RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 MTHFSDQ2M296 383 aaKnown RBP20.78■□□□□ 0.92
PRKCSH-217ENST00000592741 KRT24Q2M2I5 525 aa20.78■□□□□ 0.92
PRKCSH-217ENST00000592741 INTS3Q68E01 1043 aaKnown RBP20.78■□□□□ 0.92
PRKCSH-217ENST00000592741 GAS2L2Q8NHY3 880 aa20.78■□□□□ 0.92
PRKCSH-217ENST00000592741 SIRT2Q8IXJ6 389 aa20.78■□□□□ 0.92
PRKCSH-217ENST00000592741 PTPRCP08575 1304 aa20.77■□□□□ 0.92
PRKCSH-217ENST00000592741 EYA1Q99502 592 aa20.77■□□□□ 0.92
PRKCSH-217ENST00000592741 MARF1Q9Y4F3 1742 aaKnown RBP20.77■□□□□ 0.92
PRKCSH-217ENST00000592741 BMP2KLQ5H9B9 411 aa20.77■□□□□ 0.91
PRKCSH-217ENST00000592741 RGS12O14924 1447 aa20.77■□□□□ 0.91
PRKCSH-217ENST00000592741 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
PRKCSH-217ENST00000592741 TBC1D2Q9BYX2 928 aa20.75■□□□□ 0.91
PRKCSH-217ENST00000592741 FOXO3O43524 673 aa20.75■□□□□ 0.91
PRKCSH-217ENST00000592741 TSPYL4Q9UJ04 414 aa20.74■□□□□ 0.91
PRKCSH-217ENST00000592741 HOXC9P31274 260 aa20.74■□□□□ 0.91
PRKCSH-217ENST00000592741 HTATSF1O43719 755 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-217ENST00000592741 CHD2O14647 1828 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-217ENST00000592741 ABTB2Q8N961 1025 aa20.72■□□□□ 0.91
PRKCSH-217ENST00000592741 BCL11AQ9H165 835 aa20.72■□□□□ 0.91
PRKCSH-217ENST00000592741 ZNF142P52746 1687 aaPredicted RBP20.72■□□□□ 0.91
PRKCSH-217ENST00000592741 FRAT2O75474 233 aaPredicted RBP20.72■□□□□ 0.91
PRKCSH-217ENST00000592741 NUTM2GQ5VZR2 741 aa20.72■□□□□ 0.91
PRKCSH-217ENST00000592741 ANKLE2Q86XL3 938 aa20.72■□□□□ 0.91
PRKCSH-217ENST00000592741 LRRC37A3O60309 1634 aa20.71■□□□□ 0.91
PRKCSH-217ENST00000592741 SLKQ9H2G2 1235 aaPredicted RBP20.71■□□□□ 0.91
PRKCSH-217ENST00000592741 MIS18AQ9NYP9 233 aa20.71■□□□□ 0.91
PRKCSH-217ENST00000592741 MSH6P52701 1360 aa20.7■□□□□ 0.9
PRKCSH-217ENST00000592741 ANKRD44Q8N8A2 993 aa20.7■□□□□ 0.9
PRKCSH-217ENST00000592741 DCTPP1Q9H773 170 aa20.7■□□□□ 0.9
PRKCSH-217ENST00000592741 RTL1A6NKG5 1358 aa20.7■□□□□ 0.9
PRKCSH-217ENST00000592741 NWD1Q149M9 1564 aa20.7■□□□□ 0.9
PRKCSH-217ENST00000592741 SLC4A2P04920 1241 aa20.69■□□□□ 0.9
PRKCSH-217ENST00000592741 RPAP2Q8IXW5 612 aaPredicted RBP20.69■□□□□ 0.9
PRKCSH-217ENST00000592741 PHF8Q9UPP1 1060 aa20.69■□□□□ 0.9
PRKCSH-217ENST00000592741 ATP10DQ9P241 1426 aa20.69■□□□□ 0.9
PRKCSH-217ENST00000592741 ANTXR1Q9H6X2 564 aa20.69■□□□□ 0.9
PRKCSH-217ENST00000592741 GNAT3A8MTJ3 354 aa20.68■□□□□ 0.9
PRKCSH-217ENST00000592741 RBM25P49756 843 aaKnown RBP20.68■□□□□ 0.9
PRKCSH-217ENST00000592741 GSE1Q14687 1217 aa20.68■□□□□ 0.9
PRKCSH-217ENST00000592741 C14orf37Q86TY3 774 aa20.67■□□□□ 0.9
PRKCSH-217ENST00000592741 CEP85Q6P2H3 762 aa20.66■□□□□ 0.9
PRKCSH-217ENST00000592741 MAP3K5Q99683 1374 aa20.66■□□□□ 0.9
PRKCSH-217ENST00000592741 LTN1O94822 1766 aa20.65■□□□□ 0.9
PRKCSH-217ENST00000592741 HSCBQ8IWL3 235 aa20.65■□□□□ 0.9
PRKCSH-217ENST00000592741 STK31Q9BXU1 1019 aa20.65■□□□□ 0.9
PRKCSH-217ENST00000592741 CCT4P50991 539 aaKnown RBP20.64■□□□□ 0.89
PRKCSH-217ENST00000592741 LTV1Q96GA3 475 aaPredicted RBP20.64■□□□□ 0.89
PRKCSH-217ENST00000592741 MEIS3Q99687 375 aa20.64■□□□□ 0.89
PRKCSH-217ENST00000592741 ADGRL3Q9HAR2 1447 aa20.64■□□□□ 0.89
PRKCSH-217ENST00000592741 TBC1D9Q6ZT07 1266 aa20.63■□□□□ 0.89
PRKCSH-217ENST00000592741 FAM208AQ9UK61 1670 aaKnown RBP20.63■□□□□ 0.89
PRKCSH-217ENST00000592741 SOS1Q07889 1333 aaPredicted RBP20.62■□□□□ 0.89
PRKCSH-217ENST00000592741 EIF5BO60841 1220 aaKnown RBP20.62■□□□□ 0.89
PRKCSH-217ENST00000592741 CDC45O75419 566 aa20.62■□□□□ 0.89
PRKCSH-217ENST00000592741 G2E3Q7L622 706 aa20.62■□□□□ 0.89
PRKCSH-217ENST00000592741 PLEKHM2Q8IWE5 1019 aa20.62■□□□□ 0.89
PRKCSH-217ENST00000592741 BABAM1Q9NWV8 329 aa20.62■□□□□ 0.89
PRKCSH-217ENST00000592741 CCDC30Q5VVM6 783 aa20.62■□□□□ 0.89
PRKCSH-217ENST00000592741 NFAT5O94916 1531 aa20.61■□□□□ 0.89
PRKCSH-217ENST00000592741 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
PRKCSH-217ENST00000592741 IP6K1Q92551 441 aa20.6■□□□□ 0.89
PRKCSH-217ENST00000592741 HMMRO75330 724 aa20.6■□□□□ 0.89
PRKCSH-217ENST00000592741 SNX21Q969T3 373 aa20.6■□□□□ 0.89
PRKCSH-217ENST00000592741 ADAMTSL3P82987 1691 aa20.6■□□□□ 0.89
PRKCSH-217ENST00000592741 TTC22Q5TAA0 569 aa20.59■□□□□ 0.89
PRKCSH-217ENST00000592741 F6X3S4 739 aa20.59■□□□□ 0.89
PRKCSH-217ENST00000592741 GSPT1P15170 499 aaKnown RBP20.59■□□□□ 0.89
PRKCSH-217ENST00000592741 PSME1Q06323 249 aa20.59■□□□□ 0.89
PRKCSH-217ENST00000592741 TAF7Q15545 349 aaPredicted RBP20.59■□□□□ 0.89
PRKCSH-217ENST00000592741 ESCO1Q5FWF5 840 aa20.59■□□□□ 0.89
PRKCSH-217ENST00000592741 SPRYD3Q8NCJ5 442 aa20.59■□□□□ 0.89
PRKCSH-217ENST00000592741 IL17REQ8NFR9 667 aa20.59■□□□□ 0.89
PRKCSH-217ENST00000592741 RBM33Q96EV2 1170 aaKnown RBP20.58■□□□□ 0.89
PRKCSH-217ENST00000592741 KCNH5Q8NCM2 988 aa20.57■□□□□ 0.88
PRKCSH-217ENST00000592741 CHMP5Q9NZZ3 219 aa20.57■□□□□ 0.88
PRKCSH-217ENST00000592741 FLIIQ13045 1269 aa20.57■□□□□ 0.88
PRKCSH-217ENST00000592741 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
PRKCSH-217ENST00000592741 NPHP4O75161 1426 aaPredicted RBP20.57■□□□□ 0.88
PRKCSH-217ENST00000592741 CACNA1FO60840 1977 aa20.56■□□□□ 0.88
PRKCSH-217ENST00000592741 PHRF1Q9P1Y6 1649 aaKnown RBP20.55■□□□□ 0.88
PRKCSH-217ENST00000592741 GNAI2P04899 355 aa20.55■□□□□ 0.88
PRKCSH-217ENST00000592741 FKBP5Q13451 457 aaPredicted RBP20.55■□□□□ 0.88
PRKCSH-217ENST00000592741 C16orf71Q8IYS4 520 aaPredicted RBP20.55■□□□□ 0.88
PRKCSH-217ENST00000592741 SETD1BQ9UPS6 1966 aaKnown RBP20.55■□□□□ 0.88
PRKCSH-217ENST00000592741 NCOA3Q9Y6Q9 1424 aa20.54■□□□□ 0.88
PRKCSH-217ENST00000592741 N4BP2Q86UW6 1770 aaPredicted RBP20.53■□□□□ 0.88
PRKCSH-217ENST00000592741 PXDNLA1KZ92 1463 aa20.53■□□□□ 0.88
PRKCSH-217ENST00000592741 SMARCA5O60264 1052 aaPredicted RBP20.53■□□□□ 0.88
PRKCSH-217ENST00000592741 GNAI3P08754 354 aa20.53■□□□□ 0.88
PRKCSH-217ENST00000592741 NECTIN2Q92692 538 aa20.53■□□□□ 0.88
PRKCSH-217ENST00000592741 KIF2CQ99661 725 aa20.53■□□□□ 0.88
PRKCSH-217ENST00000592741 APBB1O00213 710 aa20.52■□□□□ 0.88
PRKCSH-217ENST00000592741 NBPF6Q5VWK0 638 aa20.52■□□□□ 0.88
PRKCSH-217ENST00000592741 NBPF4Q96M43 638 aa20.52■□□□□ 0.88
PRKCSH-217ENST00000592741 CEMIPQ8WUJ3 1361 aa20.52■□□□□ 0.88
PRKCSH-217ENST00000592741 ZBTB7CA1YPR0 619 aa20.51■□□□□ 0.87
PRKCSH-217ENST00000592741 OTUD7AQ8TE49 926 aaPredicted RBP20.51■□□□□ 0.87
PRKCSH-217ENST00000592741 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
PRKCSH-217ENST00000592741 HSP90AB1P08238 724 aaKnown RBP20.51■□□□□ 0.87
PRKCSH-217ENST00000592741 CASC1Q6TDU7 716 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms