RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 EMILIN1Q9Y6C2 1016 aa20.52■□□□□ 0.88
SF3A2-207ENST00000592839 LY75O60449 1722 aa20.52■□□□□ 0.88
SF3A2-207ENST00000592839 LTV1Q96GA3 475 aaPredicted RBP20.51■□□□□ 0.87
SF3A2-207ENST00000592839 POLKQ9UBT6 870 aa20.51■□□□□ 0.87
SF3A2-207ENST00000592839 KCNQ2O43526 872 aa20.5■□□□□ 0.87
SF3A2-207ENST00000592839 PANK3Q9H999 370 aa20.5■□□□□ 0.87
SF3A2-207ENST00000592839 QSER1Q2KHR3 1735 aa20.5■□□□□ 0.87
SF3A2-207ENST00000592839 ZCRB1Q8TBF4 217 aaKnown RBP20.49■□□□□ 0.87
SF3A2-207ENST00000592839 KIF7Q2M1P5 1343 aa20.49■□□□□ 0.87
SF3A2-207ENST00000592839 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
SF3A2-207ENST00000592839 ANO8Q9HCE9 1232 aaPredicted RBP20.48■□□□□ 0.87
SF3A2-207ENST00000592839 RAPGEF4Q8WZA2 1011 aa20.46■□□□□ 0.87
SF3A2-207ENST00000592839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.46■□□□□ 0.87
SF3A2-207ENST00000592839 PCDH11XQ9BZA7 1347 aa20.46■□□□□ 0.87
SF3A2-207ENST00000592839 PCDH11YQ9BZA8 1340 aa20.46■□□□□ 0.87
SF3A2-207ENST00000592839 TOGARAM1Q9Y4F4 1720 aa20.44■□□□□ 0.86
SF3A2-207ENST00000592839 KAT6BQ8WYB5 2073 aa20.44■□□□□ 0.86
SF3A2-207ENST00000592839 AMER1Q5JTC6 1135 aaPredicted RBP20.44■□□□□ 0.86
SF3A2-207ENST00000592839 NPC1L1Q9UHC9 1359 aa20.44■□□□□ 0.86
SF3A2-207ENST00000592839 PER1O15534 1290 aaPredicted RBP20.43■□□□□ 0.86
SF3A2-207ENST00000592839 TATP17735 454 aaPredicted RBP20.43■□□□□ 0.86
SF3A2-207ENST00000592839 COL24A1Q17RW2 1714 aa20.43■□□□□ 0.86
SF3A2-207ENST00000592839 SLC27A3Q5K4L6 730 aa20.42■□□□□ 0.86
SF3A2-207ENST00000592839 ACSBG1Q96GR2 724 aa20.42■□□□□ 0.86
SF3A2-207ENST00000592839 IGSF1Q8N6C5 1336 aa20.42■□□□□ 0.86
SF3A2-207ENST00000592839 NKX1-1Q15270 411 aaPredicted RBP20.41■□□□□ 0.86
SF3A2-207ENST00000592839 SLC15A2Q16348 729 aa20.41■□□□□ 0.86
SF3A2-207ENST00000592839 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
SF3A2-207ENST00000592839 DDX54Q8TDD1 881 aaKnown RBP20.41■□□□□ 0.86
SF3A2-207ENST00000592839 EYA1Q99502 592 aa20.41■□□□□ 0.86
SF3A2-207ENST00000592839 ITGB4P16144 1822 aa20.41■□□□□ 0.86
SF3A2-207ENST00000592839 SPON1Q9HCB6 807 aa20.4■□□□□ 0.86
SF3A2-207ENST00000592839 CYP27B1O15528 508 aa20.39■□□□□ 0.85
SF3A2-207ENST00000592839 EIF4A2Q14240 407 aaKnown RBP20.39■□□□□ 0.85
SF3A2-207ENST00000592839 KDRP35968 1356 aa20.38■□□□□ 0.85
SF3A2-207ENST00000592839 POLR3GLQ9BT43 218 aa20.38■□□□□ 0.85
SF3A2-207ENST00000592839 LRRC4BQ9NT99 713 aa20.38■□□□□ 0.85
SF3A2-207ENST00000592839 PPP1R1BQ9UD71 204 aaPredicted RBP20.38■□□□□ 0.85
SF3A2-207ENST00000592839 KNSTRNQ9Y448 316 aa20.38■□□□□ 0.85
SF3A2-207ENST00000592839 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
SF3A2-207ENST00000592839 STK32BQ9NY57 414 aa20.37■□□□□ 0.85
SF3A2-207ENST00000592839 TUBGCP6Q96RT7 1819 aa20.36■□□□□ 0.85
SF3A2-207ENST00000592839 TAF1LQ8IZX4 1826 aa20.35■□□□□ 0.85
SF3A2-207ENST00000592839 AKT1S1Q96B36 256 aa20.35■□□□□ 0.85
SF3A2-207ENST00000592839 DCAF8L1A6NGE4 600 aa20.34■□□□□ 0.85
SF3A2-207ENST00000592839 MORC1Q86VD1 984 aa20.34■□□□□ 0.85
SF3A2-207ENST00000592839 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
SF3A2-207ENST00000592839 ZNF831Q5JPB2 1677 aa20.33■□□□□ 0.85
SF3A2-207ENST00000592839 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.85
SF3A2-207ENST00000592839 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.85
SF3A2-207ENST00000592839 C5P01031 1676 aa20.32■□□□□ 0.84
SF3A2-207ENST00000592839 SGIP1Q9BQI5 828 aa20.32■□□□□ 0.84
SF3A2-207ENST00000592839 PTGER2P43116 358 aa20.31■□□□□ 0.84
SF3A2-207ENST00000592839 ZNF827Q17R98 1081 aa20.3■□□□□ 0.84
SF3A2-207ENST00000592839 PDGFDQ9GZP0 370 aaPredicted RBP20.3■□□□□ 0.84
SF3A2-207ENST00000592839 PHKG2P15735 406 aa20.29■□□□□ 0.84
SF3A2-207ENST00000592839 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
SF3A2-207ENST00000592839 IFNL2Q8IZJ0 200 aa20.29■□□□□ 0.84
SF3A2-207ENST00000592839 MTFR1LQ9H019 292 aa20.29■□□□□ 0.84
SF3A2-207ENST00000592839 IL13P35225 146 aa20.28■□□□□ 0.84
SF3A2-207ENST00000592839 SLC16A10Q8TF71 515 aa20.28■□□□□ 0.84
SF3A2-207ENST00000592839 SYTL4Q96C24 671 aaPredicted RBP20.28■□□□□ 0.84
SF3A2-207ENST00000592839 MAP3K5Q99683 1374 aa20.28■□□□□ 0.84
SF3A2-207ENST00000592839 COL3A1P02461 1466 aaPredicted RBP20.28■□□□□ 0.84
SF3A2-207ENST00000592839 PALLDQ8WX93 1383 aa20.27■□□□□ 0.84
SF3A2-207ENST00000592839 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.83
SF3A2-207ENST00000592839 YY1P25490 414 aa20.26■□□□□ 0.83
SF3A2-207ENST00000592839 AMOTQ4VCS5 1084 aa20.26■□□□□ 0.83
SF3A2-207ENST00000592839 SMARCC1Q92922 1105 aaPredicted RBP20.26■□□□□ 0.83
SF3A2-207ENST00000592839 PNPLA7Q6ZV29 1317 aa20.26■□□□□ 0.83
SF3A2-207ENST00000592839 ADAMTS7Q9UKP4 1686 aa20.26■□□□□ 0.83
SF3A2-207ENST00000592839 C4BP0C0L5 1744 aa20.24■□□□□ 0.83
SF3A2-207ENST00000592839 PIGBQ92521 554 aa20.24■□□□□ 0.83
SF3A2-207ENST00000592839 CCNL1Q9UK58 526 aaPredicted RBP20.24■□□□□ 0.83
SF3A2-207ENST00000592839 KDM6AO15550 1401 aaPredicted RBP20.23■□□□□ 0.83
SF3A2-207ENST00000592839 ZBTB7AO95365 584 aa20.23■□□□□ 0.83
SF3A2-207ENST00000592839 HSP90AB1P08238 724 aaKnown RBP20.23■□□□□ 0.83
SF3A2-207ENST00000592839 UBR3Q6ZT12 1888 aa20.23■□□□□ 0.83
SF3A2-207ENST00000592839 SCN11AQ9UI33 1791 aa20.22■□□□□ 0.83
SF3A2-207ENST00000592839 ERVV-2B6SEH9 535 aa20.22■□□□□ 0.83
SF3A2-207ENST00000592839 DCAF5Q96JK2 942 aa20.22■□□□□ 0.83
SF3A2-207ENST00000592839 MTHFSP49914 203 aa20.21■□□□□ 0.83
SF3A2-207ENST00000592839 PLEKHO1Q53GL0 409 aaPredicted RBP20.21■□□□□ 0.83
SF3A2-207ENST00000592839 MPRIPQ6WCQ1 1025 aa20.21■□□□□ 0.83
SF3A2-207ENST00000592839 ATF5Q9Y2D1 282 aaPredicted RBP20.21■□□□□ 0.83
SF3A2-207ENST00000592839 MRC1P22897 1456 aa20.21■□□□□ 0.83
SF3A2-207ENST00000592839 AEBP1Q8IUX7 1158 aa20.2■□□□□ 0.82
SF3A2-207ENST00000592839 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
SF3A2-207ENST00000592839 SULT6B1Q6IMI4 303 aa20.18■□□□□ 0.82
SF3A2-207ENST00000592839 TMOD3Q9NYL9 352 aa20.18■□□□□ 0.82
SF3A2-207ENST00000592839 VIRMAQ69YN4 1812 aaKnown RBP20.16■□□□□ 0.82
SF3A2-207ENST00000592839 KCNQ4P56696 695 aa20.16■□□□□ 0.82
SF3A2-207ENST00000592839 FLAD1Q8NFF5 587 aa20.16■□□□□ 0.82
SF3A2-207ENST00000592839 TFCP2L1Q9NZI6 479 aa20.16■□□□□ 0.82
SF3A2-207ENST00000592839 UTRNP46939 3433 aa20.15■□□□□ 0.82
SF3A2-207ENST00000592839 LOC102724428A0A0B4J2F2 783 aa20.15■□□□□ 0.82
SF3A2-207ENST00000592839 SIK1P57059 783 aa20.15■□□□□ 0.82
SF3A2-207ENST00000592839 CC2D1BQ5T0F9 858 aaKnown RBP20.15■□□□□ 0.82
SF3A2-207ENST00000592839 ZNF530Q6P9A1 599 aaPredicted RBP20.14■□□□□ 0.81
SF3A2-207ENST00000592839 ATG3Q9NT62 314 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms