RNA–Protein interactions for RNA: ENST00000592928.2

RAD51D-223, Transcript of RAD51 paralog D, human

TSL 1 (best)

Gene RAD51D, Length 207 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51D-223	ENST00000592928	WASHC2A	Q641Q2	1341 aa		13.31	□□□□□ -0.28
RAD51D-223	ENST00000592928	KCNQ2	O43526	872 aa		13.3	□□□□□ -0.28
RAD51D-223	ENST00000592928	PANK3	Q9H999	370 aa		13.3	□□□□□ -0.28
RAD51D-223	ENST00000592928	PLEKHG2	Q9H7P9	1386 aa		13.3	□□□□□ -0.28
RAD51D-223	ENST00000592928	TXNRD1	Q16881	649 aa		13.29	□□□□□ -0.28
RAD51D-223	ENST00000592928	PROM2	Q8N271	834 aa		13.29	□□□□□ -0.28
RAD51D-223	ENST00000592928	ZCRB1	Q8TBF4	217 aa	Known RBP	13.29	□□□□□ -0.28
RAD51D-223	ENST00000592928	RAPGEF4	Q8WZA2	1011 aa		13.29	□□□□□ -0.28
RAD51D-223	ENST00000592928	ACSBG1	Q96GR2	724 aa		13.29	□□□□□ -0.28
RAD51D-223	ENST00000592928	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.29	□□□□□ -0.28
RAD51D-223	ENST00000592928	USHBP1	Q8N6Y0	703 aa		13.28	□□□□□ -0.28
RAD51D-223	ENST00000592928	DDX54	Q8TDD1	881 aa	Known RBP	13.28	□□□□□ -0.28
RAD51D-223	ENST00000592928	POLK	Q9UBT6	870 aa		13.28	□□□□□ -0.28
RAD51D-223	ENST00000592928	KIF7	Q2M1P5	1343 aa		13.28	□□□□□ -0.28
RAD51D-223	ENST00000592928	TAT	P17735	454 aa	Predicted RBP	13.27	□□□□□ -0.29
RAD51D-223	ENST00000592928	PCDH11X	Q9BZA7	1347 aa		13.27	□□□□□ -0.29
RAD51D-223	ENST00000592928	PCDH11Y	Q9BZA8	1340 aa		13.27	□□□□□ -0.29
RAD51D-223	ENST00000592928	LY75	O60449	1722 aa		13.27	□□□□□ -0.29
RAD51D-223	ENST00000592928	TOGARAM1	Q9Y4F4	1720 aa		13.25	□□□□□ -0.29
RAD51D-223	ENST00000592928	PPM1G	O15355	546 aa	Predicted RBP	13.25	□□□□□ -0.29
RAD51D-223	ENST00000592928	QSER1	Q2KHR3	1735 aa		13.25	□□□□□ -0.29
RAD51D-223	ENST00000592928	STK32B	Q9NY57	414 aa		13.24	□□□□□ -0.29
RAD51D-223	ENST00000592928	EIF4A2	Q14240	407 aa	Known RBP	13.23	□□□□□ -0.29
RAD51D-223	ENST00000592928	SLC15A2	Q16348	729 aa		13.23	□□□□□ -0.29
RAD51D-223	ENST00000592928	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.23	□□□□□ -0.29
RAD51D-223	ENST00000592928	SLC27A3	Q5K4L6	730 aa		13.23	□□□□□ -0.29
RAD51D-223	ENST00000592928	EYA1	Q99502	592 aa		13.23	□□□□□ -0.29
RAD51D-223	ENST00000592928	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
RAD51D-223	ENST00000592928	KNSTRN	Q9Y448	316 aa		13.23	□□□□□ -0.29
RAD51D-223	ENST00000592928	KAT6B	Q8WYB5	2073 aa		13.23	□□□□□ -0.29
RAD51D-223	ENST00000592928	IGSF1	Q8N6C5	1336 aa		13.22	□□□□□ -0.29
RAD51D-223	ENST00000592928	ZEB1	P37275	1124 aa	Predicted RBP	13.22	□□□□□ -0.29
RAD51D-223	ENST00000592928	TNNT2	P45379	298 aa	Predicted RBP	13.22	□□□□□ -0.29
RAD51D-223	ENST00000592928	PRIM1	P49642	420 aa	Known RBP	13.22	□□□□□ -0.29
RAD51D-223	ENST00000592928	SPON1	Q9HCB6	807 aa		13.22	□□□□□ -0.29
RAD51D-223	ENST00000592928	CYP27B1	O15528	508 aa		13.21	□□□□□ -0.29
RAD51D-223	ENST00000592928	MORC1	Q86VD1	984 aa		13.21	□□□□□ -0.29
RAD51D-223	ENST00000592928	SYTL4	Q96C24	671 aa	Predicted RBP	13.21	□□□□□ -0.29
RAD51D-223	ENST00000592928	NPC1L1	Q9UHC9	1359 aa		13.2	□□□□□ -0.3
RAD51D-223	ENST00000592928	LRRC4B	Q9NT99	713 aa		13.2	□□□□□ -0.3
RAD51D-223	ENST00000592928	SPG7	Q9UQ90	795 aa		13.2	□□□□□ -0.3
RAD51D-223	ENST00000592928	ITGB4	P16144	1822 aa		13.2	□□□□□ -0.3
RAD51D-223	ENST00000592928	TUBGCP6	Q96RT7	1819 aa		13.19	□□□□□ -0.3
RAD51D-223	ENST00000592928	PER1	O15534	1290 aa	Predicted RBP	13.19	□□□□□ -0.3
RAD51D-223	ENST00000592928	NKX1-1	Q15270	411 aa	Predicted RBP	13.19	□□□□□ -0.3
RAD51D-223	ENST00000592928	C5	P01031	1676 aa		13.18	□□□□□ -0.3
RAD51D-223	ENST00000592928	ZNF827	Q17R98	1081 aa		13.18	□□□□□ -0.3
RAD51D-223	ENST00000592928	AKT1S1	Q96B36	256 aa		13.18	□□□□□ -0.3
RAD51D-223	ENST00000592928	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.18	□□□□□ -0.3
RAD51D-223	ENST00000592928	KDR	P35968	1356 aa		13.18	□□□□□ -0.3
RAD51D-223	ENST00000592928	COL24A1	Q17RW2	1714 aa		13.17	□□□□□ -0.3
RAD51D-223	ENST00000592928	PALLD	Q8WX93	1383 aa		13.17	□□□□□ -0.3
RAD51D-223	ENST00000592928	PHKG2	P15735	406 aa		13.16	□□□□□ -0.3
RAD51D-223	ENST00000592928	MTFR1L	Q9H019	292 aa		13.16	□□□□□ -0.3
RAD51D-223	ENST00000592928	TAF1L	Q8IZX4	1826 aa		13.16	□□□□□ -0.3
RAD51D-223	ENST00000592928	ZBTB7A	O95365	584 aa		13.15	□□□□□ -0.3
RAD51D-223	ENST00000592928	PTGER2	P43116	358 aa		13.15	□□□□□ -0.3
RAD51D-223	ENST00000592928	IFNL2	Q8IZJ0	200 aa		13.15	□□□□□ -0.3
RAD51D-223	ENST00000592928	CCNL1	Q9UK58	526 aa	Predicted RBP	13.15	□□□□□ -0.3
RAD51D-223	ENST00000592928	HMGB2	P26583	209 aa	Known RBP	13.14	□□□□□ -0.31
RAD51D-223	ENST00000592928	SMARCC1	Q92922	1105 aa	Predicted RBP	13.14	□□□□□ -0.31
RAD51D-223	ENST00000592928	SGIP1	Q9BQI5	828 aa		13.14	□□□□□ -0.31
RAD51D-223	ENST00000592928	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.14	□□□□□ -0.31
RAD51D-223	ENST00000592928	PNPLA7	Q6ZV29	1317 aa		13.13	□□□□□ -0.31
RAD51D-223	ENST00000592928	COL3A1	P02461	1466 aa	Predicted RBP	13.13	□□□□□ -0.31
RAD51D-223	ENST00000592928	IL13	P35225	146 aa		13.13	□□□□□ -0.31
RAD51D-223	ENST00000592928	MPRIP	Q6WCQ1	1025 aa		13.13	□□□□□ -0.31
RAD51D-223	ENST00000592928	ZNF831	Q5JPB2	1677 aa		13.12	□□□□□ -0.31
RAD51D-223	ENST00000592928	HSP90AB1	P08238	724 aa	Known RBP	13.12	□□□□□ -0.31
RAD51D-223	ENST00000592928	AMOT	Q4VCS5	1084 aa		13.12	□□□□□ -0.31
RAD51D-223	ENST00000592928	SLC16A10	Q8TF71	515 aa		13.12	□□□□□ -0.31
RAD51D-223	ENST00000592928	PIGB	Q92521	554 aa		13.12	□□□□□ -0.31
RAD51D-223	ENST00000592928	C4B	P0C0L5	1744 aa		13.12	□□□□□ -0.31
RAD51D-223	ENST00000592928	KDM6A	O15550	1401 aa	Predicted RBP	13.12	□□□□□ -0.31
RAD51D-223	ENST00000592928	MAP3K5	Q99683	1374 aa		13.11	□□□□□ -0.31
RAD51D-223	ENST00000592928	MTHFS	P49914	203 aa		13.11	□□□□□ -0.31
RAD51D-223	ENST00000592928	KCNQ4	P56696	695 aa		13.11	□□□□□ -0.31
RAD51D-223	ENST00000592928	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.11	□□□□□ -0.31
RAD51D-223	ENST00000592928	CC2D1B	Q5T0F9	858 aa	Known RBP	13.11	□□□□□ -0.31
RAD51D-223	ENST00000592928	AEBP1	Q8IUX7	1158 aa		13.11	□□□□□ -0.31
RAD51D-223	ENST00000592928	TMOD3	Q9NYL9	352 aa		13.11	□□□□□ -0.31
RAD51D-223	ENST00000592928	SULT6B1	Q6IMI4	303 aa		13.1	□□□□□ -0.31
RAD51D-223	ENST00000592928	DCAF5	Q96JK2	942 aa		13.1	□□□□□ -0.31
RAD51D-223	ENST00000592928	TFCP2L1	Q9NZI6	479 aa		13.1	□□□□□ -0.31
RAD51D-223	ENST00000592928	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.1	□□□□□ -0.31
RAD51D-223	ENST00000592928	ERVV-2	B6SEH9	535 aa		13.09	□□□□□ -0.31
RAD51D-223	ENST00000592928	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.09	□□□□□ -0.31
RAD51D-223	ENST00000592928	UBR3	Q6ZT12	1888 aa		13.09	□□□□□ -0.31
RAD51D-223	ENST00000592928	CIC	Q96RK0	1608 aa	Predicted RBP	13.09	□□□□□ -0.31
RAD51D-223	ENST00000592928	ADAMTS7	Q9UKP4	1686 aa		13.08	□□□□□ -0.31
RAD51D-223	ENST00000592928	SCN11A	Q9UI33	1791 aa		13.08	□□□□□ -0.32
RAD51D-223	ENST00000592928	MRC1	P22897	1456 aa		13.08	□□□□□ -0.32
RAD51D-223	ENST00000592928	LOC102724428	A0A0B4J2F2	783 aa		13.07	□□□□□ -0.32
RAD51D-223	ENST00000592928	SIK1	P57059	783 aa		13.07	□□□□□ -0.32
RAD51D-223	ENST00000592928	C1orf141	Q5JVX7	400 aa		13.07	□□□□□ -0.32
RAD51D-223	ENST00000592928	COL5A3	P25940	1745 aa	Predicted RBP	13.07	□□□□□ -0.32
RAD51D-223	ENST00000592928	DIAPH1	O60610	1272 aa	Known RBP	13.06	□□□□□ -0.32
RAD51D-223	ENST00000592928	FLAD1	Q8NFF5	587 aa		13.06	□□□□□ -0.32
RAD51D-223	ENST00000592928	ARX	Q96QS3	562 aa		13.06	□□□□□ -0.32
RAD51D-223	ENST00000592928	ATG3	Q9NT62	314 aa		13.06	□□□□□ -0.32

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