RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 TNRQ92752 1358 aa14.44□□□□□ -0.1
ZNF540-210ENST00000592533 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
ZNF540-210ENST00000592533 ELL2O00472 640 aaPredicted RBP14.44□□□□□ -0.1
ZNF540-210ENST00000592533 GSPT1P15170 499 aaKnown RBP14.44□□□□□ -0.1
ZNF540-210ENST00000592533 TNPO1Q92973 898 aaKnown RBP14.44□□□□□ -0.1
ZNF540-210ENST00000592533 ANO8Q9HCE9 1232 aaPredicted RBP14.44□□□□□ -0.1
ZNF540-210ENST00000592533 TTC21BQ7Z4L5 1316 aa14.44□□□□□ -0.1
ZNF540-210ENST00000592533 HSP90AB1P08238 724 aaKnown RBP14.44□□□□□ -0.1
ZNF540-210ENST00000592533 CYB5RLQ6IPT4 315 aa14.44□□□□□ -0.1
ZNF540-210ENST00000592533 NCKAP5LQ9HCH0 1330 aa14.43□□□□□ -0.1
ZNF540-210ENST00000592533 RPAP2Q8IXW5 612 aaPredicted RBP14.43□□□□□ -0.1
ZNF540-210ENST00000592533 ARHGEF10O15013 1369 aa14.43□□□□□ -0.1
ZNF540-210ENST00000592533 MRE11P49959 708 aa14.43□□□□□ -0.1
ZNF540-210ENST00000592533 TTC22Q5TAA0 569 aa14.43□□□□□ -0.1
ZNF540-210ENST00000592533 GBP4Q96PP9 640 aa14.43□□□□□ -0.1
ZNF540-210ENST00000592533 FAM208AQ9UK61 1670 aaKnown RBP14.43□□□□□ -0.1
ZNF540-210ENST00000592533 PLEKHG1Q9ULL1 1385 aa14.42□□□□□ -0.1
ZNF540-210ENST00000592533 CD2BP2O95400 341 aaKnown RBP14.42□□□□□ -0.1
ZNF540-210ENST00000592533 RTL1A6NKG5 1358 aa14.42□□□□□ -0.1
ZNF540-210ENST00000592533 SKOR2Q2VWA4 1001 aaPredicted RBP14.41□□□□□ -0.1
ZNF540-210ENST00000592533 DCTN1Q14203 1278 aa14.41□□□□□ -0.1
ZNF540-210ENST00000592533 AEBP1Q8IUX7 1158 aa14.41□□□□□ -0.1
ZNF540-210ENST00000592533 MSH6P52701 1360 aa14.4□□□□□ -0.1
ZNF540-210ENST00000592533 SULT6B1Q6IMI4 303 aa14.4□□□□□ -0.1
ZNF540-210ENST00000592533 CEP85Q6P2H3 762 aa14.4□□□□□ -0.1
ZNF540-210ENST00000592533 XRN1Q8IZH2 1706 aaKnown RBP14.4□□□□□ -0.1
ZNF540-210ENST00000592533 RABEP1Q15276 862 aa14.4□□□□□ -0.1
ZNF540-210ENST00000592533 KDRP35968 1356 aa14.4□□□□□ -0.1
ZNF540-210ENST00000592533 MARF1Q9Y4F3 1742 aaKnown RBP14.39□□□□□ -0.11
ZNF540-210ENST00000592533 ACEP12821 1306 aa14.39□□□□□ -0.11
ZNF540-210ENST00000592533 PIK3C2AO00443 1686 aa14.38□□□□□ -0.11
ZNF540-210ENST00000592533 AK9Q5TCS8 1911 aa14.38□□□□□ -0.11
ZNF540-210ENST00000592533 RGPD8O14715 1765 aaPredicted RBP14.38□□□□□ -0.11
ZNF540-210ENST00000592533 RRAGDQ9NQL2 400 aaPredicted RBP14.38□□□□□ -0.11
ZNF540-210ENST00000592533 IBTKQ9P2D0 1353 aaPredicted RBP14.38□□□□□ -0.11
ZNF540-210ENST00000592533 USP26Q9BXU7 913 aa14.37□□□□□ -0.11
ZNF540-210ENST00000592533 GZF1Q9H116 711 aaPredicted RBP14.37□□□□□ -0.11
ZNF540-210ENST00000592533 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
ZNF540-210ENST00000592533 GRPEL1Q9HAV7 217 aa14.37□□□□□ -0.11
ZNF540-210ENST00000592533 PTPRUQ92729 1446 aa14.37□□□□□ -0.11
ZNF540-210ENST00000592533 DIP2AQ14689 1571 aa14.37□□□□□ -0.11
ZNF540-210ENST00000592533 MLECQ14165 292 aa14.37□□□□□ -0.11
ZNF540-210ENST00000592533 GAS2L2Q8NHY3 880 aa14.37□□□□□ -0.11
ZNF540-210ENST00000592533 SLIT1O75093 1534 aa14.36□□□□□ -0.11
ZNF540-210ENST00000592533 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
ZNF540-210ENST00000592533 PANK2Q9BZ23 570 aa14.36□□□□□ -0.11
ZNF540-210ENST00000592533 SBNO1A3KN83 1393 aa14.36□□□□□ -0.11
ZNF540-210ENST00000592533 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
ZNF540-210ENST00000592533 MCM10Q7L590 875 aa14.35□□□□□ -0.11
ZNF540-210ENST00000592533 ARHGAP23Q9P227 1491 aa14.35□□□□□ -0.11
ZNF540-210ENST00000592533 FLT4P35916 1363 aa14.35□□□□□ -0.11
ZNF540-210ENST00000592533 KRT24Q2M2I5 525 aa14.35□□□□□ -0.11
ZNF540-210ENST00000592533 HSP90AB2PQ58FF8 381 aa14.34□□□□□ -0.11
ZNF540-210ENST00000592533 ESF1Q9H501 851 aaKnown RBP14.34□□□□□ -0.11
ZNF540-210ENST00000592533 CYP2E1P05181 493 aaPredicted RBP14.34□□□□□ -0.11
ZNF540-210ENST00000592533 HSP90AA1P07900 732 aaKnown RBP14.34□□□□□ -0.11
ZNF540-210ENST00000592533 CEP170BQ9Y4F5 1589 aaPredicted RBP14.33□□□□□ -0.11
ZNF540-210ENST00000592533 SDSP20132 328 aa14.33□□□□□ -0.11
ZNF540-210ENST00000592533 C16orf71Q8IYS4 520 aaPredicted RBP14.33□□□□□ -0.11
ZNF540-210ENST00000592533 MEIS3Q99687 375 aa14.33□□□□□ -0.11
ZNF540-210ENST00000592533 MAP3K19Q56UN5 1328 aa14.33□□□□□ -0.12
ZNF540-210ENST00000592533 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
ZNF540-210ENST00000592533 IGSF1Q8N6C5 1336 aa14.33□□□□□ -0.12
ZNF540-210ENST00000592533 PXDNLA1KZ92 1463 aa14.33□□□□□ -0.12
ZNF540-210ENST00000592533 CLCN1P35523 988 aa14.32□□□□□ -0.12
ZNF540-210ENST00000592533 CASC1Q6TDU7 716 aa14.32□□□□□ -0.12
ZNF540-210ENST00000592533 NWD1Q149M9 1564 aa14.32□□□□□ -0.12
ZNF540-210ENST00000592533 SOS1Q07889 1333 aaPredicted RBP14.32□□□□□ -0.12
ZNF540-210ENST00000592533 HTATSF1O43719 755 aaKnown RBP14.32□□□□□ -0.12
ZNF540-210ENST00000592533 HMMRO75330 724 aa14.32□□□□□ -0.12
ZNF540-210ENST00000592533 SSFA2P28290 1259 aa14.32□□□□□ -0.12
ZNF540-210ENST00000592533 OTUD7AQ8TE49 926 aaPredicted RBP14.32□□□□□ -0.12
ZNF540-210ENST00000592533 NUCB2P80303 420 aa14.31□□□□□ -0.12
ZNF540-210ENST00000592533 KLHL40Q2TBA0 621 aa14.31□□□□□ -0.12
ZNF540-210ENST00000592533 GOLGA6L22H0YM25 854 aa14.31□□□□□ -0.12
ZNF540-210ENST00000592533 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
ZNF540-210ENST00000592533 CWC22Q9HCG8 908 aaKnown RBP14.31□□□□□ -0.12
ZNF540-210ENST00000592533 SALL3Q9BXA9 1300 aa14.31□□□□□ -0.12
ZNF540-210ENST00000592533 REC8O95072 547 aa14.3□□□□□ -0.12
ZNF540-210ENST00000592533 BAG4O95429 457 aaKnown RBP14.3□□□□□ -0.12
ZNF540-210ENST00000592533 GAS2L3Q86XJ1 694 aa14.3□□□□□ -0.12
ZNF540-210ENST00000592533 LTKP29376 864 aa14.3□□□□□ -0.12
ZNF540-210ENST00000592533 MTHFSDQ2M296 383 aaKnown RBP14.3□□□□□ -0.12
ZNF540-210ENST00000592533 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.29□□□□□ -0.12
ZNF540-210ENST00000592533 ANKARQ7Z5J8 1434 aa14.29□□□□□ -0.12
ZNF540-210ENST00000592533 ERC2O15083 957 aa14.28□□□□□ -0.12
ZNF540-210ENST00000592533 IL17RAQ96F46 866 aa14.28□□□□□ -0.12
ZNF540-210ENST00000592533 TSPYL4Q9UJ04 414 aa14.28□□□□□ -0.12
ZNF540-210ENST00000592533 SMARCA5O60264 1052 aaPredicted RBP14.28□□□□□ -0.12
ZNF540-210ENST00000592533 ST18O60284 1047 aa14.28□□□□□ -0.12
ZNF540-210ENST00000592533 PDE1AP54750 535 aa14.28□□□□□ -0.12
ZNF540-210ENST00000592533 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
ZNF540-210ENST00000592533 BABAM1Q9NWV8 329 aa14.28□□□□□ -0.12
ZNF540-210ENST00000592533 RTF1Q92541 710 aaKnown RBP14.27□□□□□ -0.12
ZNF540-210ENST00000592533 G2E3Q7L622 706 aa14.27□□□□□ -0.13
ZNF540-210ENST00000592533 GNAI2P04899 355 aa14.26□□□□□ -0.13
ZNF540-210ENST00000592533 ARXQ96QS3 562 aa14.26□□□□□ -0.13
ZNF540-210ENST00000592533 MED1Q15648 1581 aaPredicted RBP14.26□□□□□ -0.13
ZNF540-210ENST00000592533 TBX22Q9Y458 520 aa14.26□□□□□ -0.13
ZNF540-210ENST00000592533 FOXO3O43524 673 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms