RNA–Protein interactions for RNA: ENST00000592597.1

POLR2E-210, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-210ENST00000592597 NME9Q86XW9 330 aa21.96■■□□□ 1.11
POLR2E-210ENST00000592597 LTV1Q96GA3 475 aaPredicted RBP21.96■■□□□ 1.11
POLR2E-210ENST00000592597 CD2APQ9Y5K6 639 aa21.95■■□□□ 1.1
POLR2E-210ENST00000592597 NSD2O96028 1365 aa21.95■■□□□ 1.1
POLR2E-210ENST00000592597 DNAJC5GQ8N7S2 189 aa21.94■■□□□ 1.1
POLR2E-210ENST00000592597 MON2Q7Z3U7 1717 aa21.94■■□□□ 1.1
POLR2E-210ENST00000592597 ANKRD36BQ8N2N9 1353 aa21.93■■□□□ 1.1
POLR2E-210ENST00000592597 PCNTO95613 3336 aa21.92■■□□□ 1.1
POLR2E-210ENST00000592597 RGPD2P0DJD1 1756 aa21.92■■□□□ 1.1
POLR2E-210ENST00000592597 APLP1P51693 650 aa21.91■■□□□ 1.1
POLR2E-210ENST00000592597 IGSF1Q8N6C5 1336 aa21.9■■□□□ 1.1
POLR2E-210ENST00000592597 COL13A1Q5TAT6 717 aaPredicted RBP21.9■■□□□ 1.1
POLR2E-210ENST00000592597 USP31Q70CQ4 1352 aa21.89■■□□□ 1.1
POLR2E-210ENST00000592597 C5P01031 1676 aa21.89■■□□□ 1.1
POLR2E-210ENST00000592597 SMIM5Q71RC9 77 aa21.88■■□□□ 1.09
POLR2E-210ENST00000592597 USP54Q70EL1 1684 aa21.88■■□□□ 1.09
POLR2E-210ENST00000592597 TAF1LQ8IZX4 1826 aa21.87■■□□□ 1.09
POLR2E-210ENST00000592597 USP47Q96K76 1375 aa21.87■■□□□ 1.09
POLR2E-210ENST00000592597 HTRA3P83110 453 aa21.86■■□□□ 1.09
POLR2E-210ENST00000592597 ZCRB1Q8TBF4 217 aaKnown RBP21.85■■□□□ 1.09
POLR2E-210ENST00000592597 TRIM26Q12899 539 aaPredicted RBP21.84■■□□□ 1.09
POLR2E-210ENST00000592597 AMIGO3Q86WK7 504 aa21.84■■□□□ 1.09
POLR2E-210ENST00000592597 SBNO2Q9Y2G9 1366 aa21.84■■□□□ 1.09
POLR2E-210ENST00000592597 WDR90Q96KV7 1748 aa21.83■■□□□ 1.09
POLR2E-210ENST00000592597 IP6K1Q92551 441 aa21.83■■□□□ 1.09
POLR2E-210ENST00000592597 FAM208AQ9UK61 1670 aaKnown RBP21.82■■□□□ 1.08
POLR2E-210ENST00000592597 TOMM70O94826 608 aa21.82■■□□□ 1.08
POLR2E-210ENST00000592597 FBLN1P23142 703 aa21.81■■□□□ 1.08
POLR2E-210ENST00000592597 TMC1Q8TDI8 760 aa21.81■■□□□ 1.08
POLR2E-210ENST00000592597 CD163L1Q9NR16 1453 aa21.81■■□□□ 1.08
POLR2E-210ENST00000592597 MEGF6O75095 1541 aa21.8■■□□□ 1.08
POLR2E-210ENST00000592597 PHF14O94880 888 aa21.8■■□□□ 1.08
POLR2E-210ENST00000592597 NMRK2Q9NPI5 230 aa21.8■■□□□ 1.08
POLR2E-210ENST00000592597 FLAD1Q8NFF5 587 aa21.79■■□□□ 1.08
POLR2E-210ENST00000592597 TOGARAM1Q9Y4F4 1720 aa21.79■■□□□ 1.08
POLR2E-210ENST00000592597 UBR3Q6ZT12 1888 aa21.78■■□□□ 1.08
POLR2E-210ENST00000592597 SLC12A5Q9H2X9 1139 aa21.77■■□□□ 1.08
POLR2E-210ENST00000592597 C4BP0C0L5 1744 aa21.77■■□□□ 1.08
POLR2E-210ENST00000592597 N4BP2Q86UW6 1770 aaPredicted RBP21.76■■□□□ 1.07
POLR2E-210ENST00000592597 TNS4Q8IZW8 715 aa21.76■■□□□ 1.07
POLR2E-210ENST00000592597 USHBP1Q8N6Y0 703 aa21.76■■□□□ 1.07
POLR2E-210ENST00000592597 L3MBTL2Q969R5 705 aa21.76■■□□□ 1.07
POLR2E-210ENST00000592597 PCGF6Q9BYE7 350 aa21.76■■□□□ 1.07
POLR2E-210ENST00000592597 MPRIPQ6WCQ1 1025 aa21.75■■□□□ 1.07
POLR2E-210ENST00000592597 KLRG1Q96E93 195 aa21.75■■□□□ 1.07
POLR2E-210ENST00000592597 AK7Q96M32 723 aa21.75■■□□□ 1.07
POLR2E-210ENST00000592597 PALLDQ8WX93 1383 aa21.74■■□□□ 1.07
POLR2E-210ENST00000592597 HDGFL2Q7Z4V5 671 aaPredicted RBP21.74■■□□□ 1.07
POLR2E-210ENST00000592597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.73■■□□□ 1.07
POLR2E-210ENST00000592597 HOXC9P31274 260 aa21.73■■□□□ 1.07
POLR2E-210ENST00000592597 MAP3K19Q56UN5 1328 aa21.73■■□□□ 1.07
POLR2E-210ENST00000592597 ITGB4P16144 1822 aa21.73■■□□□ 1.07
POLR2E-210ENST00000592597 ROCK2O75116 1388 aaKnown RBP21.73■■□□□ 1.07
POLR2E-210ENST00000592597 AMPHP49418 695 aa21.72■■□□□ 1.07
POLR2E-210ENST00000592597 CICQ96RK0 1608 aaPredicted RBP21.72■■□□□ 1.07
POLR2E-210ENST00000592597 PRELPP51888 382 aa21.71■■□□□ 1.07
POLR2E-210ENST00000592597 NBPF6Q5VWK0 638 aa21.71■■□□□ 1.07
POLR2E-210ENST00000592597 NBPF4Q96M43 638 aa21.71■■□□□ 1.07
POLR2E-210ENST00000592597 BCS1LQ9Y276 419 aa21.71■■□□□ 1.07
POLR2E-210ENST00000592597 ARHGAP27Q6ZUM4 889 aa21.7■■□□□ 1.06
POLR2E-210ENST00000592597 JMYQ8N9B5 988 aa21.7■■□□□ 1.06
POLR2E-210ENST00000592597 EDC4Q6P2E9 1401 aaKnown RBP21.7■■□□□ 1.06
POLR2E-210ENST00000592597 KIAA1551Q9HCM1 1747 aa21.69■■□□□ 1.06
POLR2E-210ENST00000592597 A0A0G2JLW4 131 aa21.68■■□□□ 1.06
POLR2E-210ENST00000592597 A0A1W2PP64 1363 aa21.68■■□□□ 1.06
POLR2E-210ENST00000592597 PXDNLA1KZ92 1463 aa21.67■■□□□ 1.06
POLR2E-210ENST00000592597 RBM46Q8TBY0 533 aaKnown RBP21.67■■□□□ 1.06
POLR2E-210ENST00000592597 C16orf71Q8IYS4 520 aaPredicted RBP21.66■■□□□ 1.06
POLR2E-210ENST00000592597 KIF13BQ9NQT8 1826 aa21.65■■□□□ 1.06
POLR2E-210ENST00000592597 MMP10P09238 476 aa21.65■■□□□ 1.06
POLR2E-210ENST00000592597 LINC00116Q8NCU8 138 aa21.65■■□□□ 1.06
POLR2E-210ENST00000592597 RAPGEF4Q8WZA2 1011 aa21.65■■□□□ 1.06
POLR2E-210ENST00000592597 TERF2IPQ9NYB0 399 aa21.64■■□□□ 1.05
POLR2E-210ENST00000592597 TATP17735 454 aaPredicted RBP21.63■■□□□ 1.05
POLR2E-210ENST00000592597 RRS1Q15050 365 aaKnown RBP21.63■■□□□ 1.05
POLR2E-210ENST00000592597 COG3Q96JB2 828 aa21.63■■□□□ 1.05
POLR2E-210ENST00000592597 MAP2P11137 1827 aaKnown RBP21.63■■□□□ 1.05
POLR2E-210ENST00000592597 CYP27B1O15528 508 aa21.62■■□□□ 1.05
POLR2E-210ENST00000592597 SSFA2P28290 1259 aa21.62■■□□□ 1.05
POLR2E-210ENST00000592597 C9orf131Q5VYM1 1079 aa21.62■■□□□ 1.05
POLR2E-210ENST00000592597 SIN3AQ96ST3 1273 aa21.62■■□□□ 1.05
POLR2E-210ENST00000592597 GNPATO15228 680 aa21.61■■□□□ 1.05
POLR2E-210ENST00000592597 FCHSD2O94868 740 aa21.61■■□□□ 1.05
POLR2E-210ENST00000592597 PIGBQ92521 554 aa21.61■■□□□ 1.05
POLR2E-210ENST00000592597 SMARCC1Q92922 1105 aaPredicted RBP21.61■■□□□ 1.05
POLR2E-210ENST00000592597 KCPQ6ZWJ8 1503 aa21.6■■□□□ 1.05
POLR2E-210ENST00000592597 PCDH11XQ9BZA7 1347 aa21.6■■□□□ 1.05
POLR2E-210ENST00000592597 PCDH11YQ9BZA8 1340 aa21.6■■□□□ 1.05
POLR2E-210ENST00000592597 DPEP1P16444 411 aa21.6■■□□□ 1.05
POLR2E-210ENST00000592597 HMGB2P26583 209 aaKnown RBP21.6■■□□□ 1.05
POLR2E-210ENST00000592597 RRAGCQ9HB90 399 aa21.6■■□□□ 1.05
POLR2E-210ENST00000592597 BRCA1P38398 1863 aaKnown RBP21.6■■□□□ 1.05
POLR2E-210ENST00000592597 CGNL1Q0VF96 1302 aa21.59■■□□□ 1.05
POLR2E-210ENST00000592597 NSD3Q9BZ95 1437 aa21.58■■□□□ 1.05
POLR2E-210ENST00000592597 TGFB2P61812 414 aa21.58■■□□□ 1.05
POLR2E-210ENST00000592597 FSTL1Q12841 308 aa21.58■■□□□ 1.05
POLR2E-210ENST00000592597 ITPK1Q13572 414 aa21.58■■□□□ 1.05
POLR2E-210ENST00000592597 PKD1L3Q7Z443 1732 aa21.58■■□□□ 1.04
POLR2E-210ENST00000592597 LOC102724428A0A0B4J2F2 783 aa21.57■■□□□ 1.04
POLR2E-210ENST00000592597 SIK1P57059 783 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms