RNA–Protein interactions for RNA: ENST00000592628.5

TCF3-217, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-217ENST00000592628 JCADQ9P266 1359 aa20.38■□□□□ 0.85
TCF3-217ENST00000592628 GNAT3A8MTJ3 354 aa20.38■□□□□ 0.85
TCF3-217ENST00000592628 AMOTQ4VCS5 1084 aa20.38■□□□□ 0.85
TCF3-217ENST00000592628 LARP1Q6PKG0 1096 aaKnown RBP20.38■□□□□ 0.85
TCF3-217ENST00000592628 RAPGEF4Q8WZA2 1011 aa20.38■□□□□ 0.85
TCF3-217ENST00000592628 RTF1Q92541 710 aaKnown RBP20.38■□□□□ 0.85
TCF3-217ENST00000592628 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
TCF3-217ENST00000592628 HTATSF1O43719 755 aaKnown RBP20.37■□□□□ 0.85
TCF3-217ENST00000592628 LAS1LQ9Y4W2 734 aaKnown RBP20.37■□□□□ 0.85
TCF3-217ENST00000592628 MAP3K5Q99683 1374 aa20.37■□□□□ 0.85
TCF3-217ENST00000592628 ZNF853P0CG23 659 aa20.36■□□□□ 0.85
TCF3-217ENST00000592628 TATP17735 454 aaPredicted RBP20.36■□□□□ 0.85
TCF3-217ENST00000592628 IFT57Q9NWB7 429 aa20.36■□□□□ 0.85
TCF3-217ENST00000592628 MEGF6O75095 1541 aa20.36■□□□□ 0.85
TCF3-217ENST00000592628 CARD10Q9BWT7 1032 aa20.36■□□□□ 0.85
TCF3-217ENST00000592628 GNAI1P63096 354 aa20.35■□□□□ 0.85
TCF3-217ENST00000592628 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
TCF3-217ENST00000592628 RNF123Q5XPI4 1314 aa20.35■□□□□ 0.85
TCF3-217ENST00000592628 PLCH1Q4KWH8 1693 aa20.35■□□□□ 0.85
TCF3-217ENST00000592628 HSPA1LP34931 641 aa20.34■□□□□ 0.85
TCF3-217ENST00000592628 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
TCF3-217ENST00000592628 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
TCF3-217ENST00000592628 IL17REQ8NFR9 667 aa20.34■□□□□ 0.85
TCF3-217ENST00000592628 CRB1P82279 1406 aa20.34■□□□□ 0.85
TCF3-217ENST00000592628 EXOSC9Q06265 439 aaKnown RBP20.33■□□□□ 0.84
TCF3-217ENST00000592628 MBIPQ9NS73 344 aa20.32■□□□□ 0.84
TCF3-217ENST00000592628 NEFLP07196 543 aa20.31■□□□□ 0.84
TCF3-217ENST00000592628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.31■□□□□ 0.84
TCF3-217ENST00000592628 VIRMAQ69YN4 1812 aaKnown RBP20.31■□□□□ 0.84
TCF3-217ENST00000592628 PLEKHG2Q9H7P9 1386 aa20.31■□□□□ 0.84
TCF3-217ENST00000592628 FKBP8Q14318 412 aa20.31■□□□□ 0.84
TCF3-217ENST00000592628 C1orf141Q5JVX7 400 aa20.31■□□□□ 0.84
TCF3-217ENST00000592628 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
TCF3-217ENST00000592628 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
TCF3-217ENST00000592628 IRX6P78412 446 aaPredicted RBP20.3■□□□□ 0.84
TCF3-217ENST00000592628 SPG7Q9UQ90 795 aa20.3■□□□□ 0.84
TCF3-217ENST00000592628 PARP4Q9UKK3 1724 aaKnown RBP20.3■□□□□ 0.84
TCF3-217ENST00000592628 CHL1O00533 1208 aa20.29■□□□□ 0.84
TCF3-217ENST00000592628 LGR6Q9HBX8 967 aa20.29■□□□□ 0.84
TCF3-217ENST00000592628 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
TCF3-217ENST00000592628 NRAPQ86VF7 1730 aa20.29■□□□□ 0.84
TCF3-217ENST00000592628 OVOS2A0A0G2JMS6 1433 aa20.29■□□□□ 0.84
TCF3-217ENST00000592628 SPATA31A6Q5VVP1 1343 aa20.29■□□□□ 0.84
TCF3-217ENST00000592628 RRP1P56182 461 aaKnown RBP20.29■□□□□ 0.84
TCF3-217ENST00000592628 CEMIPQ8WUJ3 1361 aa20.28■□□□□ 0.84
TCF3-217ENST00000592628 IL2RBP14784 551 aa20.28■□□□□ 0.84
TCF3-217ENST00000592628 MPRIPQ6WCQ1 1025 aa20.28■□□□□ 0.84
TCF3-217ENST00000592628 NWD2Q9ULI1 1742 aa20.28■□□□□ 0.84
TCF3-217ENST00000592628 SLIT2O94813 1529 aa20.27■□□□□ 0.84
TCF3-217ENST00000592628 RNMTO43148 476 aaKnown RBP20.26■□□□□ 0.83
TCF3-217ENST00000592628 CT47B1P0C2W7 299 aaPredicted RBP20.26■□□□□ 0.83
TCF3-217ENST00000592628 PHKG2P15735 406 aa20.26■□□□□ 0.83
TCF3-217ENST00000592628 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
TCF3-217ENST00000592628 BCAR3O75815 825 aa20.26■□□□□ 0.83
TCF3-217ENST00000592628 RARSP54136 660 aaKnown RBP20.26■□□□□ 0.83
TCF3-217ENST00000592628 LRP6O75581 1613 aa20.25■□□□□ 0.83
TCF3-217ENST00000592628 CYP27B1O15528 508 aa20.25■□□□□ 0.83
TCF3-217ENST00000592628 IFNL2Q8IZJ0 200 aa20.25■□□□□ 0.83
TCF3-217ENST00000592628 ZCRB1Q8TBF4 217 aaKnown RBP20.25■□□□□ 0.83
TCF3-217ENST00000592628 PLIN1O60240 522 aa20.24■□□□□ 0.83
TCF3-217ENST00000592628 TAF7Q15545 349 aaPredicted RBP20.24■□□□□ 0.83
TCF3-217ENST00000592628 ADAMTS7Q9UKP4 1686 aa20.24■□□□□ 0.83
TCF3-217ENST00000592628 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
TCF3-217ENST00000592628 C8orf37Q96NL8 207 aa20.23■□□□□ 0.83
TCF3-217ENST00000592628 TSPYL4Q9UJ04 414 aa20.23■□□□□ 0.83
TCF3-217ENST00000592628 C8orf58Q8NAV2 365 aa20.23■□□□□ 0.83
TCF3-217ENST00000592628 NGLY1Q96IV0 654 aa20.23■□□□□ 0.83
TCF3-217ENST00000592628 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
TCF3-217ENST00000592628 SHANK3Q9BYB0 1731 aa20.22■□□□□ 0.83
TCF3-217ENST00000592628 ELL2O00472 640 aaPredicted RBP20.21■□□□□ 0.83
TCF3-217ENST00000592628 VAMP4O75379 141 aa20.21■□□□□ 0.83
TCF3-217ENST00000592628 DISP2A7MBM2 1401 aa20.21■□□□□ 0.83
TCF3-217ENST00000592628 TEFQ10587 303 aa20.21■□□□□ 0.83
TCF3-217ENST00000592628 BABAM1Q9NWV8 329 aa20.21■□□□□ 0.83
TCF3-217ENST00000592628 SPATA31A1Q5TZJ5 1347 aa20.2■□□□□ 0.82
TCF3-217ENST00000592628 KDM6AO15550 1401 aaPredicted RBP20.2■□□□□ 0.82
TCF3-217ENST00000592628 KRT24Q2M2I5 525 aa20.2■□□□□ 0.82
TCF3-217ENST00000592628 TWISTNBQ3B726 338 aaPredicted RBP20.2■□□□□ 0.82
TCF3-217ENST00000592628 UNC5CLQ8IV45 518 aa20.2■□□□□ 0.82
TCF3-217ENST00000592628 BCL2L13Q9BXK5 485 aa20.2■□□□□ 0.82
TCF3-217ENST00000592628 PCDH11XQ9BZA7 1347 aa20.2■□□□□ 0.82
TCF3-217ENST00000592628 PCDH11YQ9BZA8 1340 aa20.2■□□□□ 0.82
TCF3-217ENST00000592628 WNK3Q9BYP7 1800 aa20.19■□□□□ 0.82
TCF3-217ENST00000592628 FNBP4Q8N3X1 1017 aaPredicted RBP20.19■□□□□ 0.82
TCF3-217ENST00000592628 SIPA1L3O60292 1781 aaPredicted RBP20.19■□□□□ 0.82
TCF3-217ENST00000592628 BCL9LQ86UU0 1499 aa20.19■□□□□ 0.82
TCF3-217ENST00000592628 SSH1Q8WYL5 1049 aa20.18■□□□□ 0.82
TCF3-217ENST00000592628 DCAF5Q96JK2 942 aa20.18■□□□□ 0.82
TCF3-217ENST00000592628 SPATA31A5Q5VU36 1347 aa20.18■□□□□ 0.82
TCF3-217ENST00000592628 SPATA31A7Q8IWB4 1347 aa20.18■□□□□ 0.82
TCF3-217ENST00000592628 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
TCF3-217ENST00000592628 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.18■□□□□ 0.82
TCF3-217ENST00000592628 DDX54Q8TDD1 881 aaKnown RBP20.17■□□□□ 0.82
TCF3-217ENST00000592628 THRAP3Q9Y2W1 955 aaKnown RBP20.17■□□□□ 0.82
TCF3-217ENST00000592628 KDM3BQ7LBC6 1761 aa20.17■□□□□ 0.82
TCF3-217ENST00000592628 ZNF428Q96B54 188 aa20.16■□□□□ 0.82
TCF3-217ENST00000592628 CCDC9Q9Y3X0 531 aaKnown RBP20.16■□□□□ 0.82
TCF3-217ENST00000592628 BTBD11A6QL63 1104 aa20.16■□□□□ 0.82
TCF3-217ENST00000592628 ALDH1L2Q3SY69 923 aa20.16■□□□□ 0.82
TCF3-217ENST00000592628 MEX3CQ5U5Q3 659 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms