88■■□□□ 1.09
SPC24-207ENST00000592967 PRKRIP1Q9H875 184 aaPredicted RBP21.88■■□□□ 1.09
SPC24-207ENST00000592967 MTHFSDQ2M296 383 aaKnown RBP21.87■■□□□ 1.09
SPC24-207ENST00000592967 C1orf141Q5JVX7 400 aa21.87■■□□□ 1.09
SPC24-207ENST00000592967 MYBBP1AQ9BQG0 1328 aaKnown RBP21.86■■□□□ 1.09
SPC24-207ENST00000592967 HSP90AB1P08238 724 aaKnown RBP21.86■■□□□ 1.09
SPC24-207ENST00000592967 DOT1LQ8TEK3 1739 aa21.86■■□□□ 1.09
SPC24-207ENST00000592967 PIGBQ92521 554 aa21.85■■□□□ 1.09
SPC24-207ENST00000592967 DCAF5Q96JK2 942 aa21.85■■□□□ 1.09
SPC24-207ENST00000592967 RSPH6AQ9H0K4 717 aa21.85■■□□□ 1.09
SPC24-207ENST00000592967 BTAF1O14981 1849 aa21.85■■□□□ 1.09
SPC24-207ENST00000592967 PRKAR2BP31323 418 aa21.84■■□□□ 1.09
SPC24-207ENST00000592967 AKAP4Q5JQC9 854 aa21.84■■□□□ 1.09
SPC24-207ENST00000592967 FCHSD2O94868 740 aa21.83■■□□□ 1.09
SPC24-207ENST00000592967 NBPF14Q5TI25 921 aa21.83■■□□□ 1.09
SPC24-207ENST00000592967 PHACTR3Q96KR7 559 aa21.83■■□□□ 1.09
SPC24-207ENST00000592967 PSDA5PKW4 1024 aaPredicted RBP21.82■■□□□ 1.08
SPC24-207ENST00000592967 ERVV-2B6SEH9 535 aa21.82■■□□□ 1.08
SPC24-207ENST00000592967 TMOD3Q9NYL9 352 aa21.82■■□□□ 1.08
SPC24-207ENST00000592967 R3HDM1Q15032 1099 aaKnown RBP21.81■■□□□ 1.08
SPC24-207ENST00000592967 LGR6Q9HBX8 967 aa21.81■■□□□ 1.08
SPC24-207ENST00000592967 LRRC4BQ9NT99 713 aa21.81■■□□□ 1.08
SPC24-207ENST00000592967 KCNQ4P56696 695 aa21.8■■□□□ 1.08
SPC24-207ENST00000592967 TOGARAM1Q9Y4F4 1720 aa21.8■■□□□ 1.08
SPC24-207ENST00000592967 KDM6AO15550 1401 aaPredicted RBP21.8■■□□□ 1.08
SPC24-207ENST00000592967 RREB1Q92766 1687 aa21.79■■□□□ 1.08
SPC24-207ENST00000592967 CABP4P57796 275 aa21.79■■□□□ 1.08
SPC24-207ENST00000592967 RGPD3A6NKT7 1758 aaPredicted RBP21.79■■□□□ 1.08
SPC24-207ENST00000592967 RGPD4Q7Z3J3 1758 aa21.79■■□□□ 1.08
SPC24-207ENST00000592967 SLC27A3Q5K4L6 730 aa21.78■■□□□ 1.08
SPC24-207ENST00000592967 GAS2L2Q8NHY3 880 aa21.78■■□□□ 1.08
SPC24-207ENST00000592967 ASAP1Q9ULH1 1129 aa21.78■■□□□ 1.08
SPC24-207ENST00000592967 ITGB4P16144 1822 aa21.78■■□□□ 1.08
SPC24-207ENST00000592967 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
SPC24-207ENST00000592967 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.08
SPC24-207ENST00000592967 ANO8Q9HCE9 1232 aaPredicted RBP21.77■■□□□ 1.08
SPC24-207ENST00000592967 NUP188Q5SRE5 1749 aa21.77■■□□□ 1.08
SPC24-207ENST00000592967 RNMTO43148 476 aaKnown RBP21.76■■□□□ 1.07
SPC24-207ENST00000592967 ATG3Q9NT62 314 aa21.76■■□□□ 1.07
SPC24-207ENST00000592967 CCNL1Q9UK58 526 aaPredicted RBP21.76■■□□□ 1.07
SPC24-207ENST00000592967 PALLDQ8WX93 1383 aa21.74■■□□□ 1.07
SPC24-207ENST00000592967 GNAT3A8MTJ3 354 aa21.74■■□□□ 1.07
SPC24-207ENST00000592967 PLEKHF1Q96S99 279 aa21.74■■□□□ 1.07
SPC24-207ENST00000592967 STK32BQ9NY57 414 aa21.74■■□□□ 1.07
SPC24-207ENST00000592967 ANP32CO43423 234 aa21.73■■□□□ 1.07
SPC24-207ENST00000592967 SLC15A2Q16348 729 aa21.73■■□□□ 1.07
SPC24-207ENST00000592967 IL17REQ8NFR9 667 aa21.73■■□□□ 1.07
SPC24-207ENST00000592967 PNNQ9H307 717 aaKnown RBP21.72■■□□□ 1.07
SPC24-207ENST00000592967 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
SPC24-207ENST00000592967 MAP3K5Q99683 1374 aa21.71■■□□□ 1.07
SPC24-207ENST00000592967 LOC102724428A0A0B4J2F2 783 aa21.7■■□□□ 1.06
SPC24-207ENST00000592967 NEFMP07197 916 aa21.7■■□□□ 1.06
SPC24-207ENST00000592967 SIK1P57059 783 aa21.7■■□□□ 1.06
SPC24-207ENST00000592967 LY75O60449 1722 aa21.69■■□□□ 1.06
SPC24-207ENST00000592967 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms