RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 ACSBG1Q96GR2 724 aa14.15□□□□□ -0.14
VMP1-214ENST00000592106 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
VMP1-214ENST00000592106 CASZ1Q86V15 1759 aa14.14□□□□□ -0.15
VMP1-214ENST00000592106 HOXC9P31274 260 aa14.14□□□□□ -0.15
VMP1-214ENST00000592106 TIMELESSQ9UNS1 1208 aa14.14□□□□□ -0.15
VMP1-214ENST00000592106 KIF20BQ96Q89 1820 aa14.13□□□□□ -0.15
VMP1-214ENST00000592106 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
VMP1-214ENST00000592106 SLC15A2Q16348 729 aa14.12□□□□□ -0.15
VMP1-214ENST00000592106 BTAF1O14981 1849 aa14.12□□□□□ -0.15
VMP1-214ENST00000592106 PROM2Q8N271 834 aa14.11□□□□□ -0.15
VMP1-214ENST00000592106 DDX54Q8TDD1 881 aaKnown RBP14.1□□□□□ -0.15
VMP1-214ENST00000592106 GGNBP2Q9H3C7 697 aa14.1□□□□□ -0.15
VMP1-214ENST00000592106 KIF24Q5T7B8 1368 aa14.09□□□□□ -0.15
VMP1-214ENST00000592106 PAPPAQ13219 1627 aa14.09□□□□□ -0.15
VMP1-214ENST00000592106 FYB1O15117 783 aa14.09□□□□□ -0.15
VMP1-214ENST00000592106 ZBTB7AO95365 584 aa14.09□□□□□ -0.15
VMP1-214ENST00000592106 CGNL1Q0VF96 1302 aa14.09□□□□□ -0.15
VMP1-214ENST00000592106 RRS1Q15050 365 aaKnown RBP14.08□□□□□ -0.16
VMP1-214ENST00000592106 SLC27A3Q5K4L6 730 aa14.08□□□□□ -0.16
VMP1-214ENST00000592106 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.16
VMP1-214ENST00000592106 MTFR1LQ9H019 292 aa14.08□□□□□ -0.16
VMP1-214ENST00000592106 FLT4P35916 1363 aa14.08□□□□□ -0.16
VMP1-214ENST00000592106 NSD3Q9BZ95 1437 aa14.07□□□□□ -0.16
VMP1-214ENST00000592106 DOT1LQ8TEK3 1739 aa14.07□□□□□ -0.16
VMP1-214ENST00000592106 MEGF6O75095 1541 aa14.07□□□□□ -0.16
VMP1-214ENST00000592106 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
VMP1-214ENST00000592106 SYTL4Q96C24 671 aaPredicted RBP14.07□□□□□ -0.16
VMP1-214ENST00000592106 MYOM1P52179 1685 aa14.07□□□□□ -0.16
VMP1-214ENST00000592106 INSRP06213 1382 aa14.07□□□□□ -0.16
VMP1-214ENST00000592106 KAT6BQ8WYB5 2073 aa14.06□□□□□ -0.16
VMP1-214ENST00000592106 TATP17735 454 aaPredicted RBP14.06□□□□□ -0.16
VMP1-214ENST00000592106 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
VMP1-214ENST00000592106 RGPD2P0DJD1 1756 aa14.05□□□□□ -0.16
VMP1-214ENST00000592106 FBLN1P23142 703 aa14.04□□□□□ -0.16
VMP1-214ENST00000592106 YY1P25490 414 aa14.04□□□□□ -0.16
VMP1-214ENST00000592106 HMGB2P26583 209 aaKnown RBP14.04□□□□□ -0.16
VMP1-214ENST00000592106 PCGF6Q9BYE7 350 aa14.04□□□□□ -0.16
VMP1-214ENST00000592106 PDGFDQ9GZP0 370 aaPredicted RBP14.04□□□□□ -0.16
VMP1-214ENST00000592106 PCDH11XQ9BZA7 1347 aa14.04□□□□□ -0.16
VMP1-214ENST00000592106 PCDH11YQ9BZA8 1340 aa14.04□□□□□ -0.16
VMP1-214ENST00000592106 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
VMP1-214ENST00000592106 PTGER2P43116 358 aa14.03□□□□□ -0.16
VMP1-214ENST00000592106 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
VMP1-214ENST00000592106 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
VMP1-214ENST00000592106 QSER1Q2KHR3 1735 aa14.03□□□□□ -0.16
VMP1-214ENST00000592106 PRIM1P49642 420 aaKnown RBP14.02□□□□□ -0.17
VMP1-214ENST00000592106 ZNF827Q17R98 1081 aa14.02□□□□□ -0.17
VMP1-214ENST00000592106 USHBP1Q8N6Y0 703 aa14.02□□□□□ -0.17
VMP1-214ENST00000592106 SLC16A10Q8TF71 515 aa14.02□□□□□ -0.17
VMP1-214ENST00000592106 LRRC4BQ9NT99 713 aa14.01□□□□□ -0.17
VMP1-214ENST00000592106 LY75O60449 1722 aa14.01□□□□□ -0.17
VMP1-214ENST00000592106 NSD2O96028 1365 aa14□□□□□ -0.17
VMP1-214ENST00000592106 POLD1P28340 1107 aa14□□□□□ -0.17
VMP1-214ENST00000592106 HSP90AB2PQ58FF8 381 aa14□□□□□ -0.17
VMP1-214ENST00000592106 AKT1S1Q96B36 256 aa14□□□□□ -0.17
VMP1-214ENST00000592106 POLR3GLQ9BT43 218 aa14□□□□□ -0.17
VMP1-214ENST00000592106 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
VMP1-214ENST00000592106 FHDC1Q9C0D6 1143 aaPredicted RBP14□□□□□ -0.17
VMP1-214ENST00000592106 TFCP2L1Q9NZI6 479 aa14□□□□□ -0.17
VMP1-214ENST00000592106 ANKRD26Q9UPS8 1709 aa13.99□□□□□ -0.17
VMP1-214ENST00000592106 ARXQ96QS3 562 aa13.99□□□□□ -0.17
VMP1-214ENST00000592106 CARD14Q9BXL6 1004 aa13.99□□□□□ -0.17
VMP1-214ENST00000592106 CCNL1Q9UK58 526 aaPredicted RBP13.99□□□□□ -0.17
VMP1-214ENST00000592106 MAP3K5Q99683 1374 aa13.98□□□□□ -0.17
VMP1-214ENST00000592106 PPM1GO15355 546 aaPredicted RBP13.98□□□□□ -0.17
VMP1-214ENST00000592106 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.17
VMP1-214ENST00000592106 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
VMP1-214ENST00000592106 EMILIN1Q9Y6C2 1016 aa13.98□□□□□ -0.17
VMP1-214ENST00000592106 IFFO2Q5TF58 517 aa13.97□□□□□ -0.17
VMP1-214ENST00000592106 SYT17Q9BSW7 474 aa13.97□□□□□ -0.17
VMP1-214ENST00000592106 PKD1L3Q7Z443 1732 aa13.97□□□□□ -0.17
VMP1-214ENST00000592106 NCAPD2Q15021 1401 aa13.97□□□□□ -0.17
VMP1-214ENST00000592106 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
VMP1-214ENST00000592106 PNPLA7Q6ZV29 1317 aa13.96□□□□□ -0.17
VMP1-214ENST00000592106 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
VMP1-214ENST00000592106 TUBGCP6Q96RT7 1819 aa13.95□□□□□ -0.18
VMP1-214ENST00000592106 CCER1Q8TC90 406 aaPredicted RBP13.95□□□□□ -0.18
VMP1-214ENST00000592106 SMARCC1Q92922 1105 aaPredicted RBP13.95□□□□□ -0.18
VMP1-214ENST00000592106 PALLDQ8WX93 1383 aa13.95□□□□□ -0.18
VMP1-214ENST00000592106 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
VMP1-214ENST00000592106 C5P01031 1676 aa13.94□□□□□ -0.18
VMP1-214ENST00000592106 PLEKHG2Q9H7P9 1386 aa13.94□□□□□ -0.18
VMP1-214ENST00000592106 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
VMP1-214ENST00000592106 KCNQ4P56696 695 aa13.93□□□□□ -0.18
VMP1-214ENST00000592106 MPRIPQ6WCQ1 1025 aa13.93□□□□□ -0.18
VMP1-214ENST00000592106 FLAD1Q8NFF5 587 aa13.93□□□□□ -0.18
VMP1-214ENST00000592106 COL24A1Q17RW2 1714 aa13.93□□□□□ -0.18
VMP1-214ENST00000592106 SPDYE2BA6NHP3 402 aa13.92□□□□□ -0.18
VMP1-214ENST00000592106 CYP27B1O15528 508 aa13.92□□□□□ -0.18
VMP1-214ENST00000592106 SPDYE6P0CI01 402 aa13.92□□□□□ -0.18
VMP1-214ENST00000592106 HSPA5P11021 654 aaKnown RBP13.92□□□□□ -0.18
VMP1-214ENST00000592106 SPDYE2Q495Y8 402 aa13.92□□□□□ -0.18
VMP1-214ENST00000592106 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.92□□□□□ -0.181e-9■■□□□ 13.6
VMP1-214ENST00000592106 TOGARAM1Q9Y4F4 1720 aa13.92□□□□□ -0.18
VMP1-214ENST00000592106 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
VMP1-214ENST00000592106 ITGB4P16144 1822 aa13.9□□□□□ -0.18
VMP1-214ENST00000592106 GPR162Q16538 588 aa13.9□□□□□ -0.18
VMP1-214ENST00000592106 AK7Q96M32 723 aa13.9□□□□□ -0.18
VMP1-214ENST00000592106 EYA1Q99502 592 aa13.9□□□□□ -0.18
VMP1-214ENST00000592106 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms