RNA–Protein interactions for RNA: ENST00000592706.5

GFAP-223, Transcript of glial fibrillary acidic protein, humanhuman

TSL 4

Gene GFAP, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-223ENST00000592706 PLSCR1O15162 318 aa14.17□□□□□ -0.14
GFAP-223ENST00000592706 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
GFAP-223ENST00000592706 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
GFAP-223ENST00000592706 KNSTRNQ9Y448 316 aa14.17□□□□□ -0.14
GFAP-223ENST00000592706 CASZ1Q86V15 1759 aa14.17□□□□□ -0.14
GFAP-223ENST00000592706 PSDA5PKW4 1024 aaPredicted RBP14.16□□□□□ -0.14
GFAP-223ENST00000592706 USHBP1Q8N6Y0 703 aa14.16□□□□□ -0.14
GFAP-223ENST00000592706 POLKQ9UBT6 870 aa14.16□□□□□ -0.14
GFAP-223ENST00000592706 QSER1Q2KHR3 1735 aa14.15□□□□□ -0.14
GFAP-223ENST00000592706 TATP17735 454 aaPredicted RBP14.15□□□□□ -0.14
GFAP-223ENST00000592706 PTF1AQ7RTS3 328 aa14.15□□□□□ -0.14
GFAP-223ENST00000592706 ZCRB1Q8TBF4 217 aaKnown RBP14.15□□□□□ -0.14
GFAP-223ENST00000592706 PLEKHG2Q9H7P9 1386 aa14.14□□□□□ -0.15
GFAP-223ENST00000592706 TNNT2P45379 298 aaPredicted RBP14.14□□□□□ -0.15
GFAP-223ENST00000592706 R3HDM1Q15032 1099 aaKnown RBP14.14□□□□□ -0.15
GFAP-223ENST00000592706 NBPF14Q5TI25 921 aa14.14□□□□□ -0.15
GFAP-223ENST00000592706 DDX54Q8TDD1 881 aaKnown RBP14.14□□□□□ -0.15
GFAP-223ENST00000592706 ACSBG1Q96GR2 724 aa14.14□□□□□ -0.15
GFAP-223ENST00000592706 PCDH11XQ9BZA7 1347 aa14.14□□□□□ -0.15
GFAP-223ENST00000592706 PCDH11YQ9BZA8 1340 aa14.14□□□□□ -0.15
GFAP-223ENST00000592706 KCNQ2O43526 872 aa14.13□□□□□ -0.15
GFAP-223ENST00000592706 MORC1Q86VD1 984 aa14.13□□□□□ -0.15
GFAP-223ENST00000592706 TUBGCP6Q96RT7 1819 aa14.13□□□□□ -0.15
GFAP-223ENST00000592706 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
GFAP-223ENST00000592706 VIRMAQ69YN4 1812 aaKnown RBP14.11□□□□□ -0.15
GFAP-223ENST00000592706 TAF1LQ8IZX4 1826 aa14.11□□□□□ -0.15
GFAP-223ENST00000592706 NPC1L1Q9UHC9 1359 aa14.1□□□□□ -0.15
GFAP-223ENST00000592706 EIF4A2Q14240 407 aaKnown RBP14.1□□□□□ -0.15
GFAP-223ENST00000592706 EYA1Q99502 592 aa14.1□□□□□ -0.15
GFAP-223ENST00000592706 C5P01031 1676 aa14.1□□□□□ -0.15
GFAP-223ENST00000592706 IGSF1Q8N6C5 1336 aa14.1□□□□□ -0.15
GFAP-223ENST00000592706 TXNRD1Q16881 649 aa14.09□□□□□ -0.15
GFAP-223ENST00000592706 ANO8Q9HCE9 1232 aaPredicted RBP14.09□□□□□ -0.15
GFAP-223ENST00000592706 PROM2Q8N271 834 aa14.08□□□□□ -0.16
GFAP-223ENST00000592706 PER1O15534 1290 aaPredicted RBP14.07□□□□□ -0.16
GFAP-223ENST00000592706 SYTL4Q96C24 671 aaPredicted RBP14.07□□□□□ -0.16
GFAP-223ENST00000592706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.07□□□□□ -0.16
GFAP-223ENST00000592706 SPG7Q9UQ90 795 aa14.07□□□□□ -0.16
GFAP-223ENST00000592706 SRCAPQ6ZRS2 3230 aa14.06□□□□□ -0.16
GFAP-223ENST00000592706 PRIM1P49642 420 aaKnown RBP14.06□□□□□ -0.16
GFAP-223ENST00000592706 SCN11AQ9UI33 1791 aa14.05□□□□□ -0.16
GFAP-223ENST00000592706 CYP27B1O15528 508 aa14.05□□□□□ -0.16
GFAP-223ENST00000592706 SLC27A3Q5K4L6 730 aa14.05□□□□□ -0.16
GFAP-223ENST00000592706 STK32BQ9NY57 414 aa14.05□□□□□ -0.16
GFAP-223ENST00000592706 COL24A1Q17RW2 1714 aa14.04□□□□□ -0.16
GFAP-223ENST00000592706 CC2D1BQ5T0F9 858 aaKnown RBP14.03□□□□□ -0.16
GFAP-223ENST00000592706 KDRP35968 1356 aa14.03□□□□□ -0.16
GFAP-223ENST00000592706 COL3A1P02461 1466 aaPredicted RBP14.03□□□□□ -0.16
GFAP-223ENST00000592706 ZNF831Q5JPB2 1677 aa14.03□□□□□ -0.16
GFAP-223ENST00000592706 NKX1-1Q15270 411 aaPredicted RBP14.02□□□□□ -0.17
GFAP-223ENST00000592706 SLC15A2Q16348 729 aa14.02□□□□□ -0.17
GFAP-223ENST00000592706 C4BP0C0L5 1744 aa14.01□□□□□ -0.17
GFAP-223ENST00000592706 PHKG2P15735 406 aa14.01□□□□□ -0.17
GFAP-223ENST00000592706 MTHFSP49914 203 aa14.01□□□□□ -0.17
GFAP-223ENST00000592706 IFNL2Q8IZJ0 200 aa14.01□□□□□ -0.17
GFAP-223ENST00000592706 PALLDQ8WX93 1383 aa14□□□□□ -0.17
GFAP-223ENST00000592706 IL13P35225 146 aa14□□□□□ -0.17
GFAP-223ENST00000592706 SPON1Q9HCB6 807 aa14□□□□□ -0.17
GFAP-223ENST00000592706 LRRC4BQ9NT99 713 aa14□□□□□ -0.17
GFAP-223ENST00000592706 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
GFAP-223ENST00000592706 ADAMTS7Q9UKP4 1686 aa13.99□□□□□ -0.17
GFAP-223ENST00000592706 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
GFAP-223ENST00000592706 AEBP1Q8IUX7 1158 aa13.99□□□□□ -0.17
GFAP-223ENST00000592706 COL5A3P25940 1745 aaPredicted RBP13.98□□□□□ -0.17
GFAP-223ENST00000592706 CICQ96RK0 1608 aaPredicted RBP13.98□□□□□ -0.17
GFAP-223ENST00000592706 HSP90AB1P08238 724 aaKnown RBP13.98□□□□□ -0.17
GFAP-223ENST00000592706 ZNF827Q17R98 1081 aa13.98□□□□□ -0.17
GFAP-223ENST00000592706 AMOTQ4VCS5 1084 aa13.98□□□□□ -0.17
GFAP-223ENST00000592706 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
GFAP-223ENST00000592706 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
GFAP-223ENST00000592706 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
GFAP-223ENST00000592706 KDM6AO15550 1401 aaPredicted RBP13.98□□□□□ -0.17
GFAP-223ENST00000592706 ZNF530Q6P9A1 599 aaPredicted RBP13.97□□□□□ -0.17
GFAP-223ENST00000592706 SMARCC1Q92922 1105 aaPredicted RBP13.97□□□□□ -0.17
GFAP-223ENST00000592706 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
GFAP-223ENST00000592706 TMOD3Q9NYL9 352 aa13.97□□□□□ -0.17
GFAP-223ENST00000592706 DIAPH1O60610 1272 aaKnown RBP13.96□□□□□ -0.17
GFAP-223ENST00000592706 HMGB2P26583 209 aaKnown RBP13.96□□□□□ -0.17
GFAP-223ENST00000592706 MRC1P22897 1456 aa13.95□□□□□ -0.18
GFAP-223ENST00000592706 CNGB1Q14028 1251 aaPredicted RBP13.95□□□□□ -0.18
GFAP-223ENST00000592706 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
GFAP-223ENST00000592706 PIGBQ92521 554 aa13.95□□□□□ -0.18
GFAP-223ENST00000592706 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
GFAP-223ENST00000592706 PDGFDQ9GZP0 370 aaPredicted RBP13.95□□□□□ -0.18
GFAP-223ENST00000592706 PPP1R1BQ9UD71 204 aaPredicted RBP13.95□□□□□ -0.18
GFAP-223ENST00000592706 ZBTB7AO95365 584 aa13.94□□□□□ -0.18
GFAP-223ENST00000592706 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
GFAP-223ENST00000592706 KCNQ4P56696 695 aa13.94□□□□□ -0.18
GFAP-223ENST00000592706 MTFR1LQ9H019 292 aa13.94□□□□□ -0.18
GFAP-223ENST00000592706 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
GFAP-223ENST00000592706 TJP1Q07157 1748 aa13.93□□□□□ -0.18
GFAP-223ENST00000592706 ERVV-2B6SEH9 535 aa13.93□□□□□ -0.18
GFAP-223ENST00000592706 PNPLA7Q6ZV29 1317 aa13.92□□□□□ -0.18
GFAP-223ENST00000592706 UBR2Q8IWV8 1755 aa13.92□□□□□ -0.18
GFAP-223ENST00000592706 HMOX1P09601 288 aa13.92□□□□□ -0.18
GFAP-223ENST00000592706 CFAP53Q96M91 514 aa13.92□□□□□ -0.18
GFAP-223ENST00000592706 TFCP2L1Q9NZI6 479 aa13.92□□□□□ -0.18
GFAP-223ENST00000592706 SLC16A10Q8TF71 515 aa13.91□□□□□ -0.18
GFAP-223ENST00000592706 C4AP0C0L4 1744 aa13.9□□□□□ -0.18
GFAP-223ENST00000592706 LOC102724428A0A0B4J2F2 783 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms